DK957017 |
Clone id |
TST39A01NGRL0027_E04 |
Library |
TST39 |
Length |
665 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0027_E04. 5' end sequence. |
Accession |
DK957017 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL228Contig1 |
Sequence |
ATTTGTATTACATTTCTTCTCTGAGGCGTCTGTTTGAGGGGTTCGAGACCGACATCGCCA TCGCTGCAGTGCCGGCAAGCTTCCCCCCTCATTCCCTCTGTTCGCAGTCCCGTGATCATG AATCCTGAATATGACTATCTTTTCAAACTTTTGCTGATTGGTGATTCGGGCGTTGGGAAA TCTTGCCTTTTGCTTCGGTTTGCTGATGATTCTTATCTGGAAAGCTACATCAGCACAATT GGTGTCGACTTTAAAATTCGCACAGTTGAACTTGACAGCAAAACCATCAAGCTACAGATT TGGGACACTGCTGGTCAAGAGCGATTTCGGACAATCACAAGCAGCTATTATCGGGGAGCT CATGGCATTATTATCGTTTATGACGTTACAGACCAGGAAAGCTTCAACAATGTAAAGCAG TGGTTGAATGAAATTGATCGTTATGCTAGTGAAAATGTGAACAAACTTTTGGTTGGGAAC AAGAGCGATTTGACAGCAAAGAAAGTTGTTGATACACAAACTGCTAAGGCATATGCTGAT GAAATTGGCATTCCCTTTCTGGAAACGAGTGCAAAGAATGCGAGTAATGTGGAGGAAGCA TTTATGACCATGGCGGCAGAAATAAAGAACAGAATGGCAAGTCAACCAGCAATGAACGCG AACAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P31584 |
Definition |
sp|P31584|YPTV1_VOLCA GTP-binding protein yptV1 OS=Volvox carteri |
Align length |
177 |
Score (bit) |
330.0 |
E-value |
3.0e-90 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NKP5 |
Definition |
tr|A9NKP5|A9NKP5_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
181 |
Score (bit) |
346.0 |
E-value |
8.0e-94 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957017|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0027_E04, 5' (665 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NKP5|A9NKP5_PICSI Putative uncharacterized protein OS=Picea... 346 8e-94 tr|A9SLS3|A9SLS3_PHYPA Rab1/RabD-family small GTPase OS=Physcomi... 341 3e-92 tr|A9SMJ7|A9SMJ7_PHYPA Rab1/RabD-family small GTPase OS=Physcomi... 340 5e-92 tr|A9NPH9|A9NPH9_PICSI Putative uncharacterized protein OS=Picea... 338 2e-91 tr|A9PEC2|A9PEC2_POPTR Putative uncharacterized protein OS=Popul... 335 1e-90 tr|A7R0F4|A7R0F4_VITVI Chromosome undetermined scaffold_306, who... 335 1e-90 tr|B7FH02|B7FH02_MEDTR Putative uncharacterized protein OS=Medic... 333 4e-90 tr|Q9SXT5|Q9SXT5_CICAR Rab-type small GTP-binding protein OS=Cic... 332 1e-89 tr|B3TLR9|B3TLR9_ELAGV Ras-related protein RIC1 OS=Elaeis guinee... 332 1e-89 tr|Q08153|Q08153_PEA GTP-binding protein OS=Pisum sativum PE=2 SV=1 331 3e-89 tr|A9P8E1|A9P8E1_POPTR Putative uncharacterized protein OS=Popul... 331 3e-89 tr|Q1WK27|Q1WK27_CHLIN YptC1 OS=Chlamydomonas incerta GN=yptC1 P... 330 4e-89 tr|A8JHQ7|A8JHQ7_CHLRE Small rab-related GTPase OS=Chlamydomonas... 330 4e-89 tr|Q40203|Q40203_LOTJA RAB1C OS=Lotus japonicus GN=rab1C PE=2 SV=1 330 6e-89 tr|B4FC26|B4FC26_MAIZE Putative uncharacterized protein OS=Zea m... 328 2e-88 tr|A7PBQ0|A7PBQ0_VITVI Chromosome chr16 scaffold_10, whole genom... 328 2e-88 tr|O24112|O24112_NICPL Small GTP-binding protein OS=Nicotiana pl... 328 2e-88 tr|Q949E2|Q949E2_ORYSA Putative GTP-binding protein OS=Oryza sat... 327 3e-88 tr|Q6H8G2|Q6H8G2_ORYSJ cDNA, clone: J100058B03, full insert sequ... 327 3e-88 tr|Q0JQ62|Q0JQ62_ORYSJ cDNA clone:006-208-C02, full insert seque... 327 3e-88 tr|A2WLD6|A2WLD6_ORYSI Putative uncharacterized protein OS=Oryza... 327 3e-88 tr|B4FQY4|B4FQY4_MAIZE Putative uncharacterized protein OS=Zea m... 327 4e-88 tr|Q2A9H3|Q2A9H3_BRAOL GTP-binding protein, putative OS=Brassica... 325 1e-87 tr|A9PBJ4|A9PBJ4_POPTR Putative uncharacterized protein OS=Popul... 325 2e-87 tr|Q9FPJ4|Q9FPJ4_ARATH AT5g47200 (Ras-related small GTP-binding ... 324 3e-87 tr|Q41338|Q41338_SOLLC Small GTP-binding protein OS=Solanum lyco... 324 3e-87 tr|Q2A9V7|Q2A9V7_BRAOL GTP-binding protein, putative OS=Brassica... 324 3e-87 tr|Q0JLX8|Q0JLX8_ORYSJ cDNA, clone: J100084E08, full insert sequ... 324 3e-87 tr|A2WRD4|A2WRD4_ORYSI Putative uncharacterized protein OS=Oryza... 324 3e-87 tr|Q68V18|Q68V18_POAPR RAB1-like OS=Poa pratensis GN=rab1-1 PE=2... 323 5e-87
>tr|A9NKP5|A9NKP5_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 202
Score = 346 bits (887), Expect = 8e-94 Identities = 173/181 (95%), Positives = 178/181 (98%) Frame = +1
Query: 118 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 297 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELD KTIKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQ 60
Query: 298 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 477 IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 478 NKSDLTAKKVVDTQTAKAYADEIGIPFLETSAKNASNVEEAFMTMAAEIKNRMASQPAMN 657 NK+DLTAKKVVD QTAKA+ADEIGIPFLETSAKNA NVE+AFMTMAAEIKNRMASQPAMN Sbjct: 121 NKNDLTAKKVVDYQTAKAFADEIGIPFLETSAKNAINVEDAFMTMAAEIKNRMASQPAMN 180
Query: 658 A 660 + Sbjct: 181 S 181
>tr|A9SLS3|A9SLS3_PHYPA Rab1/RabD-family small GTPase OS=Physcomitrella patens subsp. patens GN=RabD11 PE=3 SV=1 Length = 204
Score = 341 bits (874), Expect = 3e-92 Identities = 169/181 (93%), Positives = 178/181 (98%) Frame = +1
Query: 118 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 297 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELD KTIKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQ 60
Query: 298 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 477 IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 478 NKSDLTAKKVVDTQTAKAYADEIGIPFLETSAKNASNVEEAFMTMAAEIKNRMASQPAMN 657 NKSDL +KKVVD +TAKA+ADEIGIPFLETSAKNA+NVE+AFMTMAAEIKNRMASQPA++ Sbjct: 121 NKSDLASKKVVDYETAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPALS 180
Query: 658 A 660 + Sbjct: 181 S 181
>tr|A9SMJ7|A9SMJ7_PHYPA Rab1/RabD-family small GTPase OS=Physcomitrella patens subsp. patens GN=RabD12 PE=3 SV=1 Length = 203
Score = 340 bits (872), Expect = 5e-92 Identities = 170/181 (93%), Positives = 177/181 (97%) Frame = +1
Query: 118 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 297 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELD KTIKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQ 60
Query: 298 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 477 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 478 NKSDLTAKKVVDTQTAKAYADEIGIPFLETSAKNASNVEEAFMTMAAEIKNRMASQPAMN 657 NKSDL +KKVVD TAKA+ADEIGIPFLETSAKNA+NVE+AFMTMAAEIKNRMASQPA++ Sbjct: 121 NKSDLASKKVVDYATAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPALS 180
Query: 658 A 660 + Sbjct: 181 S 181
>tr|A9NPH9|A9NPH9_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 202
Score = 338 bits (866), Expect = 2e-91 Identities = 168/182 (92%), Positives = 175/182 (96%) Frame = +1
Query: 118 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 297 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVE D KTIKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 298 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 477 IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 478 NKSDLTAKKVVDTQTAKAYADEIGIPFLETSAKNASNVEEAFMTMAAEIKNRMASQPAMN 657 NK DLTA + VD TAKA+ADEIGIPFLETSAKNA+NVE+AFMTMAAEIKNRMASQPAMN Sbjct: 121 NKCDLTANRAVDYDTAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPAMN 180
Query: 658 AN 663 ++ Sbjct: 181 SS 182
>tr|A9PEC2|A9PEC2_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 203
Score = 335 bits (860), Expect = 1e-90 Identities = 167/180 (92%), Positives = 173/180 (96%) Frame = +1
Query: 118 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 297 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVE D KTIKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 298 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 477 IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 478 NKSDLTAKKVVDTQTAKAYADEIGIPFLETSAKNASNVEEAFMTMAAEIKNRMASQPAMN 657 NK DLTA KVV +TAKA+ADEIGIPF+ETSAKNA+NVE+AFM MAAEIKNRMASQPAMN Sbjct: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQPAMN 180
>tr|A7R0F4|A7R0F4_VITVI Chromosome undetermined scaffold_306, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00011421001 PE=3 SV=1 Length = 203
Score = 335 bits (860), Expect = 1e-90 Identities = 167/180 (92%), Positives = 173/180 (96%) Frame = +1
Query: 118 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 297 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVE D KTIKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 298 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 477 IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 478 NKSDLTAKKVVDTQTAKAYADEIGIPFLETSAKNASNVEEAFMTMAAEIKNRMASQPAMN 657 NK DLTA KVV +TAKA+ADEIGIPF+ETSAKNA+NVE+AFM MAAEIKNRMASQPAMN Sbjct: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQPAMN 180
>tr|B7FH02|B7FH02_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 202
Score = 333 bits (855), Expect = 4e-90 Identities = 166/181 (91%), Positives = 175/181 (96%) Frame = +1
Query: 118 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 297 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYL+SYISTIGVDFKIRTVE D KTIKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 298 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 477 IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 478 NKSDLTAKKVVDTQTAKAYADEIGIPFLETSAKNASNVEEAFMTMAAEIKNRMASQPAMN 657 NKSDL+ KKVV ++TAKA+ADEIGIPF+ETSAKNASNVE+AFM MAAEIKNRMASQPA + Sbjct: 121 NKSDLSDKKVVSSETAKAFADEIGIPFMETSAKNASNVEQAFMAMAAEIKNRMASQPANS 180
Query: 658 A 660 A Sbjct: 181 A 181
>tr|Q9SXT5|Q9SXT5_CICAR Rab-type small GTP-binding protein OS=Cicer arietinum PE=2 SV=1 Length = 202
Score = 332 bits (852), Expect = 1e-89 Identities = 165/181 (91%), Positives = 173/181 (95%) Frame = +1
Query: 118 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 297 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYL+SYISTIGVDFKIRTVE D KTIKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 298 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 477 IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 478 NKSDLTAKKVVDTQTAKAYADEIGIPFLETSAKNASNVEEAFMTMAAEIKNRMASQPAMN 657 NK DL A KVV ++TAKA+ADEIGIPF+ETSAKNA+NVE+AFM MAAEIKNRMASQPA N Sbjct: 121 NKCDLAANKVVSSETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQPANN 180
Query: 658 A 660 A Sbjct: 181 A 181
>tr|B3TLR9|B3TLR9_ELAGV Ras-related protein RIC1 OS=Elaeis guineensis var. tenera PE=2 SV=1 Length = 202
Score = 332 bits (851), Expect = 1e-89 Identities = 165/182 (90%), Positives = 174/182 (95%) Frame = +1
Query: 118 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 297 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVE D KTIKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 298 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 477 IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWLNEIDRYAS+NVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
Query: 478 NKSDLTAKKVVDTQTAKAYADEIGIPFLETSAKNASNVEEAFMTMAAEIKNRMASQPAMN 657 NK DL A +VV +T KA+ADEIGIPFLETSAK+A+NVE+AFMTMAAEIKNRMASQPAMN Sbjct: 121 NKCDLAANRVVSYETGKAFADEIGIPFLETSAKDATNVEKAFMTMAAEIKNRMASQPAMN 180
Query: 658 AN 663 A+ Sbjct: 181 AS 182
>tr|Q08153|Q08153_PEA GTP-binding protein OS=Pisum sativum PE=2 SV=1 Length = 202
Score = 331 bits (848), Expect = 3e-89 Identities = 164/181 (90%), Positives = 173/181 (95%) Frame = +1
Query: 118 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 297 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYL+SYISTIGVDFKIRTVE D KTIKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 298 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 477 IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 478 NKSDLTAKKVVDTQTAKAYADEIGIPFLETSAKNASNVEEAFMTMAAEIKNRMASQPAMN 657 NKSDL KVV ++TAKA+ADEIGIPF+ETSAKNA+NVE+AFM MAAEIKNRMASQP+ N Sbjct: 121 NKSDLADNKVVSSETAKAFADEIGIPFMETSAKNANNVEQAFMAMAAEIKNRMASQPSNN 180
Query: 658 A 660 A Sbjct: 181 A 181
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