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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK956859
Clone id TST39A01NGRL0026_N13
Library
Length 218
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0026_N13. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CGCGCTAAAAATCTTTCTCTTTCTCTCTCTCTCTCTCTCTCTGTCATACTCACACACTCA
TGCCCCAATCCCCTGAAAACGGCAGCTGCCTCTTCTTCCGTCGCTACCACACAGCAATAC
ACCCCCCTCTCGATCCGAGCTGGGTCGTACGCAAATGAACTCGTGAATACTGCAAAATCT
ATTGCCTCTAAGGGCCGAGGAATCTTGGCCATGGTATG
■■Homology search results ■■ -
sp_hit_id Q01516
Definition sp|Q01516|ALFC1_PEA Fructose-bisphosphate aldolase 1, chloroplastic (Fragment) OS=Pisum sativum
Align length 29
Score (bit) 48.1
E-value 1.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956859|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0026_N13, 5'
         (218 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q01516|ALFC1_PEA Fructose-bisphosphate aldolase 1, chloroplas...    48   1e-05
sp|P16096|ALFC_SPIOL Fructose-bisphosphate aldolase, chloroplast...    45   1e-04
sp|Q9ZU52|ALFC3_ARATH Probable fructose-bisphosphate aldolase 3,...    44   2e-04
sp|Q40677|ALFC_ORYSJ Fructose-bisphosphate aldolase, chloroplast...    42   7e-04
sp|Q944G9|ALFC2_ARATH Probable fructose-bisphosphate aldolase 2,...    42   7e-04
sp|Q01517|ALFC2_PEA Fructose-bisphosphate aldolase 2, chloroplas...    41   0.002
sp|Q9SJU4|ALFC1_ARATH Probable fructose-bisphosphate aldolase 1,...    38   0.014
sp|Q42690|ALFC_CHLRE Fructose-bisphosphate aldolase 1, chloropla...    36   0.068
sp|P46256|ALF1_PEA Fructose-bisphosphate aldolase, cytoplasmic i...    33   0.57 
sp|P22197|ALF_ARATH Fructose-bisphosphate aldolase, cytoplasmic ...    32   1.3  
sp|Q86A67|ALF_DICDI Fructose-bisphosphate aldolase OS=Dictyostel...    29   8.3  

>sp|Q01516|ALFC1_PEA Fructose-bisphosphate aldolase 1, chloroplastic
           (Fragment) OS=Pisum sativum PE=1 SV=1
          Length = 356

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 24/29 (82%), Positives = 27/29 (93%)
 Frame = +1

Query: 127 LSIRAGSYANELVNTAKSIASKGRGILAM 213
           L+IRAGSYA+ELV TAK+IAS GRGILAM
Sbjct: 2   LTIRAGSYADELVKTAKTIASPGRGILAM 30


>sp|P16096|ALFC_SPIOL Fructose-bisphosphate aldolase, chloroplastic
           OS=Spinacia oleracea PE=1 SV=3
          Length = 394

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 21/29 (72%), Positives = 26/29 (89%)
 Frame = +1

Query: 127 LSIRAGSYANELVNTAKSIASKGRGILAM 213
           L++RA SYA+ELV TAK++AS GRGILAM
Sbjct: 42  LTVRASSYADELVKTAKTVASPGRGILAM 70


>sp|Q9ZU52|ALFC3_ARATH Probable fructose-bisphosphate aldolase 3,
           chloroplastic OS=Arabidopsis thaliana GN=FBA3 PE=1 SV=1
          Length = 391

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 21/28 (75%), Positives = 26/28 (92%)
 Frame = +1

Query: 130 SIRAGSYANELVNTAKSIASKGRGILAM 213
           +IRAG+Y++ELV TAKSIAS GRGILA+
Sbjct: 38  AIRAGAYSDELVKTAKSIASPGRGILAI 65


>sp|Q40677|ALFC_ORYSJ Fructose-bisphosphate aldolase, chloroplastic
           OS=Oryza sativa subsp. japonica GN=Os11g0171300 PE=1
           SV=2
          Length = 388

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 20/27 (74%), Positives = 24/27 (88%)
 Frame = +1

Query: 133 IRAGSYANELVNTAKSIASKGRGILAM 213
           +RAG+Y +ELV TAK+IAS GRGILAM
Sbjct: 36  VRAGAYDDELVKTAKTIASPGRGILAM 62


>sp|Q944G9|ALFC2_ARATH Probable fructose-bisphosphate aldolase 2,
           chloroplastic OS=Arabidopsis thaliana GN=FBA2 PE=1 SV=1
          Length = 398

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 23/32 (71%), Positives = 27/32 (84%), Gaps = 1/32 (3%)
 Frame = +1

Query: 121 TPLSIRAGS-YANELVNTAKSIASKGRGILAM 213
           T L++RA S YA+ELV TAK+IAS GRGILAM
Sbjct: 41  TSLTVRAASSYADELVKTAKTIASPGRGILAM 72


>sp|Q01517|ALFC2_PEA Fructose-bisphosphate aldolase 2, chloroplastic
           OS=Pisum sativum PE=1 SV=2
          Length = 349

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 20/24 (83%), Positives = 22/24 (91%)
 Frame = +1

Query: 142 GSYANELVNTAKSIASKGRGILAM 213
           GSYA+ELV TAK+IAS GRGILAM
Sbjct: 1   GSYADELVKTAKTIASPGRGILAM 24


>sp|Q9SJU4|ALFC1_ARATH Probable fructose-bisphosphate aldolase 1,
           chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2
          Length = 399

 Score = 38.1 bits (87), Expect = 0.014
 Identities = 20/30 (66%), Positives = 25/30 (83%), Gaps = 1/30 (3%)
 Frame = +1

Query: 127 LSIRAGS-YANELVNTAKSIASKGRGILAM 213
           L++RA S YA+ELV TAK+IAS G GI+AM
Sbjct: 44  LTVRAASAYADELVKTAKTIASPGHGIMAM 73


>sp|Q42690|ALFC_CHLRE Fructose-bisphosphate aldolase 1,
           chloroplastic OS=Chlamydomonas reinhardtii GN=ALDCHL
           PE=2 SV=1
          Length = 374

 Score = 35.8 bits (81), Expect = 0.068
 Identities = 16/24 (66%), Positives = 19/24 (79%)
 Frame = +1

Query: 142 GSYANELVNTAKSIASKGRGILAM 213
           G Y  EL+ TA ++ASKGRGILAM
Sbjct: 28  GKYDEELIKTAGTVASKGRGILAM 51


>sp|P46256|ALF1_PEA Fructose-bisphosphate aldolase, cytoplasmic
           isozyme 1 OS=Pisum sativum PE=2 SV=1
          Length = 357

 Score = 32.7 bits (73), Expect = 0.57
 Identities = 15/28 (53%), Positives = 20/28 (71%)
 Frame = +1

Query: 127 LSIRAGSYANELVNTAKSIASKGRGILA 210
           +S   G YA+EL+  AK IA+ G+GILA
Sbjct: 1   MSAFVGKYADELIKNAKYIATPGKGILA 28


>sp|P22197|ALF_ARATH Fructose-bisphosphate aldolase, cytoplasmic
           isozyme OS=Arabidopsis thaliana GN=At4g26520 PE=2 SV=2
          Length = 358

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 15/28 (53%), Positives = 19/28 (67%)
 Frame = +1

Query: 127 LSIRAGSYANELVNTAKSIASKGRGILA 210
           +S     Y +EL+ TAK IA+ GRGILA
Sbjct: 1   MSAFVSKYEDELIKTAKYIATPGRGILA 28
tr_hit_id Q945R0
Definition tr|Q945R0|Q945R0_MEDSA Fructose-bisphosphate aldolase (Fragment) OS=Medicago sativa
Align length 29
Score (bit) 48.1
E-value 0.0002
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956859|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0026_N13, 5'
         (218 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q945R0|Q945R0_MEDSA Fructose-bisphosphate aldolase (Fragment)...    48   2e-04
tr|Q5PYQ2|Q5PYQ2_MANES Fructose-bisphosphate aldolase (Fragment)...    48   2e-04
tr|B7FIL9|B7FIL9_MEDTR Putative uncharacterized protein OS=Medic...    48   2e-04
tr|A7QE19|A7QE19_VITVI Fructose-bisphosphate aldolase OS=Vitis v...    48   2e-04
tr|A5BDH7|A5BDH7_VITVI Fructose-bisphosphate aldolase OS=Vitis v...    48   2e-04
tr|A9PJC9|A9PJC9_POPJC Fructose-bisphosphate aldolase OS=Populus...    48   3e-04
tr|A9PGS7|A9PGS7_POPTR Fructose-bisphosphate aldolase OS=Populus...    48   3e-04
tr|A9PJ44|A9PJ44_POPJC Fructose-bisphosphate aldolase OS=Populus...    47   4e-04
tr|A9NUC9|A9NUC9_PICSI Fructose-bisphosphate aldolase OS=Picea s...    46   8e-04
tr|A9PGW0|A9PGW0_POPTR Fructose-bisphosphate aldolase OS=Populus...    46   0.001
tr|Q6T706|Q6T706_TRIPR Fructose-bisphosphate aldolase OS=Trifoli...    45   0.001
tr|Q2PEX4|Q2PEX4_TRIPR Fructose-bisphosphate aldolase OS=Trifoli...    45   0.001
tr|Q2PER4|Q2PER4_TRIPR Fructose-bisphosphate aldolase OS=Trifoli...    45   0.001
tr|Q19U50|Q19U50_STERE Fructose-bisphosphate aldolase (Fragment)...    45   0.001
tr|B0YQX2|B0YQX2_GOSAR Fructose-bisphosphate aldolase OS=Gossypi...    45   0.001
tr|A6Y873|A6Y873_GOSAR Fructose-bisphosphate aldolase OS=Gossypi...    45   0.001
tr|Q9SXX4|Q9SXX4_NICPA Fructose-bisphosphate aldolase OS=Nicotia...    45   0.002
tr|Q8LL68|Q8LL68_HEVBR Fructose-bisphosphate aldolase OS=Hevea b...    45   0.002
tr|A9NX65|A9NX65_PICSI Fructose-bisphosphate aldolase OS=Picea s...    45   0.002
tr|A9NVA7|A9NVA7_PICSI Fructose-bisphosphate aldolase OS=Picea s...    45   0.002
tr|A9NUH5|A9NUH5_PICSI Fructose-bisphosphate aldolase OS=Picea s...    45   0.002
tr|Q8LK59|Q8LK59_METGY Fructose-bisphosphate aldolase OS=Metaseq...    43   0.009
tr|A7P3F7|A7P3F7_VITVI Fructose-bisphosphate aldolase OS=Vitis v...    43   0.009
tr|Q53P96|Q53P96_ORYSJ Fructose-bisphosphate aldolase OS=Oryza s...    42   0.012
tr|Q3E716|Q3E716_ARATH Fructose-bisphosphate aldolase OS=Arabido...    42   0.012
tr|Q2R9Z9|Q2R9Z9_ORYSJ Fructose-bisphosphate aldolase OS=Oryza s...    42   0.012
tr|O22486|O22486_ORYSA Fructose-bisphosphate aldolase OS=Oryza s...    42   0.012
tr|B6TI65|B6TI65_MAIZE Fructose-bisphosphate aldolase OS=Zea may...    42   0.012
tr|B4FTI5|B4FTI5_MAIZE Putative uncharacterized protein OS=Zea m...    42   0.012
tr|A9PEU6|A9PEU6_POPTR Fructose-bisphosphate aldolase OS=Populus...    42   0.012

>tr|Q945R0|Q945R0_MEDSA Fructose-bisphosphate aldolase (Fragment)
           OS=Medicago sativa PE=2 SV=1
          Length = 194

 Score = 48.1 bits (113), Expect = 2e-04
 Identities = 24/29 (82%), Positives = 27/29 (93%)
 Frame = +1

Query: 127 LSIRAGSYANELVNTAKSIASKGRGILAM 213
           L+IRAGSYA+ELV TAK+IAS GRGILAM
Sbjct: 44  LTIRAGSYADELVKTAKTIASPGRGILAM 72


>tr|Q5PYQ2|Q5PYQ2_MANES Fructose-bisphosphate aldolase (Fragment)
           OS=Manihot esculenta PE=2 SV=1
          Length = 315

 Score = 48.1 bits (113), Expect = 2e-04
 Identities = 24/29 (82%), Positives = 27/29 (93%)
 Frame = +1

Query: 127 LSIRAGSYANELVNTAKSIASKGRGILAM 213
           L+IRAGSYA+ELV TAK+IAS GRGILAM
Sbjct: 42  LTIRAGSYADELVKTAKTIASPGRGILAM 70


>tr|B7FIL9|B7FIL9_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 400

 Score = 48.1 bits (113), Expect = 2e-04
 Identities = 24/29 (82%), Positives = 27/29 (93%)
 Frame = +1

Query: 127 LSIRAGSYANELVNTAKSIASKGRGILAM 213
           L+IRAGSYA+ELV TAK+IAS GRGILAM
Sbjct: 46  LTIRAGSYADELVKTAKTIASPGRGILAM 74


>tr|A7QE19|A7QE19_VITVI Fructose-bisphosphate aldolase OS=Vitis
           vinifera GN=GSVIVT00036826001 PE=3 SV=1
          Length = 396

 Score = 48.1 bits (113), Expect = 2e-04
 Identities = 24/29 (82%), Positives = 27/29 (93%)
 Frame = +1

Query: 127 LSIRAGSYANELVNTAKSIASKGRGILAM 213
           L+IRAGSYA+ELV TAK+IAS GRGILAM
Sbjct: 42  LTIRAGSYADELVKTAKTIASPGRGILAM 70


>tr|A5BDH7|A5BDH7_VITVI Fructose-bisphosphate aldolase OS=Vitis
           vinifera GN=GSVIVT00035963001 PE=3 SV=1
          Length = 398

 Score = 48.1 bits (113), Expect = 2e-04
 Identities = 24/29 (82%), Positives = 27/29 (93%)
 Frame = +1

Query: 127 LSIRAGSYANELVNTAKSIASKGRGILAM 213
           L+IRAGSYA+ELV TAK+IAS GRGILAM
Sbjct: 44  LTIRAGSYADELVKTAKTIASPGRGILAM 72


>tr|A9PJC9|A9PJC9_POPJC Fructose-bisphosphate aldolase OS=Populus
           jackii PE=2 SV=1
          Length = 396

 Score = 47.8 bits (112), Expect = 3e-04
 Identities = 23/29 (79%), Positives = 27/29 (93%)
 Frame = +1

Query: 127 LSIRAGSYANELVNTAKSIASKGRGILAM 213
           L++RAGSYA+ELV TAK+IAS GRGILAM
Sbjct: 42  LTVRAGSYADELVKTAKTIASPGRGILAM 70


>tr|A9PGS7|A9PGS7_POPTR Fructose-bisphosphate aldolase OS=Populus
           trichocarpa PE=2 SV=1
          Length = 396

 Score = 47.8 bits (112), Expect = 3e-04
 Identities = 23/29 (79%), Positives = 27/29 (93%)
 Frame = +1

Query: 127 LSIRAGSYANELVNTAKSIASKGRGILAM 213
           L++RAGSYA+ELV TAK+IAS GRGILAM
Sbjct: 42  LTVRAGSYADELVKTAKTIASPGRGILAM 70


>tr|A9PJ44|A9PJ44_POPJC Fructose-bisphosphate aldolase OS=Populus
           jackii PE=2 SV=1
          Length = 396

 Score = 47.4 bits (111), Expect = 4e-04
 Identities = 23/29 (79%), Positives = 26/29 (89%)
 Frame = +1

Query: 127 LSIRAGSYANELVNTAKSIASKGRGILAM 213
           L++RAGSYA ELV TAK+IAS GRGILAM
Sbjct: 42  LTVRAGSYAEELVKTAKTIASPGRGILAM 70


>tr|A9NUC9|A9NUC9_PICSI Fructose-bisphosphate aldolase OS=Picea
           sitchensis PE=2 SV=1
          Length = 398

 Score = 46.2 bits (108), Expect = 8e-04
 Identities = 21/31 (67%), Positives = 26/31 (83%)
 Frame = +1

Query: 121 TPLSIRAGSYANELVNTAKSIASKGRGILAM 213
           T LS+RAG+Y+ EL+ TAK +AS GRGILAM
Sbjct: 42  TALSVRAGAYSEELIKTAKRVASPGRGILAM 72


>tr|A9PGW0|A9PGW0_POPTR Fructose-bisphosphate aldolase OS=Populus
           trichocarpa PE=2 SV=1
          Length = 396

 Score = 45.8 bits (107), Expect = 0.001
 Identities = 22/29 (75%), Positives = 25/29 (86%)
 Frame = +1

Query: 127 LSIRAGSYANELVNTAKSIASKGRGILAM 213
           L++R GSYA ELV TAK+IAS GRGILAM
Sbjct: 42  LTVRTGSYAEELVKTAKTIASPGRGILAM 70