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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK956926
Clone id TST39A01NGRL0027_A09
Library
Length 664
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0027_A09. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CTCGGCACGAAGAATTGCGATTTTCAGATGGAGCGTTACGTGTGGAAGCGTCGATCTGAC
GGAATTTTTATCATCAATGTAGGAAAAACATGGGACAAGCTGGAGTTGGCAGCGAGAGTG
ATTGTCGCTATTGAAAATCCTCAGGATATTATTGTTCAATCTGCCAGGCCCTATGGTCAG
AGGGCAGTATTAAAATTCGCTCAATACACTGGTGCTCAGGCGATTGCTGGACGTCACACT
CCAGGAACGTTTACCAATCAGCTTCAGAACACGTTTTGTGAGCCTCGGCTCTTGATTTTG
ACAGACCCACGTACTGATCATCAGCCTATCAAAGAGGCTGCGCTTGGAAACATCCCTATT
ATTGCATTTTGTGACACAGATTCCCCCATGCGCCATGTGGACATTGGTATCCCTGCTAAT
AACAAGGGGAAGCACAGTATCGGTTGTCTTTTTTGGATGCTAGCTCGCATGGTTCTCCAG
ATGAGGGGAACTATTTCTCCACGCCAGCCGTGGGATGTCATGGTGGATCTGTTCTTCTAT
CGTGAGCCAGAGGAAGCCAAGGAGCGTGAGGAGGAGGAAGGTGCTGCACCAGAATTTGCA
CCTACAGAGTATAATGCGCCTCCTACAATTGCTGCCGTCGCAGCAGCTCCTGACCAATGG
GGTG
■■Homology search results ■■ -
sp_hit_id O22518
Definition sp|O22518|RSSA_SOYBN 40S ribosomal protein SA OS=Glycine max
Align length 181
Score (bit) 341.0
E-value 2.0e-93
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956926|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0027_A09, 5'
         (664 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O22518|RSSA_SOYBN 40S ribosomal protein SA OS=Glycine max PE=...   341   2e-93
sp|Q9ZSR8|RSSA_BRANA 40S ribosomal protein SA OS=Brassica napus ...   336   6e-92
sp|O80377|RSSA_DAUCA 40S ribosomal protein SA OS=Daucus carota G...   335   1e-91
sp|Q08682|RSSA1_ARATH 40S ribosomal protein Sa-1 OS=Arabidopsis ...   335   1e-91
sp|O65751|RSSA_CICAR 40S ribosomal protein SA OS=Cicer arietinum...   335   2e-91
sp|Q8H173|RSSA2_ARATH 40S ribosomal protein Sa-2 OS=Arabidopsis ...   329   7e-90
sp|P38981|RSSA_URECA 40S ribosomal protein SA OS=Urechis caupo P...   261   2e-69
sp|Q01291|RS0_NEUCR 40S ribosomal protein S0 OS=Neurospora crass...   258   3e-68
sp|P50890|RSSA_CHICK 40S ribosomal protein SA OS=Gallus gallus G...   256   6e-68
sp|A6YRY8|RSSA_SHEEP 40S ribosomal protein SA OS=Ovis aries GN=R...   256   1e-67
sp|P38983|RSSA_RAT 40S ribosomal protein SA OS=Rattus norvegicus...   256   1e-67
sp|Q4GWZ2|RSSA_PIG 40S ribosomal protein SA OS=Sus scrofa GN=RPS...   256   1e-67
sp|P14206|RSSA_MOUSE 40S ribosomal protein SA OS=Mus musculus GN...   256   1e-67
sp|P08865|RSSA_HUMAN 40S ribosomal protein SA OS=Homo sapiens GN...   256   1e-67
sp|Q2L9X0|RSSA_CERAE 40S ribosomal protein SA OS=Cercopithecus a...   256   1e-67
sp|P26452|RSSA_BOVIN 40S ribosomal protein SA OS=Bos taurus GN=R...   256   1e-67
sp|P38979|RSSA_DROME 40S ribosomal protein SA OS=Drosophila mela...   254   2e-67
sp|P38982|RSSA_CRIGR 40S ribosomal protein SA OS=Cricetulus gris...   253   5e-67
sp|P38980|RSSA_TRIGR 40S ribosomal protein SA OS=Tripneustes gra...   248   2e-65
sp|Q9Y7L8|RS0A_SCHPO 40S ribosomal protein S0-A OS=Schizosacchar...   246   1e-64
sp|Q9P546|RS0B_SCHPO 40S ribosomal protein S0-B OS=Schizosacchar...   243   9e-64
sp|Q01661|RS0_PNECA 40S ribosomal protein S0 OS=Pneumocystis car...   239   7e-63
sp|P38984|RSSA_CHLVR 40S ribosomal protein SA OS=Chlorohydra vir...   231   3e-60
sp|Q55BY1|RSSA_DICDI 40S ribosomal protein SA OS=Dictyostelium d...   230   4e-60
sp|P46654|RS0B_YEAST 40S ribosomal protein S0-B OS=Saccharomyces...   223   7e-58
sp|P32905|RS0A_YEAST 40S ribosomal protein S0-A OS=Saccharomyces...   222   1e-57
sp|P46769|RSSA_CAEEL Probable 40S ribosomal protein SA OS=Caenor...   221   2e-57
sp|O42817|RS0_CANAL 40S ribosomal protein S0 OS=Candida albicans...   216   1e-55
sp|P46770|RSSA_ECHGR 40S ribosomal protein SA OS=Echinococcus gr...   200   5e-51
sp|P46771|RSSA_STRPU 40S ribosomal protein SA (Fragment) OS=Stro...   185   2e-46

>sp|O22518|RSSA_SOYBN 40S ribosomal protein SA OS=Glycine max PE=2
           SV=1
          Length = 310

 Score =  341 bits (875), Expect = 2e-93
 Identities = 163/181 (90%), Positives = 173/181 (95%)
 Frame = +1

Query: 1   LGTKNCDFQMERYVWKRRSDGIFIINVGKTWDKLELAARVIVAIENPQDIIVQSARPYGQ 180
           LGTKNCDFQMERY++KRR+DGI+IIN+GKTW+KL+LAARVIVAIENPQDIIVQSARPYGQ
Sbjct: 32  LGTKNCDFQMERYIFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQ 91

Query: 181 RAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRLLILTDPRTDHQPIKEAALGNIPI 360
           RAVLKFAQYTGA AIAGRHTPGTFTNQLQ +F EPRLLILTDPRTDHQPIKEAALGNIP 
Sbjct: 92  RAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDHQPIKEAALGNIPT 151

Query: 361 IAFCDTDSPMRHVDIGIPANNKGKHSIGCLFWMLARMVLQMRGTISPRQPWDVMVDLFFY 540
           IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFW+LARMVLQMRGTI P   WDVMVDLFFY
Sbjct: 152 IAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGLKWDVMVDLFFY 211

Query: 541 R 543
           R
Sbjct: 212 R 212


>sp|Q9ZSR8|RSSA_BRANA 40S ribosomal protein SA OS=Brassica napus
           GN=LRP PE=2 SV=1
          Length = 292

 Score =  336 bits (862), Expect = 6e-92
 Identities = 160/181 (88%), Positives = 171/181 (94%)
 Frame = +1

Query: 1   LGTKNCDFQMERYVWKRRSDGIFIINVGKTWDKLELAARVIVAIENPQDIIVQSARPYGQ 180
           LGTKNC++QMERYV+KRR+DGI+I N+GKTW+KL +AARVIVAIENPQDIIVQSARPYGQ
Sbjct: 26  LGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLMMAARVIVAIENPQDIIVQSARPYGQ 85

Query: 181 RAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRLLILTDPRTDHQPIKEAALGNIPI 360
           RAVLKFAQYTGA AIAGRHTPGTFTNQ+Q +F EPRLLILTDPRTDHQPIKE ALGNIPI
Sbjct: 86  RAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSEPRLLILTDPRTDHQPIKEGALGNIPI 145

Query: 361 IAFCDTDSPMRHVDIGIPANNKGKHSIGCLFWMLARMVLQMRGTISPRQPWDVMVDLFFY 540
           IAFCDTDSPMR VDIGIPANNKGKHSIGCLFW+LARMVLQMRGTI P Q WDVMVDLFFY
Sbjct: 146 IAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPAQKWDVMVDLFFY 205

Query: 541 R 543
           R
Sbjct: 206 R 206


>sp|O80377|RSSA_DAUCA 40S ribosomal protein SA OS=Daucus carota
           GN=179B PE=2 SV=1
          Length = 297

 Score =  335 bits (859), Expect = 1e-91
 Identities = 161/181 (88%), Positives = 171/181 (94%)
 Frame = +1

Query: 1   LGTKNCDFQMERYVWKRRSDGIFIINVGKTWDKLELAARVIVAIENPQDIIVQSARPYGQ 180
           LGTKNCDFQMERYV+KRR+DGI+IIN+GKTW+KL LAARVIV+IENPQDIIVQSARPYGQ
Sbjct: 25  LGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLMLAARVIVSIENPQDIIVQSARPYGQ 84

Query: 181 RAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRLLILTDPRTDHQPIKEAALGNIPI 360
           RAVLKFAQYTGA AIAGRHTPGTFTNQLQ +F EPRLLILTDPRTDHQPIKEAALGNIP 
Sbjct: 85  RAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDHQPIKEAALGNIPT 144

Query: 361 IAFCDTDSPMRHVDIGIPANNKGKHSIGCLFWMLARMVLQMRGTISPRQPWDVMVDLFFY 540
           IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFW+LARMVLQMRG IS    W+VMVDLFFY
Sbjct: 145 IAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGVISQGHKWEVMVDLFFY 204

Query: 541 R 543
           R
Sbjct: 205 R 205


>sp|Q08682|RSSA1_ARATH 40S ribosomal protein Sa-1 OS=Arabidopsis
           thaliana GN=RPSaA PE=1 SV=3
          Length = 298

 Score =  335 bits (859), Expect = 1e-91
 Identities = 159/181 (87%), Positives = 172/181 (95%)
 Frame = +1

Query: 1   LGTKNCDFQMERYVWKRRSDGIFIINVGKTWDKLELAARVIVAIENPQDIIVQSARPYGQ 180
           LGTKNC++QMERYV+KRR+DGI+I N+GKTW+KL++AARVIVAIENPQDIIVQSARPYGQ
Sbjct: 29  LGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQ 88

Query: 181 RAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRLLILTDPRTDHQPIKEAALGNIPI 360
           RAVLKFAQYTGA AIAGRHTPGTFTNQ+Q +F EPRLLILTDPRTDHQPIKE ALGNIPI
Sbjct: 89  RAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSEPRLLILTDPRTDHQPIKEGALGNIPI 148

Query: 361 IAFCDTDSPMRHVDIGIPANNKGKHSIGCLFWMLARMVLQMRGTISPRQPWDVMVDLFFY 540
           IAFCDTDSPMR VDIGIPANNKGKHSIGCLFW+LARMVLQMRGTI+  Q WDVMVDLFFY
Sbjct: 149 IAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIAAGQKWDVMVDLFFY 208

Query: 541 R 543
           R
Sbjct: 209 R 209


>sp|O65751|RSSA_CICAR 40S ribosomal protein SA OS=Cicer arietinum
           GN=RAP40 PE=2 SV=1
          Length = 300

 Score =  335 bits (858), Expect = 2e-91
 Identities = 160/181 (88%), Positives = 170/181 (93%)
 Frame = +1

Query: 1   LGTKNCDFQMERYVWKRRSDGIFIINVGKTWDKLELAARVIVAIENPQDIIVQSARPYGQ 180
           LGTKNC+FQMERY++KRR+DGI+IIN+GKTWDKL LAAR+IVAIEN QDIIVQSARPYGQ
Sbjct: 28  LGTKNCNFQMERYIFKRRNDGIYIINLGKTWDKLNLAARIIVAIENSQDIIVQSARPYGQ 87

Query: 181 RAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRLLILTDPRTDHQPIKEAALGNIPI 360
           RAVLKFAQYTGA AIAGRHTPGTFTNQLQ +F EPRLLILTDPRTDHQPIKEAALGNIP 
Sbjct: 88  RAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDHQPIKEAALGNIPT 147

Query: 361 IAFCDTDSPMRHVDIGIPANNKGKHSIGCLFWMLARMVLQMRGTISPRQPWDVMVDLFFY 540
           IAFCDTDSPM +VDIGIPANNKGKHSIGCLFW+LARMVLQMRGTI P   WDVMVDLFFY
Sbjct: 148 IAFCDTDSPMNYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGLKWDVMVDLFFY 207

Query: 541 R 543
           R
Sbjct: 208 R 208


>sp|Q8H173|RSSA2_ARATH 40S ribosomal protein Sa-2 OS=Arabidopsis
           thaliana GN=RPSaB PE=1 SV=2
          Length = 280

 Score =  329 bits (844), Expect = 7e-90
 Identities = 157/181 (86%), Positives = 168/181 (92%)
 Frame = +1

Query: 1   LGTKNCDFQMERYVWKRRSDGIFIINVGKTWDKLELAARVIVAIENPQDIIVQSARPYGQ 180
           LGTKNC++QMERYV+KRR DGI+IIN+GKTWDKL++AARVIVAIENP+DIIVQSARPYGQ
Sbjct: 30  LGTKNCNYQMERYVFKRRDDGIYIINLGKTWDKLQMAARVIVAIENPKDIIVQSARPYGQ 89

Query: 181 RAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRLLILTDPRTDHQPIKEAALGNIPI 360
           RAVLKFAQYTG  AIAGRHTPGTFTNQ+Q +F EPRLLILTDPRTDHQPIKE ALGNIP 
Sbjct: 90  RAVLKFAQYTGVNAIAGRHTPGTFTNQMQTSFSEPRLLILTDPRTDHQPIKEGALGNIPT 149

Query: 361 IAFCDTDSPMRHVDIGIPANNKGKHSIGCLFWMLARMVLQMRGTISPRQPWDVMVDLFFY 540
           IAFCDTDSPM  VDIGIPANNKGKHSIGCLFW+LARMVLQMRGTI   Q WDVMVDLFFY
Sbjct: 150 IAFCDTDSPMGFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTILAAQKWDVMVDLFFY 209

Query: 541 R 543
           R
Sbjct: 210 R 210


>sp|P38981|RSSA_URECA 40S ribosomal protein SA OS=Urechis caupo PE=2
           SV=1
          Length = 317

 Score =  261 bits (667), Expect = 2e-69
 Identities = 126/181 (69%), Positives = 146/181 (80%)
 Frame = +1

Query: 1   LGTKNCDFQMERYVWKRRSDGIFIINVGKTWDKLELAARVIVAIENPQDIIVQSARPYGQ 180
           LG  N DFQME+YV+KRR DG  IINV KTW+K+ LAAR I AIENP DI V SARPYGQ
Sbjct: 25  LGANNVDFQMEQYVYKRRPDGTSIINVRKTWEKVLLAARAIAAIENPADICVISARPYGQ 84

Query: 181 RAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRLLILTDPRTDHQPIKEAALGNIPI 360
           RAVLKFA YTGA  IAGR TPGTFTNQ+Q  F EPRLL++TDP TDHQP+ EA+  NIP+
Sbjct: 85  RAVLKFAHYTGATPIAGRFTPGTFTNQIQTAFREPRLLVVTDPYTDHQPVTEASYVNIPV 144

Query: 361 IAFCDTDSPMRHVDIGIPANNKGKHSIGCLFWMLARMVLQMRGTISPRQPWDVMVDLFFY 540
           IA  +TDSP+++VDI IP NNK  HS+G ++WMLAR VL++RGTIS   PW+VMVDLFFY
Sbjct: 145 IALTNTDSPLKYVDIAIPCNNKSIHSVGLMWWMLAREVLRLRGTISREVPWEVMVDLFFY 204

Query: 541 R 543
           R
Sbjct: 205 R 205


>sp|Q01291|RS0_NEUCR 40S ribosomal protein S0 OS=Neurospora crassa
           GN=rps-0 PE=3 SV=2
          Length = 290

 Score =  258 bits (658), Expect = 3e-68
 Identities = 121/182 (66%), Positives = 150/182 (82%), Gaps = 1/182 (0%)
 Frame = +1

Query: 1   LGTKNCDFQMERYVWKRRSDGIFIINVGKTWDKLELAARVIVAIENPQDIIVQSARPYGQ 180
           +G+KN    M+ Y+WK R+DG+ I+NVGKTW+K+ LAAR+I AI+NP DI V SARPYGQ
Sbjct: 27  IGSKNLGVHMQPYLWKTRADGVNILNVGKTWEKIVLAARIIAAIDNPADICVISARPYGQ 86

Query: 181 RAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRLLILTDPRTDHQPIKEAALGNIPI 360
           RAVLKFA +TGAQAIAGR TPG+FTN +  +F EPRL+I+TDPRTD Q IKEA+  NIP+
Sbjct: 87  RAVLKFAAHTGAQAIAGRFTPGSFTNYITRSFKEPRLIIVTDPRTDAQAIKEASYVNIPV 146

Query: 361 IAFCDTDSPMRHVDIGIPANNKGKHSIGCLFWMLARMVLQMRGTISPRQ-PWDVMVDLFF 537
           IA CD DSP  +VD+ IP NNKG+H+IGC++WMLAR VL++RGTI  R+ PWDVMVDL+F
Sbjct: 147 IALCDADSPTEYVDVAIPTNNKGRHAIGCVWWMLAREVLRLRGTIYNRETPWDVMVDLYF 206

Query: 538 YR 543
           YR
Sbjct: 207 YR 208


>sp|P50890|RSSA_CHICK 40S ribosomal protein SA OS=Gallus gallus
           GN=RPSA PE=3 SV=1
          Length = 296

 Score =  256 bits (655), Expect = 6e-68
 Identities = 123/181 (67%), Positives = 147/181 (81%)
 Frame = +1

Query: 1   LGTKNCDFQMERYVWKRRSDGIFIINVGKTWDKLELAARVIVAIENPQDIIVQSARPYGQ 180
           LG  N DFQME+Y++KR+SDGI+IIN+ +TW+KL LAAR IVAIENP D+ V S+R  GQ
Sbjct: 25  LGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVSVISSRNTGQ 84

Query: 181 RAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRLLILTDPRTDHQPIKEAALGNIPI 360
           RAVLKFA  TGA  IAGR TPGTFTNQ+Q  F EPRLL++TDPR DHQP+ EA+  NIP 
Sbjct: 85  RAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNIPT 144

Query: 361 IAFCDTDSPMRHVDIGIPANNKGKHSIGCLFWMLARMVLQMRGTISPRQPWDVMVDLFFY 540
           IA C+TDSP+R+VDI IP NNKG HS+G ++WMLAR VL+MRGTIS   PW+VM DL+FY
Sbjct: 145 IALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFY 204

Query: 541 R 543
           R
Sbjct: 205 R 205


>sp|A6YRY8|RSSA_SHEEP 40S ribosomal protein SA OS=Ovis aries GN=RPSA
           PE=2 SV=1
          Length = 295

 Score =  256 bits (653), Expect = 1e-67
 Identities = 122/181 (67%), Positives = 147/181 (81%)
 Frame = +1

Query: 1   LGTKNCDFQMERYVWKRRSDGIFIINVGKTWDKLELAARVIVAIENPQDIIVQSARPYGQ 180
           LG  N DFQME+Y++KR+SDGI+IIN+ +TW+KL LAAR IVAIENP D+ V S+R  GQ
Sbjct: 25  LGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVSVISSRNTGQ 84

Query: 181 RAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRLLILTDPRTDHQPIKEAALGNIPI 360
           RAVLKFA  TGA  IAGR TPGTFTNQ+Q  F EPRLL++TDPR DHQP+ EA+  N+P 
Sbjct: 85  RAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNLPT 144

Query: 361 IAFCDTDSPMRHVDIGIPANNKGKHSIGCLFWMLARMVLQMRGTISPRQPWDVMVDLFFY 540
           IA C+TDSP+R+VDI IP NNKG HS+G ++WMLAR VL+MRGTIS   PW+VM DL+FY
Sbjct: 145 IALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFY 204

Query: 541 R 543
           R
Sbjct: 205 R 205
tr_hit_id A9S9Z5
Definition tr|A9S9Z5|A9S9Z5_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens
Align length 181
Score (bit) 345.0
E-value 1.0e-93
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956926|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0027_A09, 5'
         (664 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9S9Z5|A9S9Z5_PHYPA Predicted protein (Fragment) OS=Physcomit...   345   1e-93
tr|A9TDH1|A9TDH1_PHYPA Predicted protein OS=Physcomitrella paten...   345   2e-93
tr|A9T6E0|A9T6E0_PHYPA Predicted protein (Fragment) OS=Physcomit...   345   2e-93
tr|A9S4V0|A9S4V0_PHYPA Predicted protein OS=Physcomitrella paten...   345   2e-93
tr|A9P0C9|A9P0C9_PICSI Putative uncharacterized protein OS=Picea...   344   3e-93
tr|A9NV56|A9NV56_PICSI Putative uncharacterized protein OS=Picea...   344   3e-93
tr|A2XHR6|A2XHR6_ORYSI Putative uncharacterized protein OS=Oryza...   340   4e-92
tr|Q94HF0|Q94HF0_ORYSA Putative 40S Ribosomal protein OS=Oryza s...   338   1e-91
tr|Q10QU9|Q10QU9_ORYSJ cDNA clone:001-007-D06, full insert seque...   338   1e-91
tr|Q10QU8|Q10QU8_ORYSJ 40S ribosomal protein SA, putative, expre...   338   1e-91
tr|A2XD89|A2XD89_ORYSI Putative uncharacterized protein OS=Oryza...   338   1e-91
tr|Q8H3I3|Q8H3I3_ORYSJ Os07g0616600 protein OS=Oryza sativa subs...   338   2e-91
tr|A2YNQ0|A2YNQ0_ORYSI Putative uncharacterized protein OS=Oryza...   338   2e-91
tr|B7FID3|B7FID3_MEDTR Putative uncharacterized protein OS=Medic...   338   2e-91
tr|B6SSF3|B6SSF3_MAIZE 40S ribosomal protein SA OS=Zea mays PE=2...   338   2e-91
tr|B4FZ84|B4FZ84_MAIZE Putative uncharacterized protein OS=Zea m...   338   2e-91
tr|B4G194|B4G194_MAIZE 40S ribosomal protein SA OS=Zea mays PE=2...   337   4e-91
tr|A7P6D1|A7P6D1_VITVI Chromosome chr9 scaffold_7, whole genome ...   337   5e-91
tr|A5BUU4|A5BUU4_VITVI Putative uncharacterized protein OS=Vitis...   337   5e-91
tr|A9P891|A9P891_POPTR Putative uncharacterized protein OS=Popul...   335   1e-90
tr|Q2V4D3|Q2V4D3_ARATH Uncharacterized protein At1g72370.2 OS=Ar...   335   1e-90
tr|B6TIC4|B6TIC4_MAIZE 40S ribosomal protein SA OS=Zea mays PE=2...   335   1e-90
tr|B6T782|B6T782_MAIZE 40S ribosomal protein SA OS=Zea mays PE=2...   335   2e-90
tr|Q38M60|Q38M60_SOLTU Ribosome-associated protein p40-like OS=S...   334   3e-90
tr|Q308A0|Q308A0_SOLTU P40-like protein OS=Solanum tuberosum PE=...   334   3e-90
tr|B4FSQ4|B4FSQ4_MAIZE Putative uncharacterized protein OS=Zea m...   334   3e-90
tr|B4FTD2|B4FTD2_MAIZE Putative uncharacterized protein OS=Zea m...   333   4e-90
tr|A9P801|A9P801_POPTR Putative uncharacterized protein OS=Popul...   333   6e-90
tr|B6T6X2|B6T6X2_MAIZE 40S ribosomal protein SA OS=Zea mays PE=2...   332   1e-89
tr|A9P906|A9P906_POPTR Putative uncharacterized protein OS=Popul...   332   1e-89

>tr|A9S9Z5|A9S9Z5_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_126323 PE=3 SV=1
          Length = 305

 Score =  345 bits (885), Expect = 1e-93
 Identities = 166/181 (91%), Positives = 173/181 (95%)
 Frame = +1

Query: 1   LGTKNCDFQMERYVWKRRSDGIFIINVGKTWDKLELAARVIVAIENPQDIIVQSARPYGQ 180
           LGTKNCDFQMERYVWKRRSDGIFIINVGKT++KLELAARVI AIENPQDIIVQSARPYGQ
Sbjct: 17  LGTKNCDFQMERYVWKRRSDGIFIINVGKTYEKLELAARVIAAIENPQDIIVQSARPYGQ 76

Query: 181 RAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRLLILTDPRTDHQPIKEAALGNIPI 360
           RAVLKFAQYTG QAIAGRHTPGTFTNQLQNTF EPRLLILTDPRTDHQPI EAALGNIP+
Sbjct: 77  RAVLKFAQYTGCQAIAGRHTPGTFTNQLQNTFSEPRLLILTDPRTDHQPIMEAALGNIPV 136

Query: 361 IAFCDTDSPMRHVDIGIPANNKGKHSIGCLFWMLARMVLQMRGTISPRQPWDVMVDLFFY 540
           IAFCDTDSPM++VDI IPANNKGKHSIG LFW+LARMVLQMRGTIS  +PWDVMVDLFFY
Sbjct: 137 IAFCDTDSPMKYVDIAIPANNKGKHSIGALFWLLARMVLQMRGTISAAKPWDVMVDLFFY 196

Query: 541 R 543
           R
Sbjct: 197 R 197


>tr|A9TDH1|A9TDH1_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_193949 PE=3 SV=1
          Length = 292

 Score =  345 bits (884), Expect = 2e-93
 Identities = 166/181 (91%), Positives = 172/181 (95%)
 Frame = +1

Query: 1   LGTKNCDFQMERYVWKRRSDGIFIINVGKTWDKLELAARVIVAIENPQDIIVQSARPYGQ 180
           LGTKNCDFQMERYVWKRRSDGIFIINVGKT++KLELAARVI AIENPQDIIVQSARPYGQ
Sbjct: 16  LGTKNCDFQMERYVWKRRSDGIFIINVGKTYEKLELAARVIAAIENPQDIIVQSARPYGQ 75

Query: 181 RAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRLLILTDPRTDHQPIKEAALGNIPI 360
           RAVLKFAQYTG QAIAGRHTPGTFTNQLQNTF EPRLLILTDPRTDHQPI EAALGNIP+
Sbjct: 76  RAVLKFAQYTGCQAIAGRHTPGTFTNQLQNTFSEPRLLILTDPRTDHQPIMEAALGNIPV 135

Query: 361 IAFCDTDSPMRHVDIGIPANNKGKHSIGCLFWMLARMVLQMRGTISPRQPWDVMVDLFFY 540
           IAFCDTDSPM++VDI IPANNKGKHSIG LFW+LARMVLQMRGTIS   PWDVMVDLFFY
Sbjct: 136 IAFCDTDSPMKYVDIAIPANNKGKHSIGALFWLLARMVLQMRGTISAAHPWDVMVDLFFY 195

Query: 541 R 543
           R
Sbjct: 196 R 196


>tr|A9T6E0|A9T6E0_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_46426 PE=3 SV=1
          Length = 278

 Score =  345 bits (884), Expect = 2e-93
 Identities = 166/181 (91%), Positives = 172/181 (95%)
 Frame = +1

Query: 1   LGTKNCDFQMERYVWKRRSDGIFIINVGKTWDKLELAARVIVAIENPQDIIVQSARPYGQ 180
           LGTKNCDFQMERYVWKRRSDGIFIINVGKT++KLELAARVI AIENPQDIIVQSARPYGQ
Sbjct: 14  LGTKNCDFQMERYVWKRRSDGIFIINVGKTYEKLELAARVIAAIENPQDIIVQSARPYGQ 73

Query: 181 RAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRLLILTDPRTDHQPIKEAALGNIPI 360
           RAVLKFAQYTG QAIAGRHTPGTFTNQLQNTF EPRLLILTDPRTDHQPI EAALGNIP+
Sbjct: 74  RAVLKFAQYTGCQAIAGRHTPGTFTNQLQNTFSEPRLLILTDPRTDHQPIMEAALGNIPV 133

Query: 361 IAFCDTDSPMRHVDIGIPANNKGKHSIGCLFWMLARMVLQMRGTISPRQPWDVMVDLFFY 540
           IAFCDTDSPM++VDI IPANNKGKHSIG LFW+LARMVLQMRGTIS   PWDVMVDLFFY
Sbjct: 134 IAFCDTDSPMKYVDIAIPANNKGKHSIGALFWLLARMVLQMRGTISAAHPWDVMVDLFFY 193

Query: 541 R 543
           R
Sbjct: 194 R 194


>tr|A9S4V0|A9S4V0_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_105781 PE=3 SV=1
          Length = 292

 Score =  345 bits (884), Expect = 2e-93
 Identities = 166/181 (91%), Positives = 172/181 (95%)
 Frame = +1

Query: 1   LGTKNCDFQMERYVWKRRSDGIFIINVGKTWDKLELAARVIVAIENPQDIIVQSARPYGQ 180
           LGTKNCDFQMERYVWKRRSDGIFIINVGKT++KLELAARVI AIENPQDIIVQSARPYGQ
Sbjct: 16  LGTKNCDFQMERYVWKRRSDGIFIINVGKTYEKLELAARVIAAIENPQDIIVQSARPYGQ 75

Query: 181 RAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRLLILTDPRTDHQPIKEAALGNIPI 360
           RAVLKFAQYTG QAIAGRHTPGTFTNQLQNTF EPRLLILTDPRTDHQPI EAALGNIP+
Sbjct: 76  RAVLKFAQYTGCQAIAGRHTPGTFTNQLQNTFSEPRLLILTDPRTDHQPIMEAALGNIPV 135

Query: 361 IAFCDTDSPMRHVDIGIPANNKGKHSIGCLFWMLARMVLQMRGTISPRQPWDVMVDLFFY 540
           IAFCDTDSPM++VDI IPANNKGKHSIG LFW+LARMVLQMRGTIS   PWDVMVDLFFY
Sbjct: 136 IAFCDTDSPMKYVDIAIPANNKGKHSIGALFWLLARMVLQMRGTISAAHPWDVMVDLFFY 195

Query: 541 R 543
           R
Sbjct: 196 R 196


>tr|A9P0C9|A9P0C9_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 319

 Score =  344 bits (882), Expect = 3e-93
 Identities = 164/181 (90%), Positives = 173/181 (95%)
 Frame = +1

Query: 1   LGTKNCDFQMERYVWKRRSDGIFIINVGKTWDKLELAARVIVAIENPQDIIVQSARPYGQ 180
           LGTKNCDFQMERYV+KRRSDGIFIIN+GKTW+KL+LAARVIVAIENPQDIIVQSARPYGQ
Sbjct: 25  LGTKNCDFQMERYVYKRRSDGIFIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQ 84

Query: 181 RAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRLLILTDPRTDHQPIKEAALGNIPI 360
           RAVLKFAQYTGA AIAGRHTPGTFTNQ+Q +F EPRLLILTDPRTDHQPI+EAALGNIP 
Sbjct: 85  RAVLKFAQYTGAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIREAALGNIPT 144

Query: 361 IAFCDTDSPMRHVDIGIPANNKGKHSIGCLFWMLARMVLQMRGTISPRQPWDVMVDLFFY 540
           IAFCDTDSPM+HVDIGIPANNKGKHSIGCLFWMLARMVLQMRGTI P   WD+MVDLFFY
Sbjct: 145 IAFCDTDSPMKHVDIGIPANNKGKHSIGCLFWMLARMVLQMRGTILPGHKWDIMVDLFFY 204

Query: 541 R 543
           R
Sbjct: 205 R 205


>tr|A9NV56|A9NV56_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 319

 Score =  344 bits (882), Expect = 3e-93
 Identities = 164/181 (90%), Positives = 173/181 (95%)
 Frame = +1

Query: 1   LGTKNCDFQMERYVWKRRSDGIFIINVGKTWDKLELAARVIVAIENPQDIIVQSARPYGQ 180
           LGTKNCDFQMERYV+KRRSDGIFIIN+GKTW+KL+LAARVIVAIENPQDIIVQSARPYGQ
Sbjct: 25  LGTKNCDFQMERYVYKRRSDGIFIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQ 84

Query: 181 RAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRLLILTDPRTDHQPIKEAALGNIPI 360
           RAVLKFAQYTGA AIAGRHTPGTFTNQ+Q +F EPRLLILTDPRTDHQPI+EAALGNIP 
Sbjct: 85  RAVLKFAQYTGAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIREAALGNIPT 144

Query: 361 IAFCDTDSPMRHVDIGIPANNKGKHSIGCLFWMLARMVLQMRGTISPRQPWDVMVDLFFY 540
           IAFCDTDSPM+HVDIGIPANNKGKHSIGCLFWMLARMVLQMRGTI P   WD+MVDLFFY
Sbjct: 145 IAFCDTDSPMKHVDIGIPANNKGKHSIGCLFWMLARMVLQMRGTILPGHKWDIMVDLFFY 204

Query: 541 R 543
           R
Sbjct: 205 R 205


>tr|A2XHR6|A2XHR6_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_11954 PE=3 SV=1
          Length = 310

 Score =  340 bits (873), Expect = 4e-92
 Identities = 164/181 (90%), Positives = 172/181 (95%)
 Frame = +1

Query: 1   LGTKNCDFQMERYVWKRRSDGIFIINVGKTWDKLELAARVIVAIENPQDIIVQSARPYGQ 180
           LGTKNCDFQMERYV+KRRSDGIFIIN+GKTW+KL+LAARVIVAIENPQDIIVQSARPYGQ
Sbjct: 31  LGTKNCDFQMERYVYKRRSDGIFIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQ 90

Query: 181 RAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRLLILTDPRTDHQPIKEAALGNIPI 360
           RAVLKFAQYTGA AIAGRHTPGTFTNQLQ +F EPRLLILTDPRTDHQPIKE+ALGNIP 
Sbjct: 91  RAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDHQPIKESALGNIPT 150

Query: 361 IAFCDTDSPMRHVDIGIPANNKGKHSIGCLFWMLARMVLQMRGTISPRQPWDVMVDLFFY 540
           IAFCDTDSPMR+VDIGIPANNKGK SIGCLFW+LARMVLQMRGTI P   WDVMVDLFFY
Sbjct: 151 IAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTILPGHKWDVMVDLFFY 210

Query: 541 R 543
           R
Sbjct: 211 R 211


>tr|Q94HF0|Q94HF0_ORYSA Putative 40S Ribosomal protein OS=Oryza
           sativa GN=OSJNBa0032G08.18 PE=3 SV=1
          Length = 305

 Score =  338 bits (868), Expect = 1e-91
 Identities = 162/181 (89%), Positives = 173/181 (95%)
 Frame = +1

Query: 1   LGTKNCDFQMERYVWKRRSDGIFIINVGKTWDKLELAARVIVAIENPQDIIVQSARPYGQ 180
           LGTKNCDFQMERYV+KRRSDGI+IIN+GKTW+KL+LAARVIVAIENPQDIIVQSARPYGQ
Sbjct: 29  LGTKNCDFQMERYVYKRRSDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQ 88

Query: 181 RAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRLLILTDPRTDHQPIKEAALGNIPI 360
           RAVLKFAQYTGA AIAGRHTPGTFTNQLQ +F EPRLLILTDPRTDHQPIKE+ALGNIP 
Sbjct: 89  RAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDHQPIKESALGNIPT 148

Query: 361 IAFCDTDSPMRHVDIGIPANNKGKHSIGCLFWMLARMVLQMRGTISPRQPWDVMVDLFFY 540
           IAFCDTDSPMR+VDIGIPANNKG++SIGCLFW+LARMVLQMRGTI P   WDVMVDLFFY
Sbjct: 149 IAFCDTDSPMRYVDIGIPANNKGRNSIGCLFWLLARMVLQMRGTILPGHKWDVMVDLFFY 208

Query: 541 R 543
           R
Sbjct: 209 R 209


>tr|Q10QU9|Q10QU9_ORYSJ cDNA clone:001-007-D06, full insert sequence
           OS=Oryza sativa subsp. japonica GN=LOC_Os03g08440 PE=2
           SV=1
          Length = 305

 Score =  338 bits (868), Expect = 1e-91
 Identities = 162/181 (89%), Positives = 173/181 (95%)
 Frame = +1

Query: 1   LGTKNCDFQMERYVWKRRSDGIFIINVGKTWDKLELAARVIVAIENPQDIIVQSARPYGQ 180
           LGTKNCDFQMERYV+KRRSDGI+IIN+GKTW+KL+LAARVIVAIENPQDIIVQSARPYGQ
Sbjct: 29  LGTKNCDFQMERYVYKRRSDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQ 88

Query: 181 RAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRLLILTDPRTDHQPIKEAALGNIPI 360
           RAVLKFAQYTGA AIAGRHTPGTFTNQLQ +F EPRLLILTDPRTDHQPIKE+ALGNIP 
Sbjct: 89  RAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDHQPIKESALGNIPT 148

Query: 361 IAFCDTDSPMRHVDIGIPANNKGKHSIGCLFWMLARMVLQMRGTISPRQPWDVMVDLFFY 540
           IAFCDTDSPMR+VDIGIPANNKG++SIGCLFW+LARMVLQMRGTI P   WDVMVDLFFY
Sbjct: 149 IAFCDTDSPMRYVDIGIPANNKGRNSIGCLFWLLARMVLQMRGTILPGHKWDVMVDLFFY 208

Query: 541 R 543
           R
Sbjct: 209 R 209


>tr|Q10QU8|Q10QU8_ORYSJ 40S ribosomal protein SA, putative,
           expressed OS=Oryza sativa subsp. japonica
           GN=LOC_Os03g08440 PE=3 SV=1
          Length = 269

 Score =  338 bits (868), Expect = 1e-91
 Identities = 162/181 (89%), Positives = 173/181 (95%)
 Frame = +1

Query: 1   LGTKNCDFQMERYVWKRRSDGIFIINVGKTWDKLELAARVIVAIENPQDIIVQSARPYGQ 180
           LGTKNCDFQMERYV+KRRSDGI+IIN+GKTW+KL+LAARVIVAIENPQDIIVQSARPYGQ
Sbjct: 29  LGTKNCDFQMERYVYKRRSDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQ 88

Query: 181 RAVLKFAQYTGAQAIAGRHTPGTFTNQLQNTFCEPRLLILTDPRTDHQPIKEAALGNIPI 360
           RAVLKFAQYTGA AIAGRHTPGTFTNQLQ +F EPRLLILTDPRTDHQPIKE+ALGNIP 
Sbjct: 89  RAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDHQPIKESALGNIPT 148

Query: 361 IAFCDTDSPMRHVDIGIPANNKGKHSIGCLFWMLARMVLQMRGTISPRQPWDVMVDLFFY 540
           IAFCDTDSPMR+VDIGIPANNKG++SIGCLFW+LARMVLQMRGTI P   WDVMVDLFFY
Sbjct: 149 IAFCDTDSPMRYVDIGIPANNKGRNSIGCLFWLLARMVLQMRGTILPGHKWDVMVDLFFY 208

Query: 541 R 543
           R
Sbjct: 209 R 209