| DK956861 |
| Clone id |
TST39A01NGRL0026_N15 |
| Library |
TST39 |
| Length |
574 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0026_N15. 5' end sequence. |
| Accession |
DK956861 |
| Tissue type |
prothallia with plantlets |
| Developmental stage |
gametophytes with sporophytes |
| Contig ID |
CL2953Contig1 |
| Sequence |
TTTCTCCATCCCCTCACAGATTAAACGCAGCGGGCTGCTTCATCAGATCCAGTTGGGCAA
GCTTTTTATTGCAAAGATGGCAGATGGTGATGAAGTTCAGCCACTTGTTTGTGACAATGG
GTCTGGCATGGTCAAGGCTGGCTTTGCTGGAGATGATGCCCCACGGGCAGTCTTTCCTAG
CATCGTAGGTCGCCCTCGACACACTGGTGTTATGGTAGGGATGGGACAGAAAGATGCATA
TGTTGGTGATGAGGCCCAGTCCAAGCGGGGGATCTTGACCTTGAAATATCCGATTGAGCA
TGGCATTGTGACCAACTGGGATGACATGGAAAAGATATGGCACCATACCTTCTACAACGA
GCTTCGAGTTGCCCCTGAAGAGCATCCTGTCTTACTCACCGAAGCACCTCTCAATCCCAA
GGCTAACCGAGAGAAGATGACACAAATTATGTTCGATACCTTCAATGCGCCAGCTATGTA
TGTTGCCATCCAGGCTGTGCTTTCCTTGTACGCTAGTGGAAGGACTACAGGTATTGTGCT
GGATTCTGGCGAAGGTGTTACTCATACAGTACCG |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q10AZ4 |
| Definition |
sp|Q10AZ4|ACT3_ORYSJ Actin-3 OS=Oryza sativa subsp. japonica |
| Align length |
166 |
| Score (bit) |
333.0 |
| E-value |
3.0e-91 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A9TYG3 |
| Definition |
tr|A9TYG3|A9TYG3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
| Align length |
166 |
| Score (bit) |
337.0 |
| E-value |
4.0e-91 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK956861|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0026_N15, 5'
(574 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A9TYG3|A9TYG3_PHYPA Predicted protein OS=Physcomitrella paten... 337 4e-91
tr|O82564|O82564_ANEPH Actin 2 OS=Anemia phyllitidis PE=2 SV=1 336 5e-91
tr|Q6TYS2|Q6TYS2_PHYPA Actin 1 OS=Physcomitrella patens GN=Act1 ... 335 8e-91
tr|A9TVP1|A9TVP1_PHYPA Predicted protein OS=Physcomitrella paten... 335 8e-91
tr|A9TVP0|A9TVP0_PHYPA Predicted protein OS=Physcomitrella paten... 335 8e-91
tr|A3AZ49|A3AZ49_ORYSJ Putative uncharacterized protein OS=Oryza... 334 2e-90
tr|B4FVB1|B4FVB1_MAIZE Putative uncharacterized protein OS=Zea m... 334 2e-90
tr|B8AMT7|B8AMT7_ORYSI Putative uncharacterized protein OS=Oryza... 333 3e-90
tr|B7E8U0|B7E8U0_ORYSJ cDNA clone:001-118-B07, full insert seque... 333 3e-90
tr|Q9M4Y2|Q9M4Y2_9ASPA Actin-like protein OS=Phalaenopsis hybrid... 332 9e-90
tr|Q8H1Y3|Q8H1Y3_9ASPA Actin OS=Phalaenopsis hybrid cultivar GN=... 332 9e-90
tr|O82565|O82565_ANEPH Actin 3 OS=Anemia phyllitidis PE=2 SV=1 332 9e-90
tr|Q2QLI5|Q2QLI5_ORYSJ Os12g0641000 protein OS=Oryza sativa subs... 332 1e-89
tr|B8AWW7|B8AWW7_ORYSI Putative uncharacterized protein OS=Oryza... 332 1e-89
tr|A8W4W6|A8W4W6_9FABA Actin OS=Glycyrrhiza uralensis PE=2 SV=1 332 1e-89
tr|A5BXV1|A5BXV1_VITVI Chromosome chr13 scaffold_17, whole genom... 332 1e-89
tr|A2ZN74|A2ZN74_ORYSI Putative uncharacterized protein OS=Oryza... 332 1e-89
tr|Q9FUS4|Q9FUS4_SETIT Actin OS=Setaria italica PE=2 SV=1 331 2e-89
tr|Q94G12|Q94G12_MUSPR Actin OS=Musa ABB Group GN=ACT1 PE=3 SV=1 331 2e-89
tr|Q94DL4|Q94DL4_ORYSJ cDNA, clone: J100088I07, full insert sequ... 331 2e-89
tr|Q947D0|Q947D0_TRIMO Actin (Fragment) OS=Triticum monococcum G... 331 2e-89
tr|Q8H1L9|Q8H1L9_HORVU Actin OS=Hordeum vulgare PE=2 SV=1 331 2e-89
tr|Q7XZK0|Q7XZK0_GOSHI Actin OS=Gossypium hirsutum GN=ACT2 PE=2 ... 331 2e-89
tr|Q7XZJ1|Q7XZJ1_GOSHI Actin OS=Gossypium hirsutum GN=ACT14 PE=2... 331 2e-89
tr|Q6PZE5|Q6PZE5_BRANA Actin (Fragment) OS=Brassica napus var. n... 331 2e-89
tr|Q6F4H4|Q6F4H4_TOBAC Actin OS=Nicotiana tabacum PE=2 SV=1 331 2e-89
tr|Q67G20|Q67G20_ORYSJ Actin-7, putative, expressed OS=Oryza sat... 331 2e-89
tr|Q65XH8|Q65XH8_ORYSJ Os05g0106600 protein OS=Oryza sativa subs... 331 2e-89
tr|Q5XPX5|Q5XPX5_SACOF Actin OS=Saccharum officinarum PE=2 SV=1 331 2e-89
tr|Q5EWZ5|Q5EWZ5_TRITU Actin OS=Triticum turgidum GN=ACT-1 PE=3 ... 331 2e-89
>tr|A9TYG3|A9TYG3_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_226658 PE=3 SV=1
Length = 377
Score = 337 bits (863), Expect = 4e-91
Identities = 161/166 (96%), Positives = 165/166 (99%)
Frame = +2
Query: 77 MADGDEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 256
MADG+EVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MADGEEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 257 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 436
QSKRGILTLKYPIEHG+VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGVVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 437 MTQIMFDTFNAPAMYVAIQAVLSLYASGRTTGIVLDSGEGVTHTVP 574
MTQIMF+TFN PAMYVAIQAVLSLYASGRTTGIVLDSG+GVTHTVP
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVP 166
>tr|O82564|O82564_ANEPH Actin 2 OS=Anemia phyllitidis PE=2 SV=1
Length = 377
Score = 336 bits (862), Expect = 5e-91
Identities = 162/166 (97%), Positives = 164/166 (98%)
Frame = +2
Query: 77 MADGDEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 256
M D +EVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MGDAEEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 257 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 436
QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 437 MTQIMFDTFNAPAMYVAIQAVLSLYASGRTTGIVLDSGEGVTHTVP 574
MTQIMFDTFNAPAMYVAIQAVLSLYASGRTTGIVLDSG+GVTHTVP
Sbjct: 121 MTQIMFDTFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVP 166
>tr|Q6TYS2|Q6TYS2_PHYPA Actin 1 OS=Physcomitrella patens GN=Act1
PE=3 SV=1
Length = 377
Score = 335 bits (860), Expect = 8e-91
Identities = 160/166 (96%), Positives = 165/166 (99%)
Frame = +2
Query: 77 MADGDEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 256
MADG+EVQPLVCDNG+GMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MADGEEVQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 257 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 436
QSKRGILTLKYPIEHG+VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGVVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 437 MTQIMFDTFNAPAMYVAIQAVLSLYASGRTTGIVLDSGEGVTHTVP 574
MTQIMF+TFN PAMYVAIQAVLSLYASGRTTGIVLDSG+GVTHTVP
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVP 166
>tr|A9TVP1|A9TVP1_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_225906 PE=3 SV=1
Length = 377
Score = 335 bits (860), Expect = 8e-91
Identities = 160/166 (96%), Positives = 165/166 (99%)
Frame = +2
Query: 77 MADGDEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 256
MADG++VQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MADGEDVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 257 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 436
QSKRGILTLKYPIEHG+VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGVVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 437 MTQIMFDTFNAPAMYVAIQAVLSLYASGRTTGIVLDSGEGVTHTVP 574
MTQIMF+TFN PAMYVAIQAVLSLYASGRTTGIVLDSG+GVTHTVP
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVP 166
>tr|A9TVP0|A9TVP0_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_198730 PE=3 SV=1
Length = 377
Score = 335 bits (860), Expect = 8e-91
Identities = 160/166 (96%), Positives = 165/166 (99%)
Frame = +2
Query: 77 MADGDEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 256
MADG+EVQPLVCDNG+GMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MADGEEVQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 257 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 436
QSKRGILTLKYPIEHG+VTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGVVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 437 MTQIMFDTFNAPAMYVAIQAVLSLYASGRTTGIVLDSGEGVTHTVP 574
MTQIMF+TFN PAMYVAIQAVLSLYASGRTTGIVLDSG+GVTHTVP
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVP 166
>tr|A3AZ49|A3AZ49_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_016071 PE=3 SV=1
Length = 389
Score = 334 bits (857), Expect = 2e-90
Identities = 158/169 (93%), Positives = 168/169 (99%)
Frame = +2
Query: 68 IAKMADGDEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVG 247
+A+MADG+++QPLVCDNG+GMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVG
Sbjct: 10 VAEMADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVG 69
Query: 248 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 427
DEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 70 DEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 129
Query: 428 REKMTQIMFDTFNAPAMYVAIQAVLSLYASGRTTGIVLDSGEGVTHTVP 574
REKMTQIMF+TFN PAMYVAIQAVLSLYASGRTTGIVLDSG+GV+HTVP
Sbjct: 130 REKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVP 178
>tr|B4FVB1|B4FVB1_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 377
Score = 334 bits (856), Expect = 2e-90
Identities = 159/166 (95%), Positives = 165/166 (99%)
Frame = +2
Query: 77 MADGDEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 256
MADG+++QPLVCDNG+GMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 257 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 436
QSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 437 MTQIMFDTFNAPAMYVAIQAVLSLYASGRTTGIVLDSGEGVTHTVP 574
MTQIMF+TFNAPAMYVAIQAVLSLYASGRTTGIVLDSG+GVTHTVP
Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVP 166
>tr|B8AMT7|B8AMT7_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_14218 PE=4 SV=1
Length = 377
Score = 333 bits (855), Expect = 3e-90
Identities = 158/166 (95%), Positives = 165/166 (99%)
Frame = +2
Query: 77 MADGDEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 256
MADG+++QPLVCDNG+GMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 257 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 436
QSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
Query: 437 MTQIMFDTFNAPAMYVAIQAVLSLYASGRTTGIVLDSGEGVTHTVP 574
MTQIMF+TFNAPAMYVAIQAVLSLYASGRTTGIVLDSG+GVTHTVP
Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVP 166
>tr|B7E8U0|B7E8U0_ORYSJ cDNA clone:001-118-B07, full insert sequence
OS=Oryza sativa subsp. japonica PE=2 SV=1
Length = 377
Score = 333 bits (855), Expect = 3e-90
Identities = 158/166 (95%), Positives = 165/166 (99%)
Frame = +2
Query: 77 MADGDEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 256
MADG+++QPLVCDNG+GMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 257 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 436
QSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
Query: 437 MTQIMFDTFNAPAMYVAIQAVLSLYASGRTTGIVLDSGEGVTHTVP 574
MTQIMF+TFNAPAMYVAIQAVLSLYASGRTTGIVLDSG+GVTHTVP
Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVP 166
>tr|Q9M4Y2|Q9M4Y2_9ASPA Actin-like protein OS=Phalaenopsis hybrid
cultivar GN=ACT1 PE=2 SV=1
Length = 377
Score = 332 bits (851), Expect = 9e-90
Identities = 157/166 (94%), Positives = 166/166 (100%)
Frame = +2
Query: 77 MADGDEVQPLVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 256
MA+G+E+QPLVCDNG+GMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MAEGEEIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 257 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 436
QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREK
Sbjct: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
Query: 437 MTQIMFDTFNAPAMYVAIQAVLSLYASGRTTGIVLDSGEGVTHTVP 574
MTQIMF+TFNAPAMYVAIQAVLSLYASGRTTGIVLDSG+GV+HTVP
Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVP 166
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