DK956845 |
Clone id |
TST39A01NGRL0026_M23 |
Library |
TST39 |
Length |
623 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0026_M23. 5' end sequence. |
Accession |
DK956845 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL57Contig1 |
Sequence |
GCTTCCGCAGCCATCTCCTCCTCCTCTTTTGCCGATGTCTCGGCTAAATTATGTTTCTCC TCTTCTTCCTCCGTTTCTGGCTCTCGCCTTTGCGCACCTGTCTCTCTAACGGTTCCTTCC TCCCGCGCCCGCTCGTCGTCCGTGTCTGCTGCACTGTATTCTGATTCCTCATATGACCTT TCCTCCTTCAAGTTTGAGCCCATTCGGGAATCCATTGTTGCCCGTGAGATGACCCGCCGC TACATGACAGACATGATCACCCATGCAGACACTGATGTTGTGGTTGTGGGTGCTGGTTCT GCTGGCCTGTCATGTGCGTATGAGCTCAGCAAGAACCCCAACGTCAAGGTTGCCATTGTG GAGCAGTCTGTAAGCCCAGGTGGTGGAGCTTGGCTCGGTGGGCAGCTCTTCTCTGCCATG ATTGTAAGGAAGCCAGCCCACCTCTTCCTTGATGAGATTGGTGTGCCCTACGATGAGAAG GATACCTATGTTGTTATCAAGCATGCTGCGCTCTTCACATCCACCATCATGAGCAAGCTT CTGGCCAGGCCAAATGTGAAGCTCTTTAATGCGGTTGCTGCAGAGGATCTGATAATTAAG GAGAATCGTGTAGCGGGTGTGGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O23787 |
Definition |
sp|O23787|THI4_CITSI Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis |
Align length |
145 |
Score (bit) |
253.0 |
E-value |
6.0e-67 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK956845|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0026_M23, 5' (623 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|O23787|THI4_CITSI Thiazole biosynthetic enzyme, chloroplastic... 253 6e-67 sp|Q38814|THI4_ARATH Thiazole biosynthetic enzyme, chloroplastic... 252 1e-66 sp|Q41739|THI42_MAIZE Thiazole biosynthetic enzyme 1-2, chloropl... 243 6e-64 sp|Q41738|THI41_MAIZE Thiazole biosynthetic enzyme 1-1, chloropl... 239 8e-63 sp|Q38709|THI4_ALNGL Thiazole biosynthetic enzyme, chloroplastic... 237 4e-62 sp|P40998|THI2_SCHPO Thiazole biosynthetic enzyme, mitochondrial... 193 7e-49 sp|P23618|THI4_FUSOX Thiazole biosynthetic enzyme, mitochondrial... 187 3e-47 sp|Q9UUZ9|THI4_ASPOR Thiazole biosynthetic enzyme, mitochondrial... 182 1e-45 sp|P23617|THI4_FUSSH Thiazole biosynthetic enzyme, mitochondrial... 182 2e-45 sp|P32318|THI4_YEAST Thiazole biosynthetic enzyme, mitochondrial... 177 3e-44 sp|Q9UVF8|THI4_UROFA Thiazole biosynthetic enzyme, mitochondrial... 174 4e-43 sp|O59082|THI4_PYRHO Putative thiazole biosynthetic enzyme OS=Py... 100 6e-21 sp|Q9V0J8|THI4_PYRAB Putative thiazole biosynthetic enzyme OS=Py... 97 5e-20 sp|Q8U0Q5|THI4_PYRFU Putative thiazole biosynthetic enzyme OS=Py... 94 6e-19 sp|Q5JD25|THI4_PYRKO Putative thiazole biosynthetic enzyme OS=Py... 90 1e-17 sp|Q9WZP4|THI4_THEMA Putative thiazole biosynthetic enzyme OS=Th... 88 3e-17 sp|O27657|THI4_METTH Putative thiazole biosynthetic enzyme OS=Me... 80 1e-14 sp|Q9Y9Z0|THI4_AERPE Putative thiazole biosynthetic enzyme OS=Ae... 76 1e-13 sp|Q8TM19|THI4_METAC Putative thiazole biosynthetic enzyme OS=Me... 75 2e-13 sp|Q8Q0B5|THI4_METMA Putative thiazole biosynthetic enzyme OS=Me... 74 6e-13 sp|Q9HMC7|THI4_HALSA Putative thiazole biosynthetic enzyme OS=Ha... 74 6e-13 sp|Q18KP1|THI4_HALWD Putative thiazole biosynthetic enzyme OS=Ha... 74 8e-13 sp|Q46AR1|THI4_METBF Putative thiazole biosynthetic enzyme OS=Me... 72 2e-12 sp|Q97ZY5|THI4_SULSO Putative thiazole biosynthetic enzyme OS=Su... 72 3e-12 sp|Q4JAF8|THI4_SULAC Putative thiazole biosynthetic enzyme OS=Su... 72 3e-12 sp|Q6LXJ8|THI4_METMP Putative thiazole biosynthetic enzyme OS=Me... 72 3e-12 sp|A3CXS4|THI4_METMJ Putative thiazole biosynthetic enzyme OS=Me... 70 1e-11 sp|Q58018|THI4_METJA Putative thiazole biosynthetic enzyme OS=Me... 67 7e-11 sp|O29556|THI4_ARCFU Putative thiazole biosynthetic enzyme OS=Ar... 67 1e-10 sp|Q12U93|THI4_METBU Putative thiazole biosynthetic enzyme OS=Me... 66 2e-10
>sp|O23787|THI4_CITSI Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis GN=THI1 PE=2 SV=1 Length = 356
Score = 253 bits (646), Expect = 6e-67 Identities = 122/145 (84%), Positives = 136/145 (93%) Frame = +1
Query: 187 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKNPNVKVAIVEQ 366 FKF+PI+ESIV+REMTRRYMTDMIT+ADTD GAGSAGLSCAYELSKNPN+++AI+EQ Sbjct: 63 FKFDPIKESIVSREMTRRYMTDMITYADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQ 122
Query: 367 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLLA 546 SVSPGGGAWLGGQLFSAM+VRKPAH+FLDE+G+ YDE+D YVVIKHAALFTSTIMSKLLA Sbjct: 123 SVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLA 182
Query: 547 RPNVKLFNAVAAEDLIIKENRVAGV 621 RPNVKLFNAVAAEDLI+K RV GV Sbjct: 183 RPNVKLFNAVAAEDLIVKGGRVGGV 207
>sp|Q38814|THI4_ARATH Thiazole biosynthetic enzyme, chloroplastic OS=Arabidopsis thaliana GN=THI1 PE=1 SV=1 Length = 349
Score = 252 bits (643), Expect = 1e-66 Identities = 125/145 (86%), Positives = 136/145 (93%) Frame = +1
Query: 187 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKNPNVKVAIVEQ 366 F F+PI+ESIV+REMTRRYMTDMIT+A+TD GAGSAGLS AYE+SKNPNV+VAI+EQ Sbjct: 56 FTFDPIKESIVSREMTRRYMTDMITYAETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQ 115
Query: 367 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLLA 546 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGV YDE+DTYVV+KHAALFTSTIMSKLLA Sbjct: 116 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAALFTSTIMSKLLA 175
Query: 547 RPNVKLFNAVAAEDLIIKENRVAGV 621 RPNVKLFNAVAAEDLI+K NRV GV Sbjct: 176 RPNVKLFNAVAAEDLIVKGNRVGGV 200
>sp|Q41739|THI42_MAIZE Thiazole biosynthetic enzyme 1-2, chloroplastic OS=Zea mays GN=THI1-2 PE=2 SV=1 Length = 354
Score = 243 bits (620), Expect = 6e-64 Identities = 118/145 (81%), Positives = 131/145 (90%) Frame = +1
Query: 187 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKNPNVKVAIVEQ 366 F+F PI+ESIV+REMTRRYMTDMITHADTD GAGSAGLSCAYELSK+P V VAIVEQ Sbjct: 59 FRFSPIKESIVSREMTRRYMTDMITHADTDVVIVGAGSAGLSCAYELSKDPTVSVAIVEQ 118
Query: 367 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLLA 546 SVSPGGGAWLGGQLFSAM+VR+PAHLFLDE+GV YDE + YVV+KHAALFTST+MS+LLA Sbjct: 119 SVSPGGGAWLGGQLFSAMVVRRPAHLFLDELGVGYDEAEDYVVVKHAALFTSTVMSRLLA 178
Query: 547 RPNVKLFNAVAAEDLIIKENRVAGV 621 RPNVKLFNAVA EDLI++ RV GV Sbjct: 179 RPNVKLFNAVAVEDLIVRRGRVGGV 203
>sp|Q41738|THI41_MAIZE Thiazole biosynthetic enzyme 1-1, chloroplastic OS=Zea mays GN=THI1-1 PE=2 SV=1 Length = 354
Score = 239 bits (610), Expect = 8e-63 Identities = 118/145 (81%), Positives = 130/145 (89%) Frame = +1
Query: 187 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKNPNVKVAIVEQ 366 F+F PI+ESIV+REMTRRYMTDMIT+ADTD GAGSAGLSCAYELSK+P V +AIVEQ Sbjct: 62 FRFSPIKESIVSREMTRRYMTDMITYADTDVVIVGAGSAGLSCAYELSKDPAVSIAIVEQ 121
Query: 367 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLLA 546 SVSPGGGAWLGGQLFSAM+VRKPAHLFLDE+GV YDE + YVVIKHAALFTST+MS LLA Sbjct: 122 SVSPGGGAWLGGQLFSAMVVRKPAHLFLDELGVAYDEAEDYVVIKHAALFTSTVMSLLLA 181
Query: 547 RPNVKLFNAVAAEDLIIKENRVAGV 621 RPNVKLFNAVA EDLI++ RV GV Sbjct: 182 RPNVKLFNAVAVEDLIVRGGRVGGV 206
>sp|Q38709|THI4_ALNGL Thiazole biosynthetic enzyme, chloroplastic OS=Alnus glutinosa GN=THI4 PE=2 SV=1 Length = 352
Score = 237 bits (604), Expect = 4e-62 Identities = 118/145 (81%), Positives = 131/145 (90%) Frame = +1
Query: 187 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKNPNVKVAIVEQ 366 F F+PI+ESIV+REMTRRYM DMIT+ADTD GAGS+GL C YELSKNP+V+VAI+EQ Sbjct: 60 FTFDPIKESIVSREMTRRYMMDMITYADTDVVVVGAGSSGLVC-YELSKNPSVQVAIIEQ 118
Query: 367 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLLA 546 SVSPGGGAWLGGQLFS M+VRKPAHLFLDE+G+ YDE+D YVVIKHAALFTSTIMSKLLA Sbjct: 119 SVSPGGGAWLGGQLFSGMVVRKPAHLFLDELGIEYDEQDNYVVIKHAALFTSTIMSKLLA 178
Query: 547 RPNVKLFNAVAAEDLIIKENRVAGV 621 RPNVKLFNAVAAEDLI+K RV GV Sbjct: 179 RPNVKLFNAVAAEDLIVKGGRVGGV 203
>sp|P40998|THI2_SCHPO Thiazole biosynthetic enzyme, mitochondrial OS=Schizosaccharomyces pombe GN=thi2 PE=2 SV=2 Length = 328
Score = 193 bits (490), Expect = 7e-49 Identities = 96/151 (63%), Positives = 122/151 (80%), Gaps = 6/151 (3%) Frame = +1
Query: 187 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYEL-SKNPNVKVAIVE 363 F F PIRES V+R MTRRY +D+ +A++D GAGSAGL+ AY + ++ P++K+AI+E Sbjct: 49 FSFAPIRESTVSRAMTRRYFSDLDKYAESDIVIVGAGSAGLTAAYYIGTRRPDLKIAIIE 108
Query: 364 QSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLL 543 SV+PGGGAWLGGQLFSAM+VRKPA LFL+EIGVPY+++ YVV+KHAALFTST+M++ L Sbjct: 109 ASVAPGGGAWLGGQLFSAMVVRKPADLFLNEIGVPYEDEGDYVVVKHAALFTSTVMARTL 168
Query: 544 ARPNVKLFNAVAAEDLIIKE-----NRVAGV 621 A PNVKLFNA A EDLI+KE R+AGV Sbjct: 169 ALPNVKLFNATAVEDLIVKEGKDGKQRIAGV 199
>sp|P23618|THI4_FUSOX Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium oxysporum GN=STI35 PE=2 SV=2 Length = 320
Score = 187 bits (476), Expect = 3e-47 Identities = 96/150 (64%), Positives = 116/150 (77%), Gaps = 5/150 (3%) Frame = +1
Query: 187 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKN-PNVKVAIVE 363 FKF PIRES V+R MTRRY D+ +A++D GAGS GLS AY L K P++K+AI+E Sbjct: 44 FKFAPIRESQVSRAMTRRYFQDLDNYAESDIVIIGAGSCGLSAAYILGKKRPDLKIAIIE 103
Query: 364 QSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLL 543 SVSPGGGAWLGGQLFSAMI+RKPA FL E+GVPY+++ YVV+KHAALFTSTIMSK+L Sbjct: 104 ASVSPGGGAWLGGQLFSAMIMRKPADAFLREVGVPYEDEGNYVVVKHAALFTSTIMSKVL 163
Query: 544 ARPNVKLFNAVAAEDLIIKEN----RVAGV 621 PN+KLFNA EDLI + + R+AGV Sbjct: 164 QMPNIKLFNATCVEDLITRPSEEGVRIAGV 193
>sp|Q9UUZ9|THI4_ASPOR Thiazole biosynthetic enzyme, mitochondrial OS=Aspergillus oryzae GN=thiA PE=3 SV=2 Length = 327
Score = 182 bits (462), Expect = 1e-45 Identities = 97/153 (63%), Positives = 121/153 (79%), Gaps = 8/153 (5%) Frame = +1
Query: 187 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSK-NPNVKVAIVE 363 FKF PIRES V+R MTRRY D+ +A++D GAGS GLS AY L+K P++K+AIVE Sbjct: 48 FKFAPIRESQVSRAMTRRYFEDLDKYAESDVVIVGAGSCGLSTAYVLAKARPDLKIAIVE 107
Query: 364 QSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDE--KDTYVVIKHAALFTSTIMSK 537 SVSPGGGAWLGGQLFSAM++R+PA +FL+E+GVPY+E YVV+KHA+LFTST+MSK Sbjct: 108 ASVSPGGGAWLGGQLFSAMVMRRPAEVFLNELGVPYEEDANPNYVVVKHASLFTSTLMSK 167
Query: 538 LLARPNVKLFNAVAAEDLIIK--EN---RVAGV 621 +L+ PNVKLFNA A EDLI + EN ++AGV Sbjct: 168 VLSFPNVKLFNATAVEDLITRPTENGNPQIAGV 200
>sp|P23617|THI4_FUSSH Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium solani subsp. phaseoli GN=STI35 PE=2 SV=1 Length = 324
Score = 182 bits (461), Expect = 2e-45 Identities = 93/150 (62%), Positives = 114/150 (76%), Gaps = 5/150 (3%) Frame = +1
Query: 187 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKN-PNVKVAIVE 363 FKF PIRES V+R MTRRY D+ +A++D GAGS GLS Y L K P++K+AI+E Sbjct: 48 FKFAPIRESQVSRAMTRRYFQDLDNYAESDIVIVGAGSCGLSTRYILGKKRPDLKIAIIE 107
Query: 364 QSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLL 543 SVSPGGGAWLGGQLFSAM++RKPA FL E+GVPY+++ YVV+KHAALFTSTIMSK+L Sbjct: 108 ASVSPGGGAWLGGQLFSAMVMRKPADAFLREVGVPYEDEGNYVVVKHAALFTSTIMSKVL 167
Query: 544 ARPNVKLFNAVAAEDLIIKEN----RVAGV 621 PN KLFNA EDLI + + R++GV Sbjct: 168 QLPNCKLFNATCVEDLITRPSKEGVRISGV 197
>sp|P32318|THI4_YEAST Thiazole biosynthetic enzyme, mitochondrial OS=Saccharomyces cerevisiae GN=THI4 PE=1 SV=1 Length = 326
Score = 177 bits (450), Expect = 3e-44 Identities = 90/152 (59%), Positives = 114/152 (75%), Gaps = 7/152 (4%) Frame = +1
Query: 187 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKN-PNVKVAIVE 363 FKF PIRES V+R MT RY D+ A +D GAGS+GLS AY ++KN P++KV I+E Sbjct: 38 FKFAPIRESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIE 97
Query: 364 QSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLL 543 SV+PGGG+WLGGQLFSAM++RKPAHLFL E+ +PY+++ YVV+KHAALF ST++SK+L Sbjct: 98 SSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHAALFISTVLSKVL 157
Query: 544 ARPNVKLFNAVAAEDLIIK------ENRVAGV 621 PNVKLFNA EDL+ + E VAGV Sbjct: 158 QLPNVKLFNATCVEDLVTRPPTEKGEVTVAGV 189
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NRW5 |
Definition |
tr|A9NRW5|A9NRW5_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
145 |
Score (bit) |
261.0 |
E-value |
2.0e-68 |
Report |
|