DK956843 |
Clone id |
TST39A01NGRL0026_M21 |
Library |
TST39 |
Length |
540 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0026_M21. 5' end sequence. |
Accession |
DK956843 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL13Contig1 |
Sequence |
CACTCCCAGAAGTTGGAGTGCTGCGCGGCCAAGCTCAGATCCAGGTATTGGGTGTACCTC TGTAAAGGATTTTTACATTGGGAGTAGTTTTACAAGTCAGCCAAAATGGTGAAGTTTACA ACTGAAGAGCTGCGTAGGATCATGGACAAGAAGAACAACATTAGGAATATGTCTGTTATC GCCCATGTGGATCATGGGAAATCTACCTTAACAGACTCTCTTGTGGCTGCTGCTGGTATC ATTGCTCAAGAGGTCGCTGGAGATGTGCGCCTGACAGACACCCGTCAAGATGAGGCTGAA CGTGGCATTACCATCAAATCTACTGGGATCTCCCTGTACTATGAAATGTCTGAAAAATCT TTGAAAGATTACAAGGGTGAGAAGGATGGGAATGACTACTTGATTAATCTAATTGATTCT CCGGGCCATGTCGACTTTTCTTCGGATGTTACTGCAGCTTTGCGCATCACAGATGGTGCC TTGGTGGTGGTAGATTGTGTGGAGGGTGTCTGTGTGCAGACTGAAACTGTCCTTCGACAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O23755 |
Definition |
sp|O23755|EF2_BETVU Elongation factor 2 OS=Beta vulgaris |
Align length |
145 |
Score (bit) |
228.0 |
E-value |
1.0e-59 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q7XTK1 |
Definition |
tr|Q7XTK1|Q7XTK1_ORYSJ Os04g0118400 protein OS=Oryza sativa subsp. japonica |
Align length |
145 |
Score (bit) |
239.0 |
E-value |
5.0e-62 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK956843|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0026_M21, 5' (540 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q7XTK1|Q7XTK1_ORYSJ Os04g0118400 protein OS=Oryza sativa subs... 239 5e-62 tr|Q6H4L2|Q6H4L2_ORYSJ Os02g0519900 protein OS=Oryza sativa subs... 239 5e-62 tr|Q01MK8|Q01MK8_ORYSA H0613H07.5 protein OS=Oryza sativa GN=H06... 239 5e-62 tr|A2X5F3|A2X5F3_ORYSI Putative uncharacterized protein OS=Oryza... 239 5e-62 tr|A9SYQ5|A9SYQ5_PHYPA Predicted protein (Fragment) OS=Physcomit... 239 7e-62 tr|A9SYQ2|A9SYQ2_PHYPA Predicted protein OS=Physcomitrella paten... 239 7e-62 tr|B6U0S1|B6U0S1_MAIZE Elongation factor 2 OS=Zea mays PE=2 SV=1 239 9e-62 tr|Q5JKU5|Q5JKU5_ORYSJ cDNA clone:001-115-C05, full insert seque... 236 6e-61 tr|A2WUX6|A2WUX6_ORYSI Putative uncharacterized protein OS=Oryza... 236 8e-61 tr|A9U6Z5|A9U6Z5_PHYPA Predicted protein (Fragment) OS=Physcomit... 234 2e-60 tr|A9U245|A9U245_PHYPA Predicted protein OS=Physcomitrella paten... 234 2e-60 tr|Q9ASR1|Q9ASR1_ARATH At1g56070/T6H22_13 (Putative elongation f... 229 5e-59 tr|Q9SGT4|Q9SGT4_ARATH Elongation factor EF-2 OS=Arabidopsis tha... 228 2e-58 tr|A2ZXD6|A2ZXD6_ORYSJ Putative uncharacterized protein OS=Oryza... 227 3e-58 tr|Q8W0C4|Q8W0C4_ORYSJ cDNA clone:J033048F11, full insert sequen... 224 3e-57 tr|A9SYQ7|A9SYQ7_PHYPA Predicted protein OS=Physcomitrella paten... 224 3e-57 tr|A2WUL5|A2WUL5_ORYSI Putative uncharacterized protein OS=Oryza... 224 3e-57 tr|A8JHX9|A8JHX9_CHLRE Elongation factor 2 OS=Chlamydomonas rein... 217 3e-55 tr|A4SB22|A4SB22_OSTLU Predicted protein OS=Ostreococcus lucimar... 198 2e-49 tr|A9V921|A9V921_MONBE Predicted protein OS=Monosiga brevicollis... 194 3e-48 tr|A7PWR7|A7PWR7_VITVI Chromosome chr19 scaffold_35, whole genom... 193 4e-48 tr|Q52MA1|Q52MA1_XENLA Putative uncharacterized protein OS=Xenop... 192 7e-48 tr|Q8BMA8|Q8BMA8_MOUSE Putative uncharacterized protein OS=Mus m... 192 7e-48 tr|Q60423|Q60423_CRIGR Elongation factor 2 OS=Cricetulus griseus... 192 7e-48 tr|Q3UDC8|Q3UDC8_MOUSE Putative uncharacterized protein OS=Mus m... 192 7e-48 tr|Q3UBL9|Q3UBL9_MOUSE Putative uncharacterized protein OS=Mus m... 192 7e-48 tr|Q3TX47|Q3TX47_MOUSE Putative uncharacterized protein OS=Mus m... 192 7e-48 tr|Q3TW58|Q3TW58_MOUSE Putative uncharacterized protein OS=Mus m... 192 7e-48 tr|Q3TLB1|Q3TLB1_MOUSE Putative uncharacterized protein OS=Mus m... 192 7e-48 tr|Q3TK17|Q3TK17_MOUSE Putative uncharacterized protein OS=Mus m... 192 7e-48
>tr|Q7XTK1|Q7XTK1_ORYSJ Os04g0118400 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0020P07.3 PE=2 SV=2 Length = 843
Score = 239 bits (611), Expect = 5e-62 Identities = 124/145 (85%), Positives = 131/145 (90%) Frame = +1
Query: 106 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 285 MVKFT EELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVR+TDTR Sbjct: 1 MVKFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 60
Query: 286 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSDVTAALR 465 DEAERGITIKSTGISL+YEMS++SLK YKGE+DGN+YLINLIDSPGHVDFSS+VTAALR Sbjct: 61 ADEAERGITIKSTGISLFYEMSDESLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAALR 120
Query: 466 ITDGALXXXXXXXXXXXQTETVLRQ 540 ITDGAL QTETVLRQ Sbjct: 121 ITDGALVVVDCIEGVCVQTETVLRQ 145
>tr|Q6H4L2|Q6H4L2_ORYSJ Os02g0519900 protein OS=Oryza sativa subsp. japonica GN=P0461D06.32 PE=2 SV=1 Length = 843
Score = 239 bits (611), Expect = 5e-62 Identities = 124/145 (85%), Positives = 131/145 (90%) Frame = +1
Query: 106 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 285 MVKFT EELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVR+TDTR Sbjct: 1 MVKFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 60
Query: 286 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSDVTAALR 465 DEAERGITIKSTGISL+YEMS++SLK YKGE+DGN+YLINLIDSPGHVDFSS+VTAALR Sbjct: 61 ADEAERGITIKSTGISLFYEMSDESLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAALR 120
Query: 466 ITDGALXXXXXXXXXXXQTETVLRQ 540 ITDGAL QTETVLRQ Sbjct: 121 ITDGALVVVDCIEGVCVQTETVLRQ 145
>tr|Q01MK8|Q01MK8_ORYSA H0613H07.5 protein OS=Oryza sativa GN=H0613H07.5 PE=4 SV=1 Length = 843
Score = 239 bits (611), Expect = 5e-62 Identities = 124/145 (85%), Positives = 131/145 (90%) Frame = +1
Query: 106 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 285 MVKFT EELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVR+TDTR Sbjct: 1 MVKFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 60
Query: 286 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSDVTAALR 465 DEAERGITIKSTGISL+YEMS++SLK YKGE+DGN+YLINLIDSPGHVDFSS+VTAALR Sbjct: 61 ADEAERGITIKSTGISLFYEMSDESLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAALR 120
Query: 466 ITDGALXXXXXXXXXXXQTETVLRQ 540 ITDGAL QTETVLRQ Sbjct: 121 ITDGALVVVDCIEGVCVQTETVLRQ 145
>tr|A2X5F3|A2X5F3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_07431 PE=4 SV=1 Length = 843
Score = 239 bits (611), Expect = 5e-62 Identities = 124/145 (85%), Positives = 131/145 (90%) Frame = +1
Query: 106 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 285 MVKFT EELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVR+TDTR Sbjct: 1 MVKFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 60
Query: 286 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSDVTAALR 465 DEAERGITIKSTGISL+YEMS++SLK YKGE+DGN+YLINLIDSPGHVDFSS+VTAALR Sbjct: 61 ADEAERGITIKSTGISLFYEMSDESLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAALR 120
Query: 466 ITDGALXXXXXXXXXXXQTETVLRQ 540 ITDGAL QTETVLRQ Sbjct: 121 ITDGALVVVDCIEGVCVQTETVLRQ 145
>tr|A9SYQ5|A9SYQ5_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_217194 PE=4 SV=1 Length = 451
Score = 239 bits (610), Expect = 7e-62 Identities = 123/145 (84%), Positives = 131/145 (90%) Frame = +1
Query: 106 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 285 MVKF+ +ELR IMDKK+NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQE AGDVRLTDTR Sbjct: 1 MVKFSADELRAIMDKKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQETAGDVRLTDTR 60
Query: 286 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSDVTAALR 465 QDEA+RGITIKSTGISLYYEM+E+SLKDYKGEKDG+DYLINLIDSPGHVDFSS+VTAALR Sbjct: 61 QDEADRGITIKSTGISLYYEMTEESLKDYKGEKDGHDYLINLIDSPGHVDFSSEVTAALR 120
Query: 466 ITDGALXXXXXXXXXXXQTETVLRQ 540 ITDGAL QTETVLRQ Sbjct: 121 ITDGALVVVDCVEGVCVQTETVLRQ 145
>tr|A9SYQ2|A9SYQ2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_189887 PE=4 SV=1 Length = 843
Score = 239 bits (610), Expect = 7e-62 Identities = 123/145 (84%), Positives = 131/145 (90%) Frame = +1
Query: 106 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 285 MVKF+ +ELR IMDKK+NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQE AGDVRLTDTR Sbjct: 1 MVKFSADELRAIMDKKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQETAGDVRLTDTR 60
Query: 286 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSDVTAALR 465 QDEA+RGITIKSTGISLYYEM+E+SLKDYKGEKDG+DYLINLIDSPGHVDFSS+VTAALR Sbjct: 61 QDEADRGITIKSTGISLYYEMTEESLKDYKGEKDGHDYLINLIDSPGHVDFSSEVTAALR 120
Query: 466 ITDGALXXXXXXXXXXXQTETVLRQ 540 ITDGAL QTETVLRQ Sbjct: 121 ITDGALVVVDCVEGVCVQTETVLRQ 145
>tr|B6U0S1|B6U0S1_MAIZE Elongation factor 2 OS=Zea mays PE=2 SV=1 Length = 843
Score = 239 bits (609), Expect = 9e-62 Identities = 123/145 (84%), Positives = 130/145 (89%) Frame = +1
Query: 106 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 285 MVKFT EELR IMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVR+TDTR Sbjct: 1 MVKFTAEELRAIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 60
Query: 286 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSDVTAALR 465 DEAERGITIKSTGISLYYEM+++SLK+YKGE+DGN YLINLIDSPGHVDFSS+VTAALR Sbjct: 61 ADEAERGITIKSTGISLYYEMTDESLKNYKGERDGNQYLINLIDSPGHVDFSSEVTAALR 120
Query: 466 ITDGALXXXXXXXXXXXQTETVLRQ 540 ITDGAL QTETVLRQ Sbjct: 121 ITDGALVVVDCIEGVCVQTETVLRQ 145
>tr|Q5JKU5|Q5JKU5_ORYSJ cDNA clone:001-115-C05, full insert sequence OS=Oryza sativa subsp. japonica GN=P0439E07.16 PE=2 SV=1 Length = 826
Score = 236 bits (602), Expect = 6e-61 Identities = 119/145 (82%), Positives = 131/145 (90%) Frame = +1
Query: 106 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 285 MVKFT EE+RRIMDKK+NIRNMSV+AHVDHGKSTLTDSLVAAAGIIAQ+VAGDVR+TD+R Sbjct: 1 MVKFTVEEMRRIMDKKHNIRNMSVVAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDSR 60
Query: 286 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSDVTAALR 465 DEAERGITIKSTGISLYYEMS++SLK YKG++DGN+YLINLIDSPGHVDFSS+VTAALR Sbjct: 61 SDEAERGITIKSTGISLYYEMSDESLKSYKGDRDGNEYLINLIDSPGHVDFSSEVTAALR 120
Query: 466 ITDGALXXXXXXXXXXXQTETVLRQ 540 ITDGAL QTETVLRQ Sbjct: 121 ITDGALVVVDCIEGVCVQTETVLRQ 145
>tr|A2WUX6|A2WUX6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_03688 PE=4 SV=1 Length = 826
Score = 236 bits (601), Expect = 8e-61 Identities = 119/145 (82%), Positives = 131/145 (90%) Frame = +1
Query: 106 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 285 MVKFT EE+RRIMDKK+NIRNMSV+AHVDHGKSTLTDSLVAAAGIIAQ+VAGDVR+TD+R Sbjct: 1 MVKFTVEEMRRIMDKKHNIRNMSVVAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDSR 60
Query: 286 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSDVTAALR 465 DEAERGITIKSTGISLYYEMS++SLK YKG++DGN+YLINLIDSPGHVDFSS+VTAALR Sbjct: 61 ADEAERGITIKSTGISLYYEMSDESLKSYKGDRDGNEYLINLIDSPGHVDFSSEVTAALR 120
Query: 466 ITDGALXXXXXXXXXXXQTETVLRQ 540 ITDGAL QTETVLRQ Sbjct: 121 ITDGALVVVDCIEGVCVQTETVLRQ 145
>tr|A9U6Z5|A9U6Z5_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_228450 PE=4 SV=1 Length = 545
Score = 234 bits (598), Expect = 2e-60 Identities = 122/145 (84%), Positives = 128/145 (88%) Frame = +1
Query: 106 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 285 MVKF+ EELR IMDKK+NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQE AGDVRLTDTR Sbjct: 1 MVKFSAEELRAIMDKKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQETAGDVRLTDTR 60
Query: 286 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSDVTAALR 465 QDEA+RGITIKSTGISLYYEM+ +SLKDY GEKDG DYLINLIDSPGHVDFSS+VTAALR Sbjct: 61 QDEADRGITIKSTGISLYYEMTSESLKDYHGEKDGCDYLINLIDSPGHVDFSSEVTAALR 120
Query: 466 ITDGALXXXXXXXXXXXQTETVLRQ 540 ITDGAL QTETVLRQ Sbjct: 121 ITDGALVVVDCVEGVCVQTETVLRQ 145
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