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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK956921
Clone id TST39A01NGRL0027_A04
Library
Length 627
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0027_A04. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GGAAGAGGAAGCAAATCGAGGCAATGGCCACAGCTACTTCTGCATTGAGTAGCTCTACCT
TTGCAGGGCAGACCGCTCTGAAGCCTCAGAACGAGCTGTCCAAGAGGGTGGGCAATGTGG
AGGCTCGGGTGAGCATGAGGAGGACCGTGAAGAGCACTCCAGAGAGCATCTGGTATGGTC
CAGATCGCCCTAAGTACCTGGGCCCCTTCTCCGAGGCCACTCCCTCTTACCTGACCGGTG
AGTTCCCCGGTGATTACGGCTGGGACACCGCCGGCCTGTCTGCCGACCCCGAGACCTTCG
CGAAGAACCGCGAGCTGGAGGTCATTCATGCCAGGTGGGCAATGTTGGGCGCCCTCGGGT
GTGTGACCCCTGAGCTGTTGGCTAAGAACGGCGTGAAGTTTGGTGAGGCAGTGTGGTTCA
AGGCTGGCTCTCAAATCTTCGCTGACGGAGGGTTGGACTACTTGGGCAACCCCAGCTTGG
TGCACGCTCAGAGCATTTTGGCCATCTGGGCATGTCAGGTTGTGCTGATGGGCGCTGTTG
AGGGTTACAGAGTTGGCGGCGGCCCCCTCGGCGAGGGCCTGGACCCCATCTACCCCGGTG
GTTCCTTCGACCCCCTTGGCCTTGCTG
■■Homology search results ■■ -
sp_hit_id P12332
Definition sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis
Align length 189
Score (bit) 359.0
E-value 5.0e-99
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956921|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0027_A04, 5'
         (612 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas...   359   5e-99
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...   346   6e-95
sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chl...   342   9e-94
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...   341   2e-93
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...   340   3e-93
sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chlorop...   340   3e-93
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop...   338   2e-92
sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chlorop...   336   5e-92
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas...   331   2e-90
sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas...   331   2e-90
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...   329   8e-90
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...   325   1e-88
sp|P14279|CB25_SOLLC Chlorophyll a-b binding protein 5, chloropl...   318   2e-86
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   310   4e-84
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   309   6e-84
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...   307   3e-83
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...   307   3e-83
sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas...   306   7e-83
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...   306   7e-83
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   305   1e-82
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop...   304   3e-82
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro...   303   3e-82
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...   303   3e-82
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...   303   5e-82
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl...   303   6e-82
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...   303   6e-82
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   303   6e-82
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop...   302   8e-82
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb...   302   1e-81
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro...   302   1e-81

>sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic
           (Fragment) OS=Silene pratensis PE=2 SV=2
          Length = 205

 Score =  359 bits (922), Expect = 5e-99
 Identities = 170/189 (89%), Positives = 177/189 (93%)
 Frame = +3

Query: 45  FAGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 224
           FAGQT LKPQNEL ++VG    RVSMRRT+KS PESIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 11  FAGQTLLKPQNELVRKVGGNGGRVSMRRTIKSAPESIWYGPDRPKYLGPFSEQTPSYLTG 70

Query: 225 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 404
           EFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLAKNGVKFGEAVWF
Sbjct: 71  EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFGEAVWF 130

Query: 405 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPG 584
           KAGSQIF +GGLDYLGNP+LVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLD +YPG
Sbjct: 131 KAGSQIFQEGGLDYLGNPNLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDQLYPG 190

Query: 585 GSFDPLGLA 611
           G+FDPLGLA
Sbjct: 191 GAFDPLGLA 199


>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151,
           chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2
          Length = 265

 Score =  346 bits (887), Expect = 6e-95
 Identities = 165/190 (86%), Positives = 175/190 (92%), Gaps = 1/190 (0%)
 Frame = +3

Query: 45  FAGQTALKPQNELSKRVGNVEA-RVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 221
           FAGQTALK  NEL  ++G V   RVSMRRTVKS P SIWYGPDRPKYLGPFS+  PSYLT
Sbjct: 11  FAGQTALKQSNELVCKIGAVGGGRVSMRRTVKSAPTSIWYGPDRPKYLGPFSDQIPSYLT 70

Query: 222 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 401
           GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVW
Sbjct: 71  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVW 130

Query: 402 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 581
           FKAGSQIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYRVGGGPLGEGLDPIYP
Sbjct: 131 FKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYP 190

Query: 582 GGSFDPLGLA 611
           GG+FDPLGLA
Sbjct: 191 GGAFDPLGLA 200


>sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I,
           chloroplastic OS=Pinus thunbergii PE=2 SV=1
          Length = 266

 Score =  342 bits (877), Expect = 9e-94
 Identities = 159/189 (84%), Positives = 175/189 (92%), Gaps = 1/189 (0%)
 Frame = +3

Query: 48  AGQTALKPQ-NELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 224
           AGQT L+PQ NEL K+VG  +AR++MRRTV+S PESIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 13  AGQTLLRPQQNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGPFSEGTPSYLTG 72

Query: 225 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 404
           EFPGDYGWDTA +SADPETFAKNRELEVIH RWAMLGALGCV PELLAKNG+KFGEAVWF
Sbjct: 73  EFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVWF 132

Query: 405 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPG 584
           KAG+QIF++GGLDY GNP+L+HAQSILAIWACQVVLMG +EGYRVGGG LGEGLDP+ PG
Sbjct: 133 KAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGTLGEGLDPLLPG 192

Query: 585 GSFDPLGLA 611
           G+FDPLGLA
Sbjct: 193 GAFDPLGLA 201


>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type
           I, chloroplastic OS=Lemna gibba PE=3 SV=1
          Length = 264

 Score =  341 bits (874), Expect = 2e-93
 Identities = 158/189 (83%), Positives = 177/189 (93%)
 Frame = +3

Query: 45  FAGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 224
           FAGQTALK ++EL ++VG  + R SMRRTVK+ P+SIWYG DRPK+LGPFSE TPSYLTG
Sbjct: 11  FAGQTALKQRDELVRKVGVSDGRFSMRRTVKAVPQSIWYGADRPKFLGPFSEQTPSYLTG 70

Query: 225 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 404
           EFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGC+ PELL+KNGV+FGEAVWF
Sbjct: 71  EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWF 130

Query: 405 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPG 584
           KAG+QIF++GGLDYLGNP+LVHAQSILAIWA QVVLMG +EGYRVGGGPLGEGLDP+YPG
Sbjct: 131 KAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGGGPLGEGLDPLYPG 190

Query: 585 GSFDPLGLA 611
           G+FDPLGLA
Sbjct: 191 GAFDPLGLA 199


>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4,
           chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1
          Length = 265

 Score =  340 bits (873), Expect = 3e-93
 Identities = 161/190 (84%), Positives = 173/190 (91%), Gaps = 1/190 (0%)
 Frame = +3

Query: 45  FAGQTALKPQNELSKRVGNV-EARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 221
           F GQ   K QNE  ++VGN  E R++MRRTVKS P+SIWYG DRPKYLGPFSE TPSYLT
Sbjct: 11  FVGQAVGKSQNEFIRKVGNFGEGRITMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLT 70

Query: 222 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 401
           GEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVW
Sbjct: 71  GEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVW 130

Query: 402 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 581
           FKAGSQIF++GGLDYLGNP+LVHAQSILAIWACQVVLMG VEGYRVGGGPLGEGLD IYP
Sbjct: 131 FKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYP 190

Query: 582 GGSFDPLGLA 611
           GG+FDPLGLA
Sbjct: 191 GGAFDPLGLA 200


>sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36,
           chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1
          Length = 265

 Score =  340 bits (872), Expect = 3e-93
 Identities = 159/190 (83%), Positives = 175/190 (92%), Gaps = 1/190 (0%)
 Frame = +3

Query: 45  FAGQTALKPQNELSKRVGNVEA-RVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 221
           FAGQTALK QNEL +++G+    R +MRRTVKS P+SIWYG DRPKYLGPFSE TPSYLT
Sbjct: 11  FAGQTALKSQNELVRKIGSFNGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLT 70

Query: 222 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 401
           GEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVW
Sbjct: 71  GEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVW 130

Query: 402 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 581
           FKAGSQIF++GGLDYLGNP+L+HAQSILA+WA QVVLMG +EGYRVGGGPLGEGLD IYP
Sbjct: 131 FKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRVGGGPLGEGLDKIYP 190

Query: 582 GGSFDPLGLA 611
           GG+FDPLGLA
Sbjct: 191 GGAFDPLGLA 200


>sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37,
           chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1
          Length = 265

 Score =  338 bits (866), Expect = 2e-92
 Identities = 160/190 (84%), Positives = 174/190 (91%), Gaps = 1/190 (0%)
 Frame = +3

Query: 45  FAGQTALKPQNELSKRVGNVEA-RVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 221
           FAGQTALK QNEL +++G+    R +MRRTVKS P+SIWYG DRPKYLGPFSE TPSYLT
Sbjct: 11  FAGQTALKSQNELVRKIGSFGGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLT 70

Query: 222 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 401
           GEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCV PE+L+KNGV FGEAVW
Sbjct: 71  GEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVW 130

Query: 402 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 581
           FKAGSQIF++GGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYRVGGGPLGEGLD IYP
Sbjct: 131 FKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGPLGEGLDKIYP 190

Query: 582 GGSFDPLGLA 611
           GG+FDPLGLA
Sbjct: 191 GGAFDPLGLA 200


>sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215,
           chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1
          Length = 265

 Score =  336 bits (862), Expect = 5e-92
 Identities = 159/190 (83%), Positives = 172/190 (90%), Gaps = 1/190 (0%)
 Frame = +3

Query: 45  FAGQTALKPQNELSKRVGNV-EARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 221
           F G+T L+  NE  ++ GN  +AR +MRRTVKS PESIWYGPDRPKYLGPFSE  PSYLT
Sbjct: 11  FTGKTGLRQGNEFIRKRGNFGQARFTMRRTVKSAPESIWYGPDRPKYLGPFSEQIPSYLT 70

Query: 222 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 401
           GEFPGDYGWDTAGLSADPETFA+NRELEVIH+RWAMLGALGC  PELL KNGVKFGEAVW
Sbjct: 71  GEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVW 130

Query: 402 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 581
           FKAGSQIFA+GGLDYLGNP+L+HAQSILAIWA QVVLMG VEGYRVGGGPLGEGLDP+YP
Sbjct: 131 FKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVGGGPLGEGLDPLYP 190

Query: 582 GGSFDPLGLA 611
           GG+FDPLGLA
Sbjct: 191 GGAFDPLGLA 200


>sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplastic
           OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1
          Length = 263

 Score =  331 bits (848), Expect = 2e-90
 Identities = 153/180 (85%), Positives = 170/180 (94%)
 Frame = +3

Query: 72  QNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFPGDYGWD 251
           ++EL +RVG+   R++MRRTVKS P+SIWYGPDRPKYLGPFSE TPSYLTGEFPGDYGWD
Sbjct: 19  RDELVRRVGDSGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 78

Query: 252 TAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAD 431
           TAGLSADPETFA+NRELEVIH+RWAMLGALGCV PE+L+KNGVKFGEAVWFKAG+QIF++
Sbjct: 79  TAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSE 138

Query: 432 GGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPGGSFDPLGLA 611
           GGLDYLGNP+LVHAQSILAIWA QVVLMG VEGYRVGGGPLGEGLD +YPGG+FDPLGLA
Sbjct: 139 GGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLA 198



 Score = 30.8 bits (68), Expect = 5.7
 Identities = 20/64 (31%), Positives = 30/64 (46%)
 Frame = +3

Query: 186 GPFSEATPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELL 365
           GP  E     L   +PG   +D  GL+ DP+TFA+ +  E+ + R AM    G     ++
Sbjct: 177 GPLGEG----LDKVYPGG-AFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIV 231

Query: 366 AKNG 377
              G
Sbjct: 232 TGKG 235


>sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplastic
           OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1
          Length = 263

 Score =  331 bits (848), Expect = 2e-90
 Identities = 153/180 (85%), Positives = 170/180 (94%)
 Frame = +3

Query: 72  QNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGEFPGDYGWD 251
           ++EL +RVG+   R++MRRTVKS P+SIWYGPDRPKYLGPFSE TPSYLTGEFPGDYGWD
Sbjct: 19  RDELVRRVGDSGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWD 78

Query: 252 TAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAD 431
           TAGLSADPETFA+NRELEVIH+RWAMLGALGCV PE+L+KNGVKFGEAVWFKAG+QIF++
Sbjct: 79  TAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSE 138

Query: 432 GGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPGGSFDPLGLA 611
           GGLDYLGNP+LVHAQSILAIWA QVVLMG VEGYRVGGGPLGEGLD +YPGG+FDPLGLA
Sbjct: 139 GGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLA 198



 Score = 30.8 bits (68), Expect = 5.7
 Identities = 20/64 (31%), Positives = 30/64 (46%)
 Frame = +3

Query: 186 GPFSEATPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELL 365
           GP  E     L   +PG   +D  GL+ DP+TFA+ +  E+ + R AM    G     ++
Sbjct: 177 GPLGEG----LDKVYPGG-AFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIV 231

Query: 366 AKNG 377
              G
Sbjct: 232 TGKG 235
tr_hit_id Q00984
Definition tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus thunbergii
Align length 189
Score (bit) 353.0
E-value 3.0e-96
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956921|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0027_A04, 5'
         (612 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus ...   353   3e-96
tr|Q1EP00|Q1EP00_MUSAC Chlorophyll A-B binding protein (CAB), pu...   350   3e-95
tr|Q3LFQ5|Q3LFQ5_PANGI Chlorophyll a/b binding protein OS=Panax ...   350   5e-95
tr|Q19UF9|Q19UF9_9MAGN Chloroplast chlorophyll a/b binding prote...   349   6e-95
tr|A5ASG6|A5ASG6_VITVI Putative uncharacterized protein (Chromos...   348   1e-94
tr|Q38713|Q38713_AMAHP Chlorophyll a/b binding protein OS=Amaran...   347   2e-94
tr|O49812|O49812_BETVU Chlorophyll a/b-binding protein OS=Beta v...   347   3e-94
tr|A9NLB8|A9NLB8_PICSI Putative uncharacterized protein OS=Picea...   347   3e-94
tr|A9NMJ8|A9NMJ8_PICSI Putative uncharacterized protein OS=Picea...   347   4e-94
tr|Q9SWE9|Q9SWE9_9CARY Chlorophyll a/b binding protein OS=Rumex ...   346   5e-94
tr|O82425|O82425_PRUPE Light harvesting chlorophyll A/B binding ...   346   7e-94
tr|Q9XF87|Q9XF87_ARATH Lhcb2 protein (At3g27700) (Light harvesti...   345   9e-94
tr|Q40956|Q40956_PINPA Type 2 light-harvesting chlorophyll a/b-b...   345   9e-94
tr|B2BAK8|B2BAK8_LILLO Chlorophyll a/b binding protein of LHCII ...   345   9e-94
tr|A9NPD6|A9NPD6_PICSI Putative uncharacterized protein OS=Picea...   345   9e-94
tr|Q9XF86|Q9XF86_ARATH Lhcb2 protein OS=Arabidopsis thaliana GN=...   345   2e-93
tr|Q9SYW9|Q9SYW9_ARATH Lhcb2 protein OS=Arabidopsis thaliana GN=...   345   2e-93
tr|Q9SHR7|Q9SHR7_ARATH Putative chlorophyll a/b binding protein ...   345   2e-93
tr|A9NP21|A9NP21_PICSI Putative uncharacterized protein OS=Picea...   345   2e-93
tr|A9NL12|A9NL12_PICSI Putative uncharacterized protein OS=Picea...   345   2e-93
tr|B8LPT5|B8LPT5_PICSI Putative uncharacterized protein OS=Picea...   344   2e-93
tr|A9PJH7|A9PJH7_POPJC Putative uncharacterized protein OS=Popul...   343   5e-93
tr|A9PFW7|A9PFW7_POPTR Putative uncharacterized protein OS=Popul...   343   5e-93
tr|A9NLD5|A9NLD5_PICSI Putative uncharacterized protein OS=Picea...   342   1e-92
tr|Q9S7J7|Q9S7J7_ARATH Putative chlorophyll a/b binding protein ...   341   2e-92
tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella paten...   341   2e-92
tr|Q93YG3|Q93YG3_SOYBN Chlorophyll a/b binding protein type II O...   339   8e-92
tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella paten...   338   1e-91
tr|Q84TM7|Q84TM7_TOBAC Chlorophyll a/b binding protein OS=Nicoti...   338   2e-91
tr|Q41449|Q41449_SOLTU Chlorophyll a,b binding protein type I OS...   337   2e-91

>tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus
           thunbergii GN=cab PE=4 SV=1
          Length = 266

 Score =  353 bits (907), Expect = 3e-96
 Identities = 164/189 (86%), Positives = 179/189 (94%), Gaps = 1/189 (0%)
 Frame = +3

Query: 48  AGQTALKPQ-NELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 224
           AGQT L+PQ NEL K+VG  +AR++MRRTV+S PESIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 13  AGQTLLRPQQNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGPFSEGTPSYLTG 72

Query: 225 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 404
           EFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGC+ PELLAKNGVKFGEAVWF
Sbjct: 73  EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCLFPELLAKNGVKFGEAVWF 132

Query: 405 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPG 584
           KAG+QIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYRVGGGPLGEGLDP+YPG
Sbjct: 133 KAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDPLYPG 192

Query: 585 GSFDPLGLA 611
           G+FDPLGLA
Sbjct: 193 GAFDPLGLA 201


>tr|Q1EP00|Q1EP00_MUSAC Chlorophyll A-B binding protein (CAB),
           putative OS=Musa acuminata GN=MA4_112I10.40 PE=4 SV=1
          Length = 264

 Score =  350 bits (899), Expect = 3e-95
 Identities = 165/189 (87%), Positives = 175/189 (92%)
 Frame = +3

Query: 45  FAGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 224
           FAGQTALK QNEL +RVG+   R  MRRT  STP+SIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 11  FAGQTALKQQNELVRRVGSSRGRFFMRRTTASTPKSIWYGPDRPKYLGPFSEQTPSYLTG 70

Query: 225 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 404
           EFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE+LAKNGVKFGEAVWF
Sbjct: 71  EFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPEILAKNGVKFGEAVWF 130

Query: 405 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPG 584
           KAG+QIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG VEGYRVGGGPLGEGLD IYPG
Sbjct: 131 KAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDAIYPG 190

Query: 585 GSFDPLGLA 611
           G+FDPLGLA
Sbjct: 191 GAFDPLGLA 199


>tr|Q3LFQ5|Q3LFQ5_PANGI Chlorophyll a/b binding protein OS=Panax
           ginseng GN=cab PE=2 SV=1
          Length = 265

 Score =  350 bits (897), Expect = 5e-95
 Identities = 165/190 (86%), Positives = 180/190 (94%), Gaps = 1/190 (0%)
 Frame = +3

Query: 45  FAGQTALKPQNELSKRVGNVEA-RVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 221
           FAGQTALKPQNEL +++G++   R++MRRTV+S PESIWYGPDRPKYLGPFSE TPSYLT
Sbjct: 11  FAGQTALKPQNELVRKIGSLGGGRITMRRTVRSAPESIWYGPDRPKYLGPFSEQTPSYLT 70

Query: 222 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 401
           GEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PE+LA+NGVKFGEAVW
Sbjct: 71  GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILARNGVKFGEAVW 130

Query: 402 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 581
           FKAG+QIF++GGLDYLGNP+LVHAQSILAIWA QVVLMG VEGYRVGGGPLGEGLD IYP
Sbjct: 131 FKAGAQIFSEGGLDYLGNPNLVHAQSILAIWASQVVLMGFVEGYRVGGGPLGEGLDKIYP 190

Query: 582 GGSFDPLGLA 611
           GGSFDPLGLA
Sbjct: 191 GGSFDPLGLA 200


>tr|Q19UF9|Q19UF9_9MAGN Chloroplast chlorophyll a/b binding protein
           OS=Pachysandra terminalis PE=2 SV=1
          Length = 264

 Score =  349 bits (896), Expect = 6e-95
 Identities = 163/188 (86%), Positives = 176/188 (93%)
 Frame = +3

Query: 48  AGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGE 227
           AG+TALK QNEL K+VG    R+SM RTVKSTP+SIWYGPDRPKYLGPFSE TPSYLTGE
Sbjct: 12  AGRTALKQQNELVKKVGVFGGRISMHRTVKSTPQSIWYGPDRPKYLGPFSEQTPSYLTGE 71

Query: 228 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 407
           FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVWFK
Sbjct: 72  FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFK 131

Query: 408 AGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPGG 587
           AG+QIF++GGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYRVGGGPLGEGLD IYPGG
Sbjct: 132 AGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFIEGYRVGGGPLGEGLDSIYPGG 191

Query: 588 SFDPLGLA 611
           +FDPLGLA
Sbjct: 192 AFDPLGLA 199


>tr|A5ASG6|A5ASG6_VITVI Putative uncharacterized protein (Chromosome
           chr12 scaffold_47, whole genome shotgun sequence)
           OS=Vitis vinifera GN=GSVIVT00029136001 PE=4 SV=1
          Length = 265

 Score =  348 bits (894), Expect = 1e-94
 Identities = 165/190 (86%), Positives = 178/190 (93%), Gaps = 1/190 (0%)
 Frame = +3

Query: 45  FAGQTALKPQNELSKRVGNVEA-RVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLT 221
           FAGQTALK  NEL ++VG +   R++MRRTVKSTP+SIWYGPDRPKYLGPFSE TPSYLT
Sbjct: 11  FAGQTALKQPNELVRKVGGLGGGRITMRRTVKSTPQSIWYGPDRPKYLGPFSEQTPSYLT 70

Query: 222 GEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVW 401
           GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE+L+KNGVKFGEAVW
Sbjct: 71  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVW 130

Query: 402 FKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYP 581
           FKAG+QIF++GGLDYLGNP+LVHAQSILAIWACQVVLMG VEGYRVGGGPLGEGLD IYP
Sbjct: 131 FKAGAQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDAIYP 190

Query: 582 GGSFDPLGLA 611
           GG+FDPLGLA
Sbjct: 191 GGAFDPLGLA 200


>tr|Q38713|Q38713_AMAHP Chlorophyll a/b binding protein
           OS=Amaranthus hypochondriacus GN=Lhcb2*Ah1 PE=4 SV=1
          Length = 264

 Score =  347 bits (891), Expect = 2e-94
 Identities = 162/189 (85%), Positives = 174/189 (92%)
 Frame = +3

Query: 45  FAGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 224
           F GQT LK QNEL ++VG    R SMRRTVKS P+SIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 11  FVGQTLLKQQNELVRKVGGNGGRFSMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTG 70

Query: 225 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 404
           EFPGDYGWDTAGLSADPETFA+NRELEVIH+RWAMLGALGCV PE+L+KNGVKFGEAVWF
Sbjct: 71  EFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWF 130

Query: 405 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPG 584
           KAGSQIF +GGLDYLGNP+L+HAQSILAIWACQVVLMG +EGYRVGGGPLGEGLD IYPG
Sbjct: 131 KAGSQIFQEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDKIYPG 190

Query: 585 GSFDPLGLA 611
           G+FDPLGLA
Sbjct: 191 GAFDPLGLA 199


>tr|O49812|O49812_BETVU Chlorophyll a/b-binding protein OS=Beta
           vulgaris subsp. vulgaris PE=2 SV=1
          Length = 264

 Score =  347 bits (890), Expect = 3e-94
 Identities = 162/189 (85%), Positives = 174/189 (92%)
 Frame = +3

Query: 45  FAGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 224
           FAGQT LKPQNEL ++ G    R SMRRTVKS P+SIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 11  FAGQTILKPQNELVRKFGGNGGRASMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTG 70

Query: 225 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 404
           EFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PE+L+KNGVKFGEAVWF
Sbjct: 71  EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWF 130

Query: 405 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPG 584
           KAGSQIF +GGLDYLGNP+L+HAQSILAIWA QVVLMG +EGYRVGGGPLGEGLD +YPG
Sbjct: 131 KAGSQIFQEGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYRVGGGPLGEGLDKLYPG 190

Query: 585 GSFDPLGLA 611
           G+FDPLGLA
Sbjct: 191 GAFDPLGLA 199


>tr|A9NLB8|A9NLB8_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 266

 Score =  347 bits (890), Expect = 3e-94
 Identities = 163/189 (86%), Positives = 178/189 (94%), Gaps = 1/189 (0%)
 Frame = +3

Query: 48  AGQTALKP-QNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 224
           AGQT L+P QNEL K+VG  +AR++MRRTV+S PESIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 13  AGQTLLRPHQNELVKKVGASQARITMRRTVRSAPESIWYGPDRPKYLGPFSEQTPSYLTG 72

Query: 225 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 404
           EFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCV PELLAK GVKFGEAVWF
Sbjct: 73  EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAKTGVKFGEAVWF 132

Query: 405 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPG 584
           KAG+QIF++GGLDYLGNP+L+HAQSILAIWA QVVLMG +EGYRVGGGPLGEGLDP+YPG
Sbjct: 133 KAGAQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYRVGGGPLGEGLDPLYPG 192

Query: 585 GSFDPLGLA 611
           G+FDPLGLA
Sbjct: 193 GAFDPLGLA 201


>tr|A9NMJ8|A9NMJ8_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 266

 Score =  347 bits (889), Expect = 4e-94
 Identities = 163/189 (86%), Positives = 177/189 (93%), Gaps = 1/189 (0%)
 Frame = +3

Query: 48  AGQTALKP-QNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTG 224
           AGQT L+P QNEL K+VG  +AR++MRRTV+S PESIWYGPDRPKYLGPFSE TPSYLTG
Sbjct: 13  AGQTLLRPHQNELVKKVGASQARITMRRTVRSAPESIWYGPDRPKYLGPFSEQTPSYLTG 72

Query: 225 EFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWF 404
           EFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLAK GVKFGEAVWF
Sbjct: 73  EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKTGVKFGEAVWF 132

Query: 405 KAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPG 584
           KAG+QIF++GGLDYLGNP+L+HAQSILAIWA QVVLMG +EGYRVGGGPLGEGLDP+YPG
Sbjct: 133 KAGAQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYRVGGGPLGEGLDPLYPG 192

Query: 585 GSFDPLGLA 611
           G+FDPLGLA
Sbjct: 193 GAFDPLGLA 201


>tr|Q9SWE9|Q9SWE9_9CARY Chlorophyll a/b binding protein OS=Rumex
           palustris GN=CAB1 PE=2 SV=1
          Length = 264

 Score =  346 bits (888), Expect = 5e-94
 Identities = 163/188 (86%), Positives = 175/188 (93%)
 Frame = +3

Query: 48  AGQTALKPQNELSKRVGNVEARVSMRRTVKSTPESIWYGPDRPKYLGPFSEATPSYLTGE 227
           AGQTALKPQNEL ++VG    R  MRRTVKS P+SIWYGPDRPKYLGPFSE TPSYLTGE
Sbjct: 12  AGQTALKPQNELVRKVGGNGGRFFMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGE 71

Query: 228 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVKFGEAVWFK 407
           FPGDYGWDTAGLSADPETFA+NRELEVIH+RWAMLGALGCV PELL+KNGV+FGEAVWFK
Sbjct: 72  FPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLSKNGVQFGEAVWFK 131

Query: 408 AGSQIFADGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDPIYPGG 587
           AGSQIF++GGLDYLGNP+LVHAQSILAIWACQVVLMG VEGYRVGGGPLGE LD +YPGG
Sbjct: 132 AGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEDLDKLYPGG 191

Query: 588 SFDPLGLA 611
           +FDPLGLA
Sbjct: 192 AFDPLGLA 199