DK956853 |
Clone id |
TST39A01NGRL0026_N07 |
Library |
TST39 |
Length |
669 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0026_N07. 5' end sequence. |
Accession |
DK956853 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL3497Contig1 |
Sequence |
CTCTCACACACACACACACACACACACACACACACACACACACACTAGATCAGCGTAGCT CATGCAGAGAGCTCCGATTCTGTGTTTGTAGATTTGGGTTCCCGAATTCCTCTGCTATAT TGCCATGTCGAATTTCATCAACTTTGCGCAGGTTTCCGAGCACAGCACATCAGAGAAATG CTGGATCCTCATCAGTGGCAAGGTCTATGATGTTACGCGGTTCTTAGAGGAGCATCCTGG AGGGGATGATGTTATATTGTCAGCAACAGGTAAGGATGCTACTGACGACTTTGAGGATGT GGGGCATTCGGAAACGGCGCGAGGCATGTTGAAGGATTACTACATTGGGGATATTGATGC TTCAACAATTCCCAAGACTACCGCCTACAAGGCCCCCAAGCAACCCAAATACAATCAAGA CAAGAGTGCGCAATTCGTTGGCAAAATTTTGCAGCTTGTTCTTCCACTTGCTATATTTGC CGGGGCCGTCGCGATGCATTTTTATTCAAAATCAAATGCCTAGTGAATGCCACATGTTTT CACACGCTGTCCTCGTATCTGTTATCCCACTGGAATGACTCTTTTGTGCTAAATAACCAA TTTTTGATTTTCATGACTTATTCCATCAATGGGTTCGAAAAGTTCTGTATTTCAAAAAAA AAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O04354 |
Definition |
sp|O04354|CYB5_BOROF Cytochrome b5 OS=Borago officinalis |
Align length |
132 |
Score (bit) |
182.0 |
E-value |
1.0e-45 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
O24651 |
Definition |
tr|O24651|O24651_OLEEU Cytochrome b5 (Fragment) OS=Olea europaea |
Align length |
132 |
Score (bit) |
183.0 |
E-value |
9.0e-45 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK956853|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0026_N07, 5' (653 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|O24651|O24651_OLEEU Cytochrome b5 (Fragment) OS=Olea europaea... 183 9e-45 tr|Q94DH6|Q94DH6_ORYSJ cDNA clone:J023022G15, full insert sequen... 176 1e-42 tr|A5ATD8|A5ATD8_VITVI Putative uncharacterized protein (Chromos... 176 1e-42 tr|A2WZK1|A2WZK1_ORYSI Putative uncharacterized protein OS=Oryza... 176 1e-42 tr|B6T7Z2|B6T7Z2_MAIZE Cytochrome b5 OS=Zea mays PE=2 SV=1 175 2e-42 tr|Q5V9L2|Q5V9L2_VERFO Cytochrome b5 isoform Cb5-C OS=Vernicia f... 174 3e-42 tr|Q0WTX9|Q0WTX9_ARATH Putative cytochrome b5 OS=Arabidopsis tha... 174 3e-42 tr|Q0DLC5|Q0DLC5_ORYSJ Os05g0108800 protein OS=Oryza sativa subs... 174 4e-42 tr|A2XZJ1|A2XZJ1_ORYSI Putative uncharacterized protein OS=Oryza... 174 4e-42 tr|A9PB66|A9PB66_POPTR Putative uncharacterized protein OS=Popul... 173 7e-42 tr|A9PDU1|A9PDU1_POPTR Putative uncharacterized protein OS=Popul... 172 2e-41 tr|Q5V9L3|Q5V9L3_VERFO Cytochrome b5 isoform Cb5-B OS=Vernicia f... 171 4e-41 tr|A8CI86|A8CI86_CREAL Cytochrome b5 type 06 OS=Crepis alpina PE... 170 6e-41 tr|B6TTI9|B6TTI9_MAIZE Cytochrome b5 OS=Zea mays PE=2 SV=1 170 8e-41 tr|B4FPK8|B4FPK8_MAIZE Cytochrome b5 OS=Zea mays PE=2 SV=1 170 8e-41 tr|B4FKH7|B4FKH7_MAIZE Cytochrome b5 OS=Zea mays PE=2 SV=1 170 8e-41 tr|A9PCQ4|A9PCQ4_POPTR Putative uncharacterized protein OS=Popul... 169 1e-40 tr|A9NST8|A9NST8_PICSI Putative uncharacterized protein OS=Picea... 167 4e-40 tr|A9NS90|A9NS90_PICSI Putative uncharacterized protein OS=Picea... 167 5e-40 tr|A9SE60|A9SE60_PHYPA Predicted protein OS=Physcomitrella paten... 160 8e-38 tr|A9SUJ1|A9SUJ1_PHYPA Predicted protein OS=Physcomitrella paten... 158 3e-37 tr|A8CI97|A8CI97_CREAL Cytochrome b5 type 11 OS=Crepis alpina PE... 158 3e-37 tr|Q8H293|Q8H293_ANACO Cytochrome b5 OS=Ananas comosus PE=2 SV=1 154 6e-36 tr|Q9ZWT2|Q9ZWT2_ARATH Cytochrome b5 (Dbj|BAA74840.1) OS=Arabido... 153 8e-36 tr|A5Z1Y7|A5Z1Y7_MALDO Cytochrome b5 OS=Malus domestica GN=CYB5 ... 152 1e-35 tr|O48618|O48618_OLEEU Cytochome b5 (Fragment) OS=Olea europaea ... 151 4e-35 tr|B3TLQ4|B3TLQ4_ELAGV Cytochrome b5 OS=Elaeis guineensis var. t... 150 5e-35 tr|Q5V9L4|Q5V9L4_VERFO Cytochrome b5 isoform Cb5-A OS=Vernicia f... 150 9e-35 tr|A7QEY3|A7QEY3_VITVI Chromosome chr16 scaffold_86, whole genom... 148 3e-34 tr|B6TKX4|B6TKX4_MAIZE Cytochrome b5 OS=Zea mays PE=2 SV=1 143 1e-32
>tr|O24651|O24651_OLEEU Cytochrome b5 (Fragment) OS=Olea europaea GN=cytb5-1 PE=2 SV=1 Length = 132
Score = 183 bits (464), Expect = 9e-45 Identities = 80/132 (60%), Positives = 105/132 (79%) Frame = +2
Query: 125 MSNFINFAQVSEHSTSEKCWILISGKVYDVTRFLEEHPGGDDVILSATGKDATDDFEDVG 304 MS A+VSEH+ ++ CW++I GKVYDVT+FLE+HPGGD+V+LSATGKDATDDFEDVG Sbjct: 1 MSKVFTLAEVSEHNNAKDCWLIIDGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVG 60
Query: 305 HSETARGMLKDYYIGDIDASTIPKTTAYKAPKQPKYNQDKSAQFVGKILQLVLPLAIFAG 484 HS TA+ M+ ++Y+GD D ST+P T Y PKQP YNQDK++ F+ K+LQ ++PL I Sbjct: 61 HSSTAKAMMDEFYVGDFDTSTVPTKTQYTPPKQPHYNQDKTSDFIIKLLQFLVPLFILGV 120
Query: 485 AVAMHFYSKSNA 520 AV +HFY+KS+A Sbjct: 121 AVGIHFYTKSSA 132
>tr|Q94DH6|Q94DH6_ORYSJ cDNA clone:J023022G15, full insert sequence OS=Oryza sativa subsp. japonica GN=P0518C01.12 PE=2 SV=1 Length = 135
Score = 176 bits (445), Expect = 1e-42 Identities = 81/134 (60%), Positives = 105/134 (78%), Gaps = 2/134 (1%) Frame = +2
Query: 125 MSN--FINFAQVSEHSTSEKCWILISGKVYDVTRFLEEHPGGDDVILSATGKDATDDFED 298 MSN + +VS+H+T + CW++I GKVY+VT+FLE+HPGGDDV+LS+T KDATDDFED Sbjct: 1 MSNNKVLTLEEVSKHNTKDDCWLIIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFED 60
Query: 299 VGHSETARGMLKDYYIGDIDASTIPKTTAYKAPKQPKYNQDKSAQFVGKILQLVLPLAIF 478 VGHS TAR M+ +YY+GDIDA+TIP Y PKQP YNQDK+ +F+ KILQ ++PLAI Sbjct: 61 VGHSTTARAMMDEYYVGDIDATTIPTKVKYTPPKQPHYNQDKTPEFIIKILQFLVPLAIL 120
Query: 479 AGAVAMHFYSKSNA 520 AVA+ Y+KS + Sbjct: 121 GLAVAVRIYTKSES 134
>tr|A5ATD8|A5ATD8_VITVI Putative uncharacterized protein (Chromosome undetermined scaffold_70, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00033838001 PE=3 SV=1 Length = 133
Score = 176 bits (445), Expect = 1e-42 Identities = 78/123 (63%), Positives = 101/123 (82%) Frame = +2
Query: 146 AQVSEHSTSEKCWILISGKVYDVTRFLEEHPGGDDVILSATGKDATDDFEDVGHSETARG 325 A+VSEH+T + CW++I GKVYDVT+FLE+HPGGDDV+LSATGKDATDDFEDVGHS +AR Sbjct: 10 AEVSEHNTPKDCWLIIDGKVYDVTKFLEDHPGGDDVLLSATGKDATDDFEDVGHSSSARA 69
Query: 326 MLKDYYIGDIDASTIPKTTAYKAPKQPKYNQDKSAQFVGKILQLVLPLAIFAGAVAMHFY 505 M+ ++++GDID +TIP Y PKQP YNQDK+++FV K+LQ ++PL I AV + FY Sbjct: 70 MMDEFHVGDIDTATIPSKVNYTPPKQPHYNQDKTSEFVIKLLQFLVPLIILGVAVGIRFY 129
Query: 506 SKS 514 +KS Sbjct: 130 TKS 132
>tr|A2WZK1|A2WZK1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_05385 PE=2 SV=1 Length = 135
Score = 176 bits (445), Expect = 1e-42 Identities = 81/134 (60%), Positives = 105/134 (78%), Gaps = 2/134 (1%) Frame = +2
Query: 125 MSN--FINFAQVSEHSTSEKCWILISGKVYDVTRFLEEHPGGDDVILSATGKDATDDFED 298 MSN + +VS+H+T + CW++I GKVY+VT+FLE+HPGGDDV+LS+T KDATDDFED Sbjct: 1 MSNNKVLTLEEVSKHNTKDDCWLIIGGKVYNVTKFLEDHPGGDDVLLSSTAKDATDDFED 60
Query: 299 VGHSETARGMLKDYYIGDIDASTIPKTTAYKAPKQPKYNQDKSAQFVGKILQLVLPLAIF 478 VGHS TAR M+ +YY+GDIDA+TIP Y PKQP YNQDK+ +F+ KILQ ++PLAI Sbjct: 61 VGHSTTARAMMDEYYVGDIDATTIPTKVKYTPPKQPHYNQDKTPEFIIKILQFLVPLAIL 120
Query: 479 AGAVAMHFYSKSNA 520 AVA+ Y+KS + Sbjct: 121 GLAVAVRIYTKSES 134
>tr|B6T7Z2|B6T7Z2_MAIZE Cytochrome b5 OS=Zea mays PE=2 SV=1 Length = 133
Score = 175 bits (444), Expect = 2e-42 Identities = 81/132 (61%), Positives = 102/132 (77%) Frame = +2
Query: 125 MSNFINFAQVSEHSTSEKCWILISGKVYDVTRFLEEHPGGDDVILSATGKDATDDFEDVG 304 MS V++H++ E CW++I GKVYDVT+FL +HPGGDDV+LS+TGKDATDDFEDVG Sbjct: 1 MSKVFTLDAVAKHNSKEDCWLIIGGKVYDVTKFLVDHPGGDDVLLSSTGKDATDDFEDVG 60
Query: 305 HSETARGMLKDYYIGDIDASTIPKTTAYKAPKQPKYNQDKSAQFVGKILQLVLPLAIFAG 484 HS TAR M+ +Y +G+IDASTIP T Y PKQP YNQDK+ +FV KILQ ++PLAI Sbjct: 61 HSNTARAMMDEYLVGEIDASTIPSRTKYVPPKQPHYNQDKTPEFVIKILQFLVPLAILGL 120
Query: 485 AVAMHFYSKSNA 520 AVA+ Y+KS + Sbjct: 121 AVAVRMYTKSES 132
>tr|Q5V9L2|Q5V9L2_VERFO Cytochrome b5 isoform Cb5-C OS=Vernicia fordii PE=2 SV=1 Length = 136
Score = 174 bits (442), Expect = 3e-42 Identities = 78/123 (63%), Positives = 100/123 (81%) Frame = +2
Query: 146 AQVSEHSTSEKCWILISGKVYDVTRFLEEHPGGDDVILSATGKDATDDFEDVGHSETARG 325 A+VSEH+ + CW++I GKVYDVT+FLE+HPGGD+V+LSATGKDATDDFEDVGHS +AR Sbjct: 11 AEVSEHNNPKDCWLVIEGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSSSARA 70
Query: 326 MLKDYYIGDIDASTIPKTTAYKAPKQPKYNQDKSAQFVGKILQLVLPLAIFAGAVAMHFY 505 M+ ++Y+G+ID+STIP AY PKQP YNQDK+ +F+ K LQ V+PL I AV + FY Sbjct: 71 MMDEFYVGEIDSSTIPSRMAYTPPKQPHYNQDKTMEFIIKFLQFVVPLLILGLAVGIRFY 130
Query: 506 SKS 514 +KS Sbjct: 131 TKS 133
>tr|Q0WTX9|Q0WTX9_ARATH Putative cytochrome b5 OS=Arabidopsis thaliana GN=At2g32720 PE=2 SV=1 Length = 134
Score = 174 bits (442), Expect = 3e-42 Identities = 77/129 (59%), Positives = 104/129 (80%) Frame = +2
Query: 128 SNFINFAQVSEHSTSEKCWILISGKVYDVTRFLEEHPGGDDVILSATGKDATDDFEDVGH 307 + ++VSEH+ + CWI+I+GKVY+VT+FLE+HPGGDDV+LS+TGKDATDDFEDVGH Sbjct: 5 AKIFTLSEVSEHNQAHDCWIVINGKVYNVTKFLEDHPGGDDVLLSSTGKDATDDFEDVGH 64
Query: 308 SETARGMLKDYYIGDIDASTIPKTTAYKAPKQPKYNQDKSAQFVGKILQLVLPLAIFAGA 487 SE+AR M++ YY+G+ID +TIPK Y PKQP YNQDK+++F+ K+LQ ++PLAI A Sbjct: 65 SESAREMMEQYYVGEIDPTTIPKKVKYTPPKQPHYNQDKTSEFIIKLLQFLVPLAILGLA 124
Query: 488 VAMHFYSKS 514 V + Y+KS Sbjct: 125 VGIRIYTKS 133
>tr|Q0DLC5|Q0DLC5_ORYSJ Os05g0108800 protein OS=Oryza sativa subsp. japonica GN=Os05g0108800 PE=2 SV=1 Length = 137
Score = 174 bits (441), Expect = 4e-42 Identities = 77/124 (62%), Positives = 102/124 (82%) Frame = +2
Query: 149 QVSEHSTSEKCWILISGKVYDVTRFLEEHPGGDDVILSATGKDATDDFEDVGHSETARGM 328 +V++H++ + CW++I GKVY+V++FLE+HPGGDDV+LS+TGKDATDDFEDVGHS TAR M Sbjct: 13 EVAKHNSKDDCWLIIGGKVYNVSKFLEDHPGGDDVLLSSTGKDATDDFEDVGHSTTARAM 72
Query: 329 LKDYYIGDIDASTIPKTTAYKAPKQPKYNQDKSAQFVGKILQLVLPLAIFAGAVAMHFYS 508 + +YY+GDID STIP T Y PKQP YNQDK+ +F+ KILQ ++PLAI AVA+ Y+ Sbjct: 73 MDEYYVGDIDTSTIPARTKYVPPKQPHYNQDKTPEFIIKILQFLVPLAILGLAVAIRIYT 132
Query: 509 KSNA 520 KS + Sbjct: 133 KSES 136
>tr|A2XZJ1|A2XZJ1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_18149 PE=3 SV=1 Length = 137
Score = 174 bits (441), Expect = 4e-42 Identities = 77/124 (62%), Positives = 102/124 (82%) Frame = +2
Query: 149 QVSEHSTSEKCWILISGKVYDVTRFLEEHPGGDDVILSATGKDATDDFEDVGHSETARGM 328 +V++H++ + CW++I GKVY+V++FLE+HPGGDDV+LS+TGKDATDDFEDVGHS TAR M Sbjct: 13 EVAKHNSKDDCWLIIGGKVYNVSKFLEDHPGGDDVLLSSTGKDATDDFEDVGHSTTARAM 72
Query: 329 LKDYYIGDIDASTIPKTTAYKAPKQPKYNQDKSAQFVGKILQLVLPLAIFAGAVAMHFYS 508 + +YY+GDID STIP T Y PKQP YNQDK+ +F+ KILQ ++PLAI AVA+ Y+ Sbjct: 73 MDEYYVGDIDTSTIPARTKYVPPKQPHYNQDKTPEFIIKILQFLVPLAILGLAVAIRIYT 132
Query: 509 KSNA 520 KS + Sbjct: 133 KSES 136
>tr|A9PB66|A9PB66_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 136
Score = 173 bits (439), Expect = 7e-42 Identities = 75/123 (60%), Positives = 101/123 (82%) Frame = +2
Query: 146 AQVSEHSTSEKCWILISGKVYDVTRFLEEHPGGDDVILSATGKDATDDFEDVGHSETARG 325 A+VS H++ + CW+++ G+VYDVT+FLE+HPGGDDV+LSATGKDATDDFEDVGHS TAR Sbjct: 11 AEVSAHNSPKDCWLVVEGRVYDVTKFLEDHPGGDDVLLSATGKDATDDFEDVGHSSTARA 70
Query: 326 MLKDYYIGDIDASTIPKTTAYKAPKQPKYNQDKSAQFVGKILQLVLPLAIFAGAVAMHFY 505 ++ ++Y+GDID +TIP + Y PKQP YNQDK+ +F+ K+LQ ++PL I A AV + FY Sbjct: 71 LMDEFYVGDIDTATIPTSVKYTPPKQPHYNQDKTPEFIIKLLQFLVPLIILAVAVGVRFY 130
Query: 506 SKS 514 +KS Sbjct: 131 TKS 133
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