DK956894 |
Clone id |
TST39A01NGRL0026_P01 |
Library |
TST39 |
Length |
631 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0026_P01. 5' end sequence. |
Accession |
DK956894 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1602Contig1 |
Sequence |
GCTGAAGATATGGAAGCTACGGGCCTGGGCTTAAGACTATATCCTTTGCCGTCGACGTCT CCTGCTGCCGCTTCGTTTTCACGCAGATTAAGACTCTCTCAGACCCTCCTTCGTCGGCCC CGTCTCTTCTCGCACAATTGTGCACGCATTTTCGCATCAGCAGCAGAAGAATCAGAAGAT GAGGAGAGCGCTGGGCCTTCTAGATCCATAGGCCTTTCTGCAGATGACCTCGAACAAAGG CTTGGAAAGCGTAGGCGGTCGCGCAAAGAAAAGCCTAACGCAGATAGCGTCGATCCCAAG CCTCCGCCGAAGGATTGGGAGTCCATGACTCTCGCAGAGAAGGCATGGGAAATTTACGTT GGTGAAAAGGGAGCCCTTTTCTGGCTGAACAAGATTGCCTATGCTGCAATTTTTGTGATC GTGGGAGGTTGGATCGCGTTTCGGTTTGTCGGCCCTGCACTGAACCTTTACCAGCTTGAC AGTCCCCTTCTTCCACCGACTGAGGTCCTCAGTGGATCATCGAAATGAGGTATTCTTCAC CTCCTCATCACTGATCTTGGTTTTGTTACTATGCAGAGGTATTATGGGCAGATTAACGGT GCTTAGGATCACACCCCATATTGTATAATTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q3ZBJ8 |
Definition |
sp|Q3ZBJ8|MFRN1_BOVIN Mitoferrin-1 OS=Bos taurus |
Align length |
65 |
Score (bit) |
34.3 |
E-value |
0.55 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SQL7 |
Definition |
tr|A9SQL7|A9SQL7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
114 |
Score (bit) |
136.0 |
E-value |
9.0e-31 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK956894|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0026_P01, 5' (631 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SQL7|A9SQL7_PHYPA Predicted protein OS=Physcomitrella paten... 136 9e-31 tr|B7FLL9|B7FLL9_MEDTR Putative uncharacterized protein OS=Medic... 125 2e-27 tr|A9NKY5|A9NKY5_PICSI Putative uncharacterized protein OS=Picea... 120 5e-26 tr|A7QDZ1|A7QDZ1_VITVI Chromosome chr4 scaffold_83, whole genome... 120 7e-26 tr|Q8LDU3|Q8LDU3_ARATH Putative uncharacterized protein OS=Arabi... 112 1e-23 tr|Q8S8K0|Q8S8K0_ARATH Expressed protein (Putative uncharacteriz... 112 2e-23 tr|B6TLH7|B6TLH7_MAIZE Putative uncharacterized protein OS=Zea m... 112 2e-23 tr|Q5Z9P9|Q5Z9P9_ORYSJ Os06g0715200 protein OS=Oryza sativa subs... 110 5e-23 tr|A2YGZ6|A2YGZ6_ORYSI Putative uncharacterized protein OS=Oryza... 110 5e-23 tr|B6T6P1|B6T6P1_MAIZE Putative uncharacterized protein OS=Zea m... 108 3e-22 tr|A8I5G0|A8I5G0_CHLRE Predicted protein OS=Chlamydomonas reinha... 90 1e-16 tr|Q00SS6|Q00SS6_OSTTA Chromosome 18 contig 1, DNA sequence OS=O... 62 3e-08 tr|A5B5L4|A5B5L4_VITVI Putative uncharacterized protein OS=Vitis... 61 6e-08 tr|A4S9R5|A4S9R5_OSTLU Predicted protein OS=Ostreococcus lucimar... 59 2e-07 tr|A4S1E7|A4S1E7_OSTLU Predicted protein OS=Ostreococcus lucimar... 37 0.76 tr|Q8J3E7|Q8J3E7_9HIV1 Gp120 protein (Fragment) OS=Human immunod... 35 3.7 tr|Q0S7F6|Q0S7F6_RHOSR Putative uncharacterized protein OS=Rhodo... 35 3.7 tr|A4J196|A4J196_DESRM Transposase and inactivated derivatives-l... 35 4.9 tr|Q9U919|Q9U919_9TRYP PTGT-4 protein OS=Trypanosoma brucei GN=p... 35 4.9 tr|Q5C292|Q5C292_SCHJA SJCHGC03959 protein (Fragment) OS=Schisto... 35 4.9 tr|Q1MHS6|Q1MHS6_RHIL3 Putative nitrate transport protein OS=Rhi... 34 6.4 tr|B2MVX8|B2MVX8_SHEEP SLC25A37 OS=Ovis aries PE=2 SV=1 34 6.4 tr|Q8J3E6|Q8J3E6_9HIV1 Gp120 protein (Fragment) OS=Human immunod... 34 8.3 tr|Q8J3E5|Q8J3E5_9HIV1 Gp120 protein (Fragment) OS=Human immunod... 34 8.3 tr|A8XSR4|A8XSR4_CAEBR Putative uncharacterized protein OS=Caeno... 34 8.3
>tr|A9SQL7|A9SQL7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_166191 PE=4 SV=1 Length = 237
Score = 136 bits (343), Expect = 9e-31 Identities = 63/114 (55%), Positives = 83/114 (72%), Gaps = 4/114 (3%) Frame = +1
Query: 193 GPSRSIGLSADDLEQRLGKRRRSRKEKPNADSVDPKPPP----KDWESMTLAEKAWEIYV 360 G S + ++LE RLG R+SR+E S P P P K W+ M+LAEKAW++Y+ Sbjct: 70 GSSEADARRLEELEARLGVNRKSRREGGGVQSPPPAPKPAAPAKAWDDMSLAEKAWQLYI 129
Query: 361 GEKGALFWLNKIAYAAIFVIVGGWIAFRFVGPALNLYQLDSPLLPPTEVLSGSS 522 GE+GALFWLNK AYA+IF+I+GGWI FRFVGPAL Y+L SPLLPP +V++G++ Sbjct: 130 GEEGALFWLNKAAYASIFIIIGGWIVFRFVGPALGWYELSSPLLPPEQVIAGTA 183
>tr|B7FLL9|B7FLL9_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 183
Score = 125 bits (314), Expect = 2e-27 Identities = 63/109 (57%), Positives = 79/109 (72%), Gaps = 8/109 (7%) Frame = +1
Query: 220 ADDLEQRLGKR--RRSRKEKPNADSVDP------KPPPKDWESMTLAEKAWEIYVGEKGA 375 A+ +E RL +R R++RK++ N + K PK WE M+ EKA E+YVGEKGA Sbjct: 75 AEPVELRLRRRSKRQARKQRENGTLTNSIRQPKAKAAPKKWEDMSFTEKALELYVGEKGA 134
Query: 376 LFWLNKIAYAAIFVIVGGWIAFRFVGPALNLYQLDSPLLPPTEVLSGSS 522 LFWLNK AYA+IF+++G WIAFRFVGPALN+YQLD PLL P +VL GSS Sbjct: 135 LFWLNKFAYASIFIMIGLWIAFRFVGPALNIYQLDQPLLSPEDVLKGSS 183
>tr|A9NKY5|A9NKY5_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 175
Score = 120 bits (302), Expect = 5e-26 Identities = 58/108 (53%), Positives = 77/108 (71%) Frame = +1
Query: 193 GPSRSIGLSADDLEQRLGKRRRSRKEKPNADSVDPKPPPKDWESMTLAEKAWEIYVGEKG 372 GPS S L + ++ LG+R R ++++ + + P P KDWESMTL EKA E+Y+GEKG Sbjct: 68 GPSPS-RLESLEVRAGLGRRARRKRDRVSDPNQVPVPKKKDWESMTLQEKAVEVYMGEKG 126
Query: 373 ALFWLNKIAYAAIFVIVGGWIAFRFVGPALNLYQLDSPLLPPTEVLSG 516 LFWLNK AYA+IF+++G W+ FRFVGP L LYQL+S LL PT+ G Sbjct: 127 ILFWLNKSAYASIFILIGAWVLFRFVGPLLGLYQLESNLLEPTKAFGG 174
>tr|A7QDZ1|A7QDZ1_VITVI Chromosome chr4 scaffold_83, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00036793001 PE=4 SV=1 Length = 178
Score = 120 bits (301), Expect = 7e-26 Identities = 56/101 (55%), Positives = 73/101 (72%), Gaps = 6/101 (5%) Frame = +1
Query: 235 QRLGKRRRSRKEKPN------ADSVDPKPPPKDWESMTLAEKAWEIYVGEKGALFWLNKI 396 +R K+RR +++ A++ PPPKDW+ M++ EKA E+YVGEKGALFWLNK Sbjct: 78 RRGSKKRRQMQQQDGGVANKAAEASSTTPPPKDWKDMSITEKAIELYVGEKGALFWLNKF 137
Query: 397 AYAAIFVIVGGWIAFRFVGPALNLYQLDSPLLPPTEVLSGS 519 AYA+IF+++G WI FRFVGPALNLYQLDS L P+ + GS Sbjct: 138 AYASIFIVIGAWILFRFVGPALNLYQLDSAPLSPSSLFKGS 178
>tr|Q8LDU3|Q8LDU3_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 158
Score = 112 bits (281), Expect = 1e-23 Identities = 58/114 (50%), Positives = 71/114 (62%), Gaps = 6/114 (5%) Frame = +1
Query: 193 GPSRSIGLSADDLEQRL--GKRRRSRKEKPNA----DSVDPKPPPKDWESMTLAEKAWEI 354 G I D +E R G RR+ R+E + K WE MTL EKA E+ Sbjct: 45 GDEEKITQPLDGVEIRFKRGSRRKMREEGSGEGGGQSGKKKETVQKPWEEMTLNEKALEL 104
Query: 355 YVGEKGALFWLNKIAYAAIFVIVGGWIAFRFVGPALNLYQLDSPLLPPTEVLSG 516 YVGEKG LFWLNK+AYA+I++++GGWI FRFVGPA NLYQLD+P L P +L G Sbjct: 105 YVGEKGLLFWLNKLAYASIYIVIGGWILFRFVGPAFNLYQLDTPPLDPKNILKG 158
>tr|Q8S8K0|Q8S8K0_ARATH Expressed protein (Putative uncharacterized protein At2g17972) (Putative uncharacterized protein At2g17972/T27K22.22) OS=Arabidopsis thaliana GN=At2g17972/T27K22.22 PE=2 SV=1 Length = 158
Score = 112 bits (280), Expect = 2e-23 Identities = 58/114 (50%), Positives = 71/114 (62%), Gaps = 6/114 (5%) Frame = +1
Query: 193 GPSRSIGLSADDLEQRL--GKRRRSRKEKPNA----DSVDPKPPPKDWESMTLAEKAWEI 354 G I D +E R G RR+ R+E + K WE MTL EKA E+ Sbjct: 45 GDEEKITQPLDGVEIRFKRGSRRKMREEGSGEGGGQSGKKKETVQKPWEEMTLNEKALEL 104
Query: 355 YVGEKGALFWLNKIAYAAIFVIVGGWIAFRFVGPALNLYQLDSPLLPPTEVLSG 516 YVGEKG LFWLNK+AYA+I++++GGWI FRFVGPA NLYQLD+P L P +L G Sbjct: 105 YVGEKGLLFWLNKLAYASIYIVIGGWIFFRFVGPAFNLYQLDTPPLDPKNILKG 158
>tr|B6TLH7|B6TLH7_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 183
Score = 112 bits (280), Expect = 2e-23 Identities = 55/92 (59%), Positives = 66/92 (71%), Gaps = 6/92 (6%) Frame = +1
Query: 265 KEKPNADSVDPKPPPKD------WESMTLAEKAWEIYVGEKGALFWLNKIAYAAIFVIVG 426 K+KP A + P PK WE M+L EKA ++YVGEKG LFWLNK AYA+IF++VG Sbjct: 92 KKKP-APAASSSPVPKKKVGRKGWEEMSLGEKAVDLYVGEKGLLFWLNKFAYASIFIMVG 150
Query: 427 GWIAFRFVGPALNLYQLDSPLLPPTEVLSGSS 522 W+ FRFVGP+L LYQLD+P LPPT V SG S Sbjct: 151 AWVLFRFVGPSLGLYQLDAPPLPPTAVFSGGS 182
>tr|Q5Z9P9|Q5Z9P9_ORYSJ Os06g0715200 protein OS=Oryza sativa subsp. japonica GN=P0481E08.12 PE=2 SV=1 Length = 193
Score = 110 bits (276), Expect = 5e-23 Identities = 48/70 (68%), Positives = 60/70 (85%) Frame = +1
Query: 310 KDWESMTLAEKAWEIYVGEKGALFWLNKIAYAAIFVIVGGWIAFRFVGPALNLYQLDSPL 489 K+WE M++AEKA E+YVGEKG LFWLNK AYA+IF++VG WI FRFVGP++ LYQLD+P Sbjct: 123 KEWEEMSMAEKAGELYVGEKGLLFWLNKFAYASIFIMVGAWILFRFVGPSIGLYQLDAPP 182
Query: 490 LPPTEVLSGS 519 L PT+V +GS Sbjct: 183 LAPTDVFAGS 192
>tr|A2YGZ6|A2YGZ6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_24461 PE=4 SV=1 Length = 193
Score = 110 bits (276), Expect = 5e-23 Identities = 48/70 (68%), Positives = 60/70 (85%) Frame = +1
Query: 310 KDWESMTLAEKAWEIYVGEKGALFWLNKIAYAAIFVIVGGWIAFRFVGPALNLYQLDSPL 489 K+WE M++AEKA E+YVGEKG LFWLNK AYA+IF++VG WI FRFVGP++ LYQLD+P Sbjct: 123 KEWEEMSMAEKAGELYVGEKGLLFWLNKFAYASIFIMVGAWILFRFVGPSIGLYQLDAPP 182
Query: 490 LPPTEVLSGS 519 L PT+V +GS Sbjct: 183 LAPTDVFAGS 192
>tr|B6T6P1|B6T6P1_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 183
Score = 108 bits (269), Expect = 3e-22 Identities = 54/92 (58%), Positives = 65/92 (70%), Gaps = 6/92 (6%) Frame = +1
Query: 265 KEKPNADSVDPKPPPKD------WESMTLAEKAWEIYVGEKGALFWLNKIAYAAIFVIVG 426 K+KP A + P PK WE M+L EKA ++YVGEKG LF LNK AYA+IF++VG Sbjct: 92 KKKP-APAASSSPAPKKKVGRKGWEEMSLGEKAVDLYVGEKGLLFXLNKFAYASIFIMVG 150
Query: 427 GWIAFRFVGPALNLYQLDSPLLPPTEVLSGSS 522 W+ FRFVGP+L LYQLD+P LPPT V SG S Sbjct: 151 AWVLFRFVGPSLGLYQLDAPPLPPTAVFSGGS 182
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