DK956895
Clone id TST39A01NGRL0026_P02
Library
Length 628
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0026_P02. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GTTTCAAAGCGGGAAAAACAAGAAAAGGGCCCTCCCCGGCTTGCAAAGCTAATATATCAA
CTCTGGGCCTCTGCAAGTACTTCCTGTCTGAGGAAGTGACTGGCTCAATGCGCTAGCTGA
AGGGGTGTTATGACCTTCGCCAAGGACAGGTACCATATTCTTCAGCGGTGTGGCCTTATT
GAACCTACGCTCAGCCTGCCCAGAGAAGAGCACGTAACATGCGGATACGATAAGAGCCAG
GTAGCTAGGTCTACTTGGAGCGTGAGATGCTTAGTGCAGCACAGGTAAGGACTTGAAATT
TGGTCCTTGCTATTTTTACAGCATCAAGTGGCTATCAATGGCTGGGGAGTTATTTGTGCT
TGCTTTACTACAGCGTAAACCGGCCCGCCTTTTTACACACTTCGTAAGCTAATTTGCAGT
AAACATGGAATTCCTTAAACATATGTTAGAGGTGGAAATGTAATTTTGATGAATAGAGTG
CCCAAAGCGGAAGGGTGAAGTCTAGGATTGCTCCAAGCATACTAAGGGTACCTACAAGTG
GAGCTTGAAGATTGTCTTGTGAGGAAGTTCAGGCGCTATTGGAGAGGAAGTATTGCAATG
AGGATGTAGAAAGACGAACAGGATTAAG
■■Homology search results ■■ -
sp_hit_id P22444
Definition sp|P22444|BMP3_BOVIN Bone morphogenetic protein 3 OS=Bos taurus
Align length 56
Score (bit) 31.6
E-value 3.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK956895|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0026_P02, 5'
(628 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P22444|BMP3_BOVIN Bone morphogenetic protein 3 OS=Bos taurus ... 32 3.5
sp|Q8BHE5|BMP3_MOUSE Bone morphogenetic protein 3 OS=Mus musculu... 30 7.7

>sp|P22444|BMP3_BOVIN Bone morphogenetic protein 3 OS=Bos taurus
GN=BMP3 PE=1 SV=2
Length = 475

Score = 31.6 bits (70), Expect = 3.5
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = -3

Query: 278 CTKHLT---LQVDLATWLLSYPHVTCSSLGRLSVGSIRPHR*RIWYLSLAKVITPL 120
C+ H +Q+DL+ W+L LG LSV +PHR + +LS K IT L
Sbjct: 154 CSHHAQRKHIQIDLSAWILKSSGNQSQLLGHLSVDGGKPHRDFVSWLS--KDITQL 207


>sp|Q8BHE5|BMP3_MOUSE Bone morphogenetic protein 3 OS=Mus musculus
GN=Bmp3 PE=2 SV=1
Length = 468

Score = 30.4 bits (67), Expect = 7.7
Identities = 20/52 (38%), Positives = 29/52 (55%)
Frame = -3

Query: 275 TKHLTLQVDLATWLLSYPHVTCSSLGRLSVGSIRPHR*RIWYLSLAKVITPL 120
T+ +Q+DL+ W+L LG LSV +RP+R + +LS K IT L
Sbjct: 154 TQRQHIQIDLSAWILKSNQ--SQLLGHLSVDVVRPYRDSVSWLS--KDITQL 201


tr_hit_id A9NW28
Definition tr|A9NW28|A9NW28_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 68
Score (bit) 34.7
E-value 4.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK956895|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0026_P02, 5'
(628 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9NW28|A9NW28_PICSI Putative uncharacterized protein OS=Picea... 35 4.8
tr|A7Q3S3|A7Q3S3_VITVI Chromosome chr13 scaffold_48, whole genom... 34 6.3

>tr|A9NW28|A9NW28_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 374

Score = 34.7 bits (78), Expect = 4.8
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Frame = +1

Query: 1 VSKREKQEKGPPRLAKLIYQ------LWASASTSCLRK*LAQCAS*RGVMTFAKDRYHIL 162
V+K+E+ KGPPRL + +Q L + T +RK +G T A+DR+ L
Sbjct: 305 VAKQERLAKGPPRLGRSKFQPEPLQVLLSEEITGSIRK-------LKGCCTLARDRFKSL 357

Query: 163 QRCGLIEP 186
Q+ G P
Sbjct: 358 QKRGYFAP 365


>tr|A7Q3S3|A7Q3S3_VITVI Chromosome chr13 scaffold_48, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00029396001
PE=4 SV=1
Length = 378

Score = 34.3 bits (77), Expect = 6.3
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Frame = +1

Query: 1 VSKREKQEKGPPRLAKLIYQ------LWASASTSCLRK*LAQCAS*RGVMTFAKDRYHIL 162
V+K+++ + PPRL K ++ L + T LRK +G T +DRY L
Sbjct: 297 VAKQDRLKSRPPRLGKHKFEPAPVQVLLSEEITGSLRKL-------KGCSTLTRDRYKSL 349

Query: 163 QRCGLIEPTLSLPR 204
Q+ GL+ PT R
Sbjct: 350 QKRGLLVPTAKKSR 363