DK956899
Clone id TST39A01NGRL0026_P06
Library
Length 614
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0026_P06. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
AGCTTACACGTCCCCTGTTTCTCATCGGCAGCCACAATGGCATAGCGATGGTGAGTTGGA
CAGGGTGCGGCCCCGCCTTAAGTAACTTGCAAGCGTTATGCACTGCCCGCTTCCCCAGCA
TAGCATTGGTGTGTGGCAACAGGTTGCGAACCAATATTCAAGGCAATGAATACTCTCCGG
TGCAACATTTCTCAATCAAGGGCAATACTCATCTGCACAGGTCCGCTATTTTATGATTTT
GCTGACTATTTTACAGAATGTTCTCACGTTTTCTTGTTGTGTACTCCTCGCAGCTCAGAA
CTTCTGCCCTCTTTCTTAGGGATGCCCTGTTTTGATAGCGGGTTTGTTTTCTTTAATTAG
ACTTGTTTCTTTTTGGCTTGAGATTTTAACCTGATCTGCTGAATCTTGATTGTGTAGCGA
AGTCATTGTCTAAGCAATTGCATCCAAAGCTGCGAATCATTATCATGCTAGTGTTGATTT
TCAGCCTGGGTCGATCTTGAGTTCCCTTGTGTAGTCAACCTTGTTGCAGTAGTATATAGG
TCGATTTCCGCTGAGGTGGGTATACTATTGTTCTCTATTAACACCGCATTGATTGTTTCA
TTTAACTACATACT
■■Homology search results ■■ -
sp_hit_id P57989
Definition sp|P57989|CSD_PASMU Probable cysteine desulfurase OS=Pasteurella multocida
Align length 20
Score (bit) 31.2
E-value 4.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK956899|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0026_P06, 5'
(614 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P57989|CSD_PASMU Probable cysteine desulfurase OS=Pasteurella... 31 4.4
sp|Q25255|PE44_LUCCU Peritrophin-44 OS=Lucilia cuprina PE=1 SV=1 30 7.5
sp|Q83207|UL33_MCMVS G-protein coupled receptor homolog M33 OS=M... 30 9.8

>sp|P57989|CSD_PASMU Probable cysteine desulfurase OS=Pasteurella
multocida GN=csd PE=3 SV=1
Length = 421

Score = 31.2 bits (69), Expect = 4.4
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3

Query: 405 LDCVAKSLSKQLHPKLRIII 464
++CVA+ LS QLHPK III
Sbjct: 114 INCVARGLSHQLHPKAEIII 133


>sp|Q25255|PE44_LUCCU Peritrophin-44 OS=Lucilia cuprina PE=1 SV=1
Length = 356

Score = 30.4 bits (67), Expect = 7.5
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Frame = +1

Query: 253 TECSHVFLLCTPRSSELLP----SFLGMPCFDSGFVFFN 357
TEC + FL+C +S+ + ++G+PC D + FFN
Sbjct: 299 TECKN-FLICKNETSQGMAYNYAKYIGLPCTDKNYPFFN 336


>sp|Q83207|UL33_MCMVS G-protein coupled receptor homolog M33
OS=Murine cytomegalovirus (strain Smith) PE=3 SV=1
Length = 377

Score = 30.0 bits (66), Expect = 9.8
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +3

Query: 18 FLIGSHNGIAMVSWTGCGPALSNLQALCTARFPSIALVCGNRLR 149
FLI S+ G S GC A CTA F ++AL+ NR R
Sbjct: 90 FLILSNRGQISSSPEGCKLVAVTYYASCTAGFSTLALISVNRYR 133


tr_hit_id Q8VAG6
Definition tr|Q8VAG6|Q8VAG6_WSSV Wsv450 (WSSV510) OS=White spot syndrome virus
Align length 51
Score (bit) 34.7
E-value 4.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK956899|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0026_P06, 5'
(614 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q8VAG6|Q8VAG6_WSSV Wsv450 (WSSV510) OS=White spot syndrome vi... 35 4.5

>tr|Q8VAG6|Q8VAG6_WSSV Wsv450 (WSSV510) OS=White spot syndrome virus
PE=4 SV=1
Length = 157

Score = 34.7 bits (78), Expect = 4.5
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +2

Query: 236 ILLTILQNVLTFSCCVLLAAQNFCPLS*GCPVLIAGLFSLIRLVSFWLEIL 388
I+L++L+ + +FSC L A +S GCP S+ L+SF EIL
Sbjct: 78 IILSVLEEIASFSCLALELAMRRSHISLGCPCSFVINSSIFFLLSFPFEIL 128