DK957003 |
Clone id |
TST39A01NGRL0027_D14 |
Library |
TST39 |
Length |
491 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0027_D14. 5' end sequence. |
Accession |
DK957003 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL13Contig1 |
Sequence |
ACTCCCAGAAGTTGGAGTGCTGCGCGGCCAAGCTCAGATCCAGGTATTGGGTGTACCTCT GTAAAGGATTTTTACATTGGGAGTAGTTTTACAAGTCAGCCAAAATGGTGAAGTTTACAA CTGAAGAGCTGCGTAGGATCATGGACAAGAAGAACAACATTAGGAATATGTCTGTTATCG CCCATGTGGATCATGGGAAATCTACCTTAACAGACTCTCTTGTGGCTGCTGCTGGTATCA TTGCTCAAGAGGTCGCTGGAGATGTGCGCCTGACAGACACCCGTCAAGATGAGGCTGAAC GTGGCATTACCATCAAATCTACTGGGATCTCCCTGTACTATGAAATGTCTGAAAAATCTT TGAAAGATTACAAGGGTGAGAAGGATGGGAATGACTACTTGATTAATCTAATTGATTCTC CGGGCCATGTCGACTTTTCTTCGGAGGTTACTGCAGCTTTGCGCATCAACAGATGGTGCC TTGGTGGTGGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O23755 |
Definition |
sp|O23755|EF2_BETVU Elongation factor 2 OS=Beta vulgaris |
Align length |
121 |
Score (bit) |
209.0 |
E-value |
5.0e-54 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q7XTK1 |
Definition |
tr|Q7XTK1|Q7XTK1_ORYSJ Os04g0118400 protein OS=Oryza sativa subsp. japonica |
Align length |
121 |
Score (bit) |
221.0 |
E-value |
2.0e-56 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957003|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0027_D14, 5' (491 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q7XTK1|Q7XTK1_ORYSJ Os04g0118400 protein OS=Oryza sativa subs... 221 2e-56 tr|Q6H4L2|Q6H4L2_ORYSJ Os02g0519900 protein OS=Oryza sativa subs... 221 2e-56 tr|Q01MK8|Q01MK8_ORYSA H0613H07.5 protein OS=Oryza sativa GN=H06... 221 2e-56 tr|A2X5F3|A2X5F3_ORYSI Putative uncharacterized protein OS=Oryza... 221 2e-56 tr|A9SYQ5|A9SYQ5_PHYPA Predicted protein (Fragment) OS=Physcomit... 220 2e-56 tr|A9SYQ2|A9SYQ2_PHYPA Predicted protein OS=Physcomitrella paten... 220 2e-56 tr|B6U0S1|B6U0S1_MAIZE Elongation factor 2 OS=Zea mays PE=2 SV=1 220 3e-56 tr|Q5JKU5|Q5JKU5_ORYSJ cDNA clone:001-115-C05, full insert seque... 217 2e-55 tr|A2WUX6|A2WUX6_ORYSI Putative uncharacterized protein OS=Oryza... 217 3e-55 tr|A9U6Z5|A9U6Z5_PHYPA Predicted protein (Fragment) OS=Physcomit... 216 6e-55 tr|A9U245|A9U245_PHYPA Predicted protein OS=Physcomitrella paten... 216 6e-55 tr|Q9ASR1|Q9ASR1_ARATH At1g56070/T6H22_13 (Putative elongation f... 211 2e-53 tr|Q9SGT4|Q9SGT4_ARATH Elongation factor EF-2 OS=Arabidopsis tha... 209 7e-53 tr|A2ZXD6|A2ZXD6_ORYSJ Putative uncharacterized protein OS=Oryza... 208 9e-53 tr|Q8W0C4|Q8W0C4_ORYSJ cDNA clone:J033048F11, full insert sequen... 205 1e-51 tr|A9SYQ7|A9SYQ7_PHYPA Predicted protein OS=Physcomitrella paten... 205 1e-51 tr|A2WUL5|A2WUL5_ORYSI Putative uncharacterized protein OS=Oryza... 205 1e-51 tr|A8JHX9|A8JHX9_CHLRE Elongation factor 2 OS=Chlamydomonas rein... 198 1e-49 tr|A4SB22|A4SB22_OSTLU Predicted protein OS=Ostreococcus lucimar... 179 6e-44 tr|A9V921|A9V921_MONBE Predicted protein OS=Monosiga brevicollis... 175 1e-42 tr|Q3UMI7|Q3UMI7_MOUSE Putative uncharacterized protein OS=Mus m... 174 2e-42 tr|A7PWR7|A7PWR7_VITVI Chromosome chr19 scaffold_35, whole genom... 174 2e-42 tr|Q52MA1|Q52MA1_XENLA Putative uncharacterized protein OS=Xenop... 174 3e-42 tr|Q8C153|Q8C153_MOUSE Putative uncharacterized protein OS=Mus m... 174 3e-42 tr|Q8BMA8|Q8BMA8_MOUSE Putative uncharacterized protein OS=Mus m... 174 3e-42 tr|Q60423|Q60423_CRIGR Elongation factor 2 OS=Cricetulus griseus... 174 3e-42 tr|Q3UZ14|Q3UZ14_MOUSE Putative uncharacterized protein OS=Mus m... 174 3e-42 tr|Q3UDC8|Q3UDC8_MOUSE Putative uncharacterized protein OS=Mus m... 174 3e-42 tr|Q3UBL9|Q3UBL9_MOUSE Putative uncharacterized protein OS=Mus m... 174 3e-42 tr|Q3TX47|Q3TX47_MOUSE Putative uncharacterized protein OS=Mus m... 174 3e-42
>tr|Q7XTK1|Q7XTK1_ORYSJ Os04g0118400 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0020P07.3 PE=2 SV=2 Length = 843
Score = 221 bits (562), Expect = 2e-56 Identities = 112/121 (92%), Positives = 118/121 (97%) Frame = +3
Query: 105 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 284 MVKFT EELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVR+TDTR Sbjct: 1 MVKFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 60
Query: 285 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSEVTAALR 464 DEAERGITIKSTGISL+YEMS++SLK YKGE+DGN+YLINLIDSPGHVDFSSEVTAALR Sbjct: 61 ADEAERGITIKSTGISLFYEMSDESLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAALR 120
Query: 465 I 467 I Sbjct: 121 I 121
>tr|Q6H4L2|Q6H4L2_ORYSJ Os02g0519900 protein OS=Oryza sativa subsp. japonica GN=P0461D06.32 PE=2 SV=1 Length = 843
Score = 221 bits (562), Expect = 2e-56 Identities = 112/121 (92%), Positives = 118/121 (97%) Frame = +3
Query: 105 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 284 MVKFT EELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVR+TDTR Sbjct: 1 MVKFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 60
Query: 285 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSEVTAALR 464 DEAERGITIKSTGISL+YEMS++SLK YKGE+DGN+YLINLIDSPGHVDFSSEVTAALR Sbjct: 61 ADEAERGITIKSTGISLFYEMSDESLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAALR 120
Query: 465 I 467 I Sbjct: 121 I 121
>tr|Q01MK8|Q01MK8_ORYSA H0613H07.5 protein OS=Oryza sativa GN=H0613H07.5 PE=4 SV=1 Length = 843
Score = 221 bits (562), Expect = 2e-56 Identities = 112/121 (92%), Positives = 118/121 (97%) Frame = +3
Query: 105 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 284 MVKFT EELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVR+TDTR Sbjct: 1 MVKFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 60
Query: 285 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSEVTAALR 464 DEAERGITIKSTGISL+YEMS++SLK YKGE+DGN+YLINLIDSPGHVDFSSEVTAALR Sbjct: 61 ADEAERGITIKSTGISLFYEMSDESLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAALR 120
Query: 465 I 467 I Sbjct: 121 I 121
>tr|A2X5F3|A2X5F3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_07431 PE=4 SV=1 Length = 843
Score = 221 bits (562), Expect = 2e-56 Identities = 112/121 (92%), Positives = 118/121 (97%) Frame = +3
Query: 105 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 284 MVKFT EELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVR+TDTR Sbjct: 1 MVKFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 60
Query: 285 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSEVTAALR 464 DEAERGITIKSTGISL+YEMS++SLK YKGE+DGN+YLINLIDSPGHVDFSSEVTAALR Sbjct: 61 ADEAERGITIKSTGISLFYEMSDESLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAALR 120
Query: 465 I 467 I Sbjct: 121 I 121
>tr|A9SYQ5|A9SYQ5_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_217194 PE=4 SV=1 Length = 451
Score = 220 bits (561), Expect = 2e-56 Identities = 111/121 (91%), Positives = 118/121 (97%) Frame = +3
Query: 105 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 284 MVKF+ +ELR IMDKK+NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQE AGDVRLTDTR Sbjct: 1 MVKFSADELRAIMDKKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQETAGDVRLTDTR 60
Query: 285 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSEVTAALR 464 QDEA+RGITIKSTGISLYYEM+E+SLKDYKGEKDG+DYLINLIDSPGHVDFSSEVTAALR Sbjct: 61 QDEADRGITIKSTGISLYYEMTEESLKDYKGEKDGHDYLINLIDSPGHVDFSSEVTAALR 120
Query: 465 I 467 I Sbjct: 121 I 121
>tr|A9SYQ2|A9SYQ2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_189887 PE=4 SV=1 Length = 843
Score = 220 bits (561), Expect = 2e-56 Identities = 111/121 (91%), Positives = 118/121 (97%) Frame = +3
Query: 105 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 284 MVKF+ +ELR IMDKK+NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQE AGDVRLTDTR Sbjct: 1 MVKFSADELRAIMDKKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQETAGDVRLTDTR 60
Query: 285 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSEVTAALR 464 QDEA+RGITIKSTGISLYYEM+E+SLKDYKGEKDG+DYLINLIDSPGHVDFSSEVTAALR Sbjct: 61 QDEADRGITIKSTGISLYYEMTEESLKDYKGEKDGHDYLINLIDSPGHVDFSSEVTAALR 120
Query: 465 I 467 I Sbjct: 121 I 121
>tr|B6U0S1|B6U0S1_MAIZE Elongation factor 2 OS=Zea mays PE=2 SV=1 Length = 843
Score = 220 bits (560), Expect = 3e-56 Identities = 111/121 (91%), Positives = 117/121 (96%) Frame = +3
Query: 105 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 284 MVKFT EELR IMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVR+TDTR Sbjct: 1 MVKFTAEELRAIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTR 60
Query: 285 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSEVTAALR 464 DEAERGITIKSTGISLYYEM+++SLK+YKGE+DGN YLINLIDSPGHVDFSSEVTAALR Sbjct: 61 ADEAERGITIKSTGISLYYEMTDESLKNYKGERDGNQYLINLIDSPGHVDFSSEVTAALR 120
Query: 465 I 467 I Sbjct: 121 I 121
>tr|Q5JKU5|Q5JKU5_ORYSJ cDNA clone:001-115-C05, full insert sequence OS=Oryza sativa subsp. japonica GN=P0439E07.16 PE=2 SV=1 Length = 826
Score = 217 bits (553), Expect = 2e-55 Identities = 107/121 (88%), Positives = 118/121 (97%) Frame = +3
Query: 105 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 284 MVKFT EE+RRIMDKK+NIRNMSV+AHVDHGKSTLTDSLVAAAGIIAQ+VAGDVR+TD+R Sbjct: 1 MVKFTVEEMRRIMDKKHNIRNMSVVAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDSR 60
Query: 285 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSEVTAALR 464 DEAERGITIKSTGISLYYEMS++SLK YKG++DGN+YLINLIDSPGHVDFSSEVTAALR Sbjct: 61 SDEAERGITIKSTGISLYYEMSDESLKSYKGDRDGNEYLINLIDSPGHVDFSSEVTAALR 120
Query: 465 I 467 I Sbjct: 121 I 121
>tr|A2WUX6|A2WUX6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_03688 PE=4 SV=1 Length = 826
Score = 217 bits (552), Expect = 3e-55 Identities = 107/121 (88%), Positives = 118/121 (97%) Frame = +3
Query: 105 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 284 MVKFT EE+RRIMDKK+NIRNMSV+AHVDHGKSTLTDSLVAAAGIIAQ+VAGDVR+TD+R Sbjct: 1 MVKFTVEEMRRIMDKKHNIRNMSVVAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDSR 60
Query: 285 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSEVTAALR 464 DEAERGITIKSTGISLYYEMS++SLK YKG++DGN+YLINLIDSPGHVDFSSEVTAALR Sbjct: 61 ADEAERGITIKSTGISLYYEMSDESLKSYKGDRDGNEYLINLIDSPGHVDFSSEVTAALR 120
Query: 465 I 467 I Sbjct: 121 I 121
>tr|A9U6Z5|A9U6Z5_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_228450 PE=4 SV=1 Length = 545
Score = 216 bits (549), Expect = 6e-55 Identities = 110/121 (90%), Positives = 115/121 (95%) Frame = +3
Query: 105 MVKFTTEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRLTDTR 284 MVKF+ EELR IMDKK+NIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQE AGDVRLTDTR Sbjct: 1 MVKFSAEELRAIMDKKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQETAGDVRLTDTR 60
Query: 285 QDEAERGITIKSTGISLYYEMSEKSLKDYKGEKDGNDYLINLIDSPGHVDFSSEVTAALR 464 QDEA+RGITIKSTGISLYYEM+ +SLKDY GEKDG DYLINLIDSPGHVDFSSEVTAALR Sbjct: 61 QDEADRGITIKSTGISLYYEMTSESLKDYHGEKDGCDYLINLIDSPGHVDFSSEVTAALR 120
Query: 465 I 467 I Sbjct: 121 I 121
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