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NBDC - LSDB Archive
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DK957023
Clone id TST39A01NGRL0027_E10
Library
Length 559
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0027_E10. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CTTCAACTCCCGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAGGTGCAGAAGCCATGACGA
GCGCGTTAGATATGGCGCTTGATGATCTGATTAAGACCAACAAGCAGAGCTCGGGAGAAG
GTAGAGGCAGGGGTGGGCGTGGCCGAGCGCGCCGAGGCCGGGGCGCCTCTTCTGCGGGTC
CGATTCGCAAGAATTCCACTCGATCTACCACCCGCCCGTCCCCCTACTCTTTCACCACGC
CTGCACAGAGAGCTCCAGAGGGTCAGTGGGATCATGATTTGTATGAGGAAGGTGCAAGTG
TGGCTCCTTTGCGACCAAATACAGGAATTGAGACAGGCACTAAGCTTTTTATATCCAACT
TGGATTTTGGGGTATCAAATGAAGATATTAAGGAGCTTTTTTTCAGAAATTGGTGACATC
AAGCGGAGCACTGTTCATTACGACAGGAGTGGCCGCTCAAAGGGCACCGCAGAAGTTGTT
TATTCAAGAAGAGCTGATGCTGTAGCAGCCTCGAAAAGGACAATAACCTGCCAGCTTGAT
GGCAAACCCAAATGAAAAT
■■Homology search results ■■ -
sp_hit_id Q9JJW6
Definition sp|Q9JJW6|REFP2_MOUSE RNA and export factor-binding protein 2 OS=Mus musculus
Align length 116
Score (bit) 55.1
E-value 9.0e-18
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK957023|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0027_E10, 5'
         (546 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9JJW6|REFP2_MOUSE RNA and export factor-binding protein 2 OS...    55   9e-18
sp|Q86V81|THOC4_HUMAN THO complex subunit 4 OS=Homo sapiens GN=T...    57   2e-17
sp|O08583|THOC4_MOUSE THO complex subunit 4 OS=Mus musculus GN=T...    57   2e-17
sp|Q9P2K5|MYEF2_HUMAN Myelin expression factor 2 OS=Homo sapiens...    34   0.003
sp|Q8C854|MYEF2_MOUSE Myelin expression factor 2 OS=Mus musculus...    34   0.003
sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=...    31   0.009
sp|Q09330|MLO3_SCHPO mRNA export protein mlo3 OS=Schizosaccharom...    39   0.017
sp|Q05196|PABP5_ARATH Polyadenylate-binding protein 5 OS=Arabido...    29   0.042
sp|O64380|PABP3_ARATH Polyadenylate-binding protein 3 OS=Arabido...    30   0.054
sp|Q9ZUU4|ROC1_ARATH Putative ribonucleoprotein At2g37220, chlor...    36   0.073
sp|Q6PFR5|TRA2A_MOUSE Transformer-2 protein homolog OS=Mus muscu...    37   0.082
sp|Q13595|TRA2A_HUMAN Transformer-2 protein homolog OS=Homo sapi...    37   0.082
sp|Q0U1G2|PABP_PHANO Polyadenylate-binding protein, cytoplasmic ...    28   0.11 
sp|Q2UK72|PABP_ASPOR Polyadenylate-binding protein, cytoplasmic ...    29   0.24 
sp|Q8WP23|BOLL_MACFA Protein boule-like OS=Macaca fascicularis G...    34   0.53 
sp|Q8N9W6|BOLL_HUMAN Protein boule-like OS=Homo sapiens GN=BOLL ...    34   0.53 
sp|Q8BG81|PDIP3_MOUSE Polymerase delta-interacting protein 3 OS=...    27   0.54 
sp|P62997|TRA2B_RAT Splicing factor, arginine/serine-rich 10 OS=...    33   0.69 
sp|P62996|TRA2B_MOUSE Splicing factor, arginine/serine-rich 10 O...    33   0.69 
sp|P62995|TRA2B_HUMAN Splicing factor, arginine/serine-rich 10 O...    33   0.69 
sp|Q3ZBT6|TRA2B_BOVIN Splicing factor, arginine/serine-rich 10 O...    33   0.69 
sp|Q924M5|BOLL_MOUSE Protein boule-like OS=Mus musculus GN=Boll ...    33   0.69 
sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic O...    32   0.72 
sp|Q9BY77|PDIP3_HUMAN Polymerase delta-interacting protein 3 OS=...    26   1.2  
sp|Q9P3U1|YKX5_SCHPO Uncharacterized RNA-binding protein C328.05...    33   1.2  
sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic O...    33   1.2  
sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic OS=...    33   1.2  
sp|Q0U6E7|EIF3G_PHANO Eukaryotic translation initiation factor 3...    33   1.2  
sp|Q5AI15|PABP_CANAL Polyadenylate-binding protein, cytoplasmic ...    28   1.4  
sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic OS=...    32   1.5  

>sp|Q9JJW6|REFP2_MOUSE RNA and export factor-binding protein 2
           OS=Mus musculus GN=Refbp2 PE=1 SV=1
          Length = 218

 Score = 55.1 bits (131), Expect(2) = 9e-18
 Identities = 35/116 (30%), Positives = 48/116 (41%)
 Frame = +3

Query: 54  MTSALDMALDDLIKTNKQXXXXXXXXXXXXXXXXXXXXXXXXPIRKNXXXXXXXXXXXXX 233
           M   +DM+LDD+IK N+                           R+N             
Sbjct: 1   MADKMDMSLDDIIKLNRNQRRVNRGGGP----------------RRNRPAIARGGRNRPA 44

Query: 234 XXXAQRAPEGQWDHDLYEEGASVAPLRPNTGIETGTKLFISNLDFGVSNEDIKELF 401
                +    +W HDL++ G          G+ETG KL +SNLDFGVS+ DI+ELF
Sbjct: 45  PYSRPKPLPDKWQHDLFDSGCG-----GGEGVETGAKLLVSNLDFGVSDADIQELF 95



 Score = 55.1 bits (131), Expect(2) = 9e-18
 Identities = 26/53 (49%), Positives = 37/53 (69%)
 Frame = +1

Query: 388 LRSFFSEIGDIKRSTVHYDRSGRSKGTAEVVYSRRADAVAASKRTITCQLDGK 546
           ++  F+E G +K++ V YDRSGRS GTA+V + RRADA+ A K+     LDG+
Sbjct: 91  IQELFAEFGTLKKAAVDYDRSGRSLGTADVHFERRADALKAMKQYKGVPLDGR 143


>sp|Q86V81|THOC4_HUMAN THO complex subunit 4 OS=Homo sapiens
           GN=THOC4 PE=1 SV=3
          Length = 257

 Score = 57.4 bits (137), Expect(2) = 2e-17
 Identities = 26/53 (49%), Positives = 38/53 (71%)
 Frame = +1

Query: 388 LRSFFSEIGDIKRSTVHYDRSGRSKGTAEVVYSRRADAVAASKRTITCQLDGK 546
           ++  F+E G +K++ VHYDRSGRS GTA+V + R+ADA+ A K+     LDG+
Sbjct: 122 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGR 174



 Score = 51.6 bits (122), Expect(2) = 2e-17
 Identities = 24/46 (52%), Positives = 31/46 (67%)
 Frame = +3

Query: 264 QWDHDLYEEGASVAPLRPNTGIETGTKLFISNLDFGVSNEDIKELF 401
           +W HDL++ G          G+ETG KL +SNLDFGVS+ DI+ELF
Sbjct: 86  KWQHDLFDSGFG-----GGAGVETGGKLLVSNLDFGVSDADIQELF 126


>sp|O08583|THOC4_MOUSE THO complex subunit 4 OS=Mus musculus
           GN=Thoc4 PE=1 SV=3
          Length = 255

 Score = 57.4 bits (137), Expect(2) = 2e-17
 Identities = 26/53 (49%), Positives = 38/53 (71%)
 Frame = +1

Query: 388 LRSFFSEIGDIKRSTVHYDRSGRSKGTAEVVYSRRADAVAASKRTITCQLDGK 546
           ++  F+E G +K++ VHYDRSGRS GTA+V + R+ADA+ A K+     LDG+
Sbjct: 121 IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGR 173



 Score = 51.6 bits (122), Expect(2) = 2e-17
 Identities = 24/46 (52%), Positives = 31/46 (67%)
 Frame = +3

Query: 264 QWDHDLYEEGASVAPLRPNTGIETGTKLFISNLDFGVSNEDIKELF 401
           +W HDL++ G          G+ETG KL +SNLDFGVS+ DI+ELF
Sbjct: 85  KWQHDLFDSGFG-----GGAGVETGGKLLVSNLDFGVSDADIQELF 125


>sp|Q9P2K5|MYEF2_HUMAN Myelin expression factor 2 OS=Homo sapiens
           GN=MYEF2 PE=1 SV=2
          Length = 600

 Score = 33.9 bits (76), Expect(2) = 0.003
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = +1

Query: 382 KILRSFFSEIGDIKRSTVHYDRSGRSKGTAEVVYSRRADAVAA 510
           K L+  FS  G +KR+ +  D+ G+S+G   V + +  +AV A
Sbjct: 247 KKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQA 289



 Score = 26.6 bits (57), Expect(2) = 0.003
 Identities = 10/22 (45%), Positives = 17/22 (77%)
 Frame = +3

Query: 336 GTKLFISNLDFGVSNEDIKELF 401
           G+ +F++NLDF V  + +KE+F
Sbjct: 232 GSTIFVANLDFKVGWKKLKEVF 253


>sp|Q8C854|MYEF2_MOUSE Myelin expression factor 2 OS=Mus musculus
           GN=Myef2 PE=1 SV=1
          Length = 591

 Score = 33.9 bits (76), Expect(2) = 0.003
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = +1

Query: 382 KILRSFFSEIGDIKRSTVHYDRSGRSKGTAEVVYSRRADAVAA 510
           K L+  FS  G +KR+ +  D+ G+S+G   V + +  +AV A
Sbjct: 238 KKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIEAVQA 280



 Score = 26.6 bits (57), Expect(2) = 0.003
 Identities = 10/22 (45%), Positives = 17/22 (77%)
 Frame = +3

Query: 336 GTKLFISNLDFGVSNEDIKELF 401
           G+ +F++NLDF V  + +KE+F
Sbjct: 223 GSTIFVANLDFKVGWKKLKEVF 244


>sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic
           OS=Arabidopsis thaliana GN=RBP29 PE=1 SV=2
          Length = 342

 Score = 30.8 bits (68), Expect(2) = 0.009
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +3

Query: 270 DHDLYEEGASVAPLRPNTGIETGTKLFISNLDFGVSNEDIKELF 401
           + D++ +G   AP+  N+      KLF+ NL F V +  + +LF
Sbjct: 77  EDDMFADGDDSAPVERNS-FSPDLKLFVGNLSFNVDSAQLAQLF 119



 Score = 28.1 bits (61), Expect(2) = 0.009
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = +1

Query: 388 LRSFFSEIGDIKRSTVHYDR-SGRSKGTAEVVYSRRADAVAASKRTITCQLDGK 546
           L   F   G+++   V YD+ +GRS+G   V  S  A+  AA+++    + +G+
Sbjct: 115 LAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGR 168



 Score = 30.8 bits (68), Expect = 4.5
 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +1

Query: 388 LRSFFSEIGDIKRSTVHYDR-SGRSKGTAEVVYSRRADAVAASKRTITCQLDGK 546
           L + F+E G +  + V YDR SGRSKG   V  S   +   A        LDG+
Sbjct: 273 LENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNGADLDGR 326


>sp|Q09330|MLO3_SCHPO mRNA export protein mlo3
           OS=Schizosaccharomyces pombe GN=mlo3 PE=1 SV=1
          Length = 199

 Score = 38.9 bits (89), Expect = 0.017
 Identities = 24/63 (38%), Positives = 35/63 (55%)
 Frame = +1

Query: 355 PTWILGYQMKILRSFFSEIGDIKRSTVHYDRSGRSKGTAEVVYSRRADAVAASKRTITCQ 534
           PT +   Q+K L  F   IG  KR ++ Y  +GRSKG A +++SR  DA  A ++     
Sbjct: 63  PTDVTEAQVKEL--FVKSIGPCKRVSLAYGPNGRSKGIATIIFSRPGDATRAYEQYEGRL 120

Query: 535 LDG 543
           +DG
Sbjct: 121 VDG 123


>sp|Q05196|PABP5_ARATH Polyadenylate-binding protein 5
           OS=Arabidopsis thaliana GN=PAB5 PE=2 SV=2
          Length = 668

 Score = 29.3 bits (64), Expect(2) = 0.042
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +1

Query: 388 LRSFFSEIGDIKRSTVHYDRSGRSKGTAEVVYSRRADAVAASK 516
           L+  FSE G++    V  +  G S+G   V YS   +A+ A K
Sbjct: 344 LKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLAMK 386



 Score = 27.3 bits (59), Expect(2) = 0.042
 Identities = 10/22 (45%), Positives = 17/22 (77%)
 Frame = +3

Query: 336 GTKLFISNLDFGVSNEDIKELF 401
           G+ L++ NLD  V++E +KE+F
Sbjct: 327 GSNLYLKNLDDSVNDEKLKEMF 348


>sp|O64380|PABP3_ARATH Polyadenylate-binding protein 3
           OS=Arabidopsis thaliana GN=PAB3 PE=2 SV=1
          Length = 660

 Score = 29.6 bits (65), Expect(2) = 0.054
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +1

Query: 388 LRSFFSEIGDIKRSTVHYDRSGRSKGTAEVVYSRRADAVAA 510
           L+  FSE G++  S V  +  G S+G   V YS   +A+ A
Sbjct: 348 LKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRA 388



 Score = 26.6 bits (57), Expect(2) = 0.054
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 336 GTKLFISNLDFGVSNEDIKELF 401
           G  L++ NLD  V +E +KE+F
Sbjct: 331 GANLYLKNLDDSVDDEKLKEMF 352



 Score = 27.3 bits (59), Expect(2) = 1.4
 Identities = 17/43 (39%), Positives = 20/43 (46%)
 Frame = +1

Query: 382 KILRSFFSEIGDIKRSTVHYDRSGRSKGTAEVVYSRRADAVAA 510
           K L   FS  G I    V  D +GRSKG   V + +   A AA
Sbjct: 150 KALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQAA 192



 Score = 23.9 bits (50), Expect(2) = 1.4
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 315 PNTGIETGTKLFISNLDFGVSNEDIKELF 401
           P+T +     +FI NLD  + N+ + E F
Sbjct: 128 PSTRLSGKGNIFIKNLDASIDNKALFETF 156


>sp|Q9ZUU4|ROC1_ARATH Putative ribonucleoprotein At2g37220,
           chloroplastic OS=Arabidopsis thaliana GN=At2g37220 PE=1
           SV=1
          Length = 289

 Score = 29.3 bits (64), Expect(2) = 0.073
 Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = +1

Query: 388 LRSFFSEIGDIKRSTVHYDR-SGRSKGTAEVVYSRRADAVAASKRTITCQLDGK 546
           L   F   G+++   V YD+ +GRS+G   V  S  ++  AA+++    +LDG+
Sbjct: 107 LAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGR 160



 Score = 26.6 bits (57), Expect(2) = 0.073
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +3

Query: 270 DHDLYEEG-ASVAPLRPNTGIETGTKLFISNLDFGVSNEDIKELF 401
           + ++ E+G A VAP +  +      KLF+ NL F V +  + +LF
Sbjct: 68  EFEVEEDGFADVAPPKEQS-FSADLKLFVGNLPFNVDSAQLAQLF 111



 Score = 36.2 bits (82), Expect = 0.11
 Identities = 23/54 (42%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +1

Query: 388 LRSFFSEIGDIKRSTVHYDR-SGRSKGTAEVVYSRRADAVAASKRTITCQLDGK 546
           L S FSE G +  + V YDR SGRSKG   V Y    +   A K      LDG+
Sbjct: 220 LESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDGR 273
tr_hit_id A9RE63
Definition tr|A9RE63|A9RE63_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 119
Score (bit) 75.5
E-value 1.0e-27
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK957023|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0027_E10, 5'
         (546 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RE63|A9RE63_PHYPA Predicted protein OS=Physcomitrella paten...    75   1e-27
tr|A9S944|A9S944_PHYPA Predicted protein OS=Physcomitrella paten...    70   3e-25
tr|B6T346|B6T346_MAIZE Putative uncharacterized protein OS=Zea m...    72   6e-24
tr|A9SGU2|A9SGU2_PHYPA Predicted protein OS=Physcomitrella paten...    71   2e-23
tr|A9TZS6|A9TZS6_PHYPA Predicted protein OS=Physcomitrella paten...    69   1e-22
tr|A5ATR5|A5ATR5_VITVI Putative uncharacterized protein OS=Vitis...    68   1e-21
tr|Q2QZ01|Q2QZ01_ORYSJ Os12g0100100 protein OS=Oryza sativa subs...    75   6e-21
tr|A3C7R2|A3C7R2_ORYSJ Putative uncharacterized protein OS=Oryza...    75   6e-21
tr|B8AJ04|B8AJ04_ORYSI Putative uncharacterized protein OS=Oryza...    74   6e-20
tr|Q2RBS3|Q2RBS3_ORYSJ RNA recognition motif family protein, exp...    74   6e-20
tr|B8AJ06|B8AJ06_ORYSI Putative uncharacterized protein OS=Oryza...    74   6e-20
tr|Q0IVA9|Q0IVA9_ORYSJ Os11g0100200 protein OS=Oryza sativa subs...    74   6e-20
tr|A3C7Q7|A3C7Q7_ORYSJ Putative uncharacterized protein OS=Oryza...    74   6e-20
tr|Q9LF76|Q9LF76_ARATH DIP2 protein OS=Arabidopsis thaliana GN=d...    62   1e-18
tr|Q6NQ72|Q6NQ72_ARATH At5g37720 (Putative uncharacterized prote...    62   1e-18
tr|A8MQ78|A8MQ78_ARATH Uncharacterized protein At5g37720.2 OS=Ar...    62   1e-18
tr|B6L0D9|B6L0D9_BRAFL Putative uncharacterized protein OS=Branc...    61   3e-18
tr|B3RQ16|B3RQ16_TRIAD Putative uncharacterized protein OS=Trich...    62   4e-18
tr|B6P297|B6P297_BRAFL Putative uncharacterized protein OS=Branc...    61   7e-18
tr|A7PIY8|A7PIY8_VITVI Chromosome chr13 scaffold_17, whole genom...    65   4e-17
tr|B5FXP6|B5FXP6_TAEGU Putative disulfide-isomerase OS=Taeniopyg...    57   1e-16
tr|B5FXP4|B5FXP4_TAEGU Putative disulfide-isomerase OS=Taeniopyg...    57   1e-16
tr|B5FXN8|B5FXN8_TAEGU Putative disulfide-isomerase OS=Taeniopyg...    57   1e-16
tr|Q4KL64|Q4KL64_MOUSE RNA and export factor binding protein 2 O...    55   1e-16
tr|Q9FHP9|Q9FHP9_ARATH Genomic DNA, chromosome 5, TAC clone:K12B...    62   1e-16
tr|B5XE82|B5XE82_SALSA THO complex subunit 4 OS=Salmo salar GN=T...    60   1e-16
tr|B5XA68|B5XA68_SALSA THO complex subunit 4 OS=Salmo salar GN=T...    57   1e-16
tr|Q6GLW1|Q6GLW1_XENLA MGC84169 protein OS=Xenopus laevis GN=MGC...    58   2e-16
tr|Q4S9L1|Q4S9L1_TETNG Chromosome undetermined SCAF14696, whole ...    56   2e-16
tr|Q28FB9|Q28FB9_XENTR THO complex 4 (Putative uncharacterized p...    57   2e-16

>tr|A9RE63|A9RE63_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_112481 PE=4 SV=1
          Length = 249

 Score = 75.5 bits (184), Expect(2) = 1e-27
 Identities = 48/119 (40%), Positives = 56/119 (47%), Gaps = 3/119 (2%)
 Frame = +3

Query: 54  MTSALDMALDDLIKTNKQXXXXXXXXXXXXXXXXXXXXXXXXPIRKNXXXXXXXXXXXXX 233
           MTSALDM+LDDLIKTNK                            +              
Sbjct: 1   MTSALDMSLDDLIKTNKTATRGGRGGGGGGGGGGG----------RGAAPASRRGGATAA 50

Query: 234 XXXAQRAPEGQWDHDLYEEGASVAPLRPNT---GIETGTKLFISNLDFGVSNEDIKELF 401
               +R P+  W HD+YE     AP        GIETGTKL+ISNLD+GVSN+DIKELF
Sbjct: 51  ADGVRRDPDSTWQHDMYENFLPAAPSSGRGVTGGIETGTKLYISNLDYGVSNDDIKELF 109



 Score = 71.6 bits (174), Expect(2) = 1e-27
 Identities = 32/53 (60%), Positives = 43/53 (81%)
 Frame = +1

Query: 388 LRSFFSEIGDIKRSTVHYDRSGRSKGTAEVVYSRRADAVAASKRTITCQLDGK 546
           ++  F E+GD+KR +++YDRSGRSKGTAEVV++R+ DAV+A KR    QLDGK
Sbjct: 105 IKELFGEVGDLKRCSINYDRSGRSKGTAEVVFTRKPDAVSAMKRYNNVQLDGK 157


>tr|A9S944|A9S944_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_57202 PE=4 SV=1
          Length = 274

 Score = 69.7 bits (169), Expect(2) = 3e-25
 Identities = 49/122 (40%), Positives = 58/122 (47%), Gaps = 6/122 (4%)
 Frame = +3

Query: 54  MTSALDMALDDLIKTNKQXXXXXXXXXXXXXXXXXXXXXXXXPIRKNXXXXXXXXXXXXX 233
           MTSALDM+LDDLIK+NK                            +              
Sbjct: 1   MTSALDMSLDDLIKSNKTATHGGRGGGRGAAAPVPRRVGATAAAEEGYPDSRMSGPARRQ 60

Query: 234 XXXA---QRAPEGQWDHDLYEEGASV--APLRPNTG-IETGTKLFISNLDFGVSNEDIKE 395
              A   +RA +  W HD+YE  A    A +R   G IETGTKL+ISNLD GVSN+DIKE
Sbjct: 61  VTRATPVRRAMDSPWQHDMYENFAPAPSASVRGTGGNIETGTKLYISNLDHGVSNDDIKE 120

Query: 396 LF 401
           LF
Sbjct: 121 LF 122



 Score = 69.3 bits (168), Expect(2) = 3e-25
 Identities = 31/53 (58%), Positives = 42/53 (79%)
 Frame = +1

Query: 388 LRSFFSEIGDIKRSTVHYDRSGRSKGTAEVVYSRRADAVAASKRTITCQLDGK 546
           ++  F E+GD+KR +++YDRSGRSKGTAEVV++R+ DAV A +R    QLDGK
Sbjct: 118 IKELFGEVGDLKRCSINYDRSGRSKGTAEVVFTRKPDAVNAMRRYNNVQLDGK 170


>tr|B6T346|B6T346_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 253

 Score = 72.4 bits (176), Expect(2) = 6e-24
 Identities = 34/53 (64%), Positives = 44/53 (83%)
 Frame = +1

Query: 388 LRSFFSEIGDIKRSTVHYDRSGRSKGTAEVVYSRRADAVAASKRTITCQLDGK 546
           ++  FSE+GD+KR ++ YDRSGRSKGTAEVV++RR+DAVAA K+    QLDGK
Sbjct: 110 IKELFSELGDLKRFSIIYDRSGRSKGTAEVVFARRSDAVAAVKKYNNVQLDGK 162



 Score = 62.0 bits (149), Expect(2) = 6e-24
 Identities = 42/118 (35%), Positives = 54/118 (45%), Gaps = 2/118 (1%)
 Frame = +3

Query: 54  MTSALDMALDDLIKTNKQXXXXXXXXXXXXXXXXXXXXXXXX-PIRKNXXXXXXXXXXXX 230
           M   LDM LDD+IK NK+                         P R++            
Sbjct: 1   MAETLDMTLDDIIKNNKKSNPSSGGARRSRGGSAPGGGSGGVGPTRRSFKRAGNRQAPYQ 60

Query: 231 XXXXAQRAPEGQWDHDLYEEGASVAPLRPN-TGIETGTKLFISNLDFGVSNEDIKELF 401
                 +AP+  W HD+Y   A+        + +ETGTKL+ISNLDFGVSN+DIKELF
Sbjct: 61  PP----KAPDAAWQHDMYPAVAAGGGGGGRVSALETGTKLYISNLDFGVSNDDIKELF 114


>tr|A9SGU2|A9SGU2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_129553 PE=4 SV=1
          Length = 239

 Score = 70.9 bits (172), Expect(2) = 2e-23
 Identities = 32/53 (60%), Positives = 43/53 (81%)
 Frame = +1

Query: 388 LRSFFSEIGDIKRSTVHYDRSGRSKGTAEVVYSRRADAVAASKRTITCQLDGK 546
           ++  FSE+GD+KR +++YDRSGRSKGTAEVV+ R+ DA++A KR    QLDGK
Sbjct: 106 IKELFSEVGDLKRCSINYDRSGRSKGTAEVVFIRKPDALSAMKRYNNVQLDGK 158



 Score = 62.0 bits (149), Expect(2) = 2e-23
 Identities = 47/117 (40%), Positives = 56/117 (47%), Gaps = 1/117 (0%)
 Frame = +3

Query: 54  MTSALDMALDDLIKTNKQXXXXXXXXXXXXXXXXXXXXXXXXPIRKNXXXXXXXXXXXXX 233
           MTSALDM+LDDLIKTNK+                        P R+              
Sbjct: 1   MTSALDMSLDDLIKTNKRATAAAGAAVGYPGGKTSG------PARRQVGRAVARPTPYAS 54

Query: 234 XXXAQRAPEGQWDHDLYEEGASVAPLRP-NTGIETGTKLFISNLDFGVSNEDIKELF 401
              ++ A      H LY +    A  R    GIETGTKL+ISNLD+GVSN+DIKELF
Sbjct: 55  AKASKAASPYSLIH-LYADNFLPAGGRGMGKGIETGTKLYISNLDYGVSNDDIKELF 110


>tr|A9TZS6|A9TZS6_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_172894 PE=4 SV=1
          Length = 265

 Score = 68.9 bits (167), Expect(2) = 1e-22
 Identities = 32/53 (60%), Positives = 42/53 (79%)
 Frame = +1

Query: 388 LRSFFSEIGDIKRSTVHYDRSGRSKGTAEVVYSRRADAVAASKRTITCQLDGK 546
           ++  FSEIGD++R +++YDRSGRSKGTAEVV+ R+ DA+ A KR    QLDGK
Sbjct: 107 IKELFSEIGDLRRCSINYDRSGRSKGTAEVVFMRKPDALNAVKRYNNVQLDGK 159



 Score = 60.8 bits (146), Expect(2) = 1e-22
 Identities = 44/116 (37%), Positives = 51/116 (43%)
 Frame = +3

Query: 54  MTSALDMALDDLIKTNKQXXXXXXXXXXXXXXXXXXXXXXXXPIRKNXXXXXXXXXXXXX 233
           MTSALDM+LDDLIKTNK                                           
Sbjct: 1   MTSALDMSLDDLIKTNKSATRGGRGGGGGRGTGSAPQRGRATIAAGTAGGYSGGKISEER 60

Query: 234 XXXAQRAPEGQWDHDLYEEGASVAPLRPNTGIETGTKLFISNLDFGVSNEDIKELF 401
              AQ +     +H +   G  V       GIETGTKL+ISNLD+GVSN+DIKELF
Sbjct: 61  VRQAQDSAFQYTNHFIPAVGRGVGG-----GIETGTKLYISNLDYGVSNDDIKELF 111


>tr|A5ATR5|A5ATR5_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_029873 PE=4 SV=1
          Length = 348

 Score = 68.2 bits (165), Expect(2) = 1e-21
 Identities = 33/53 (62%), Positives = 40/53 (75%)
 Frame = +1

Query: 388 LRSFFSEIGDIKRSTVHYDRSGRSKGTAEVVYSRRADAVAASKRTITCQLDGK 546
           +R  FSEIGDIKR  VHY+++GR  G+AEVVY+RR+DA AA KR     LDGK
Sbjct: 141 IRELFSEIGDIKRYAVHYEKNGRPSGSAEVVYTRRSDAFAAVKRYNNVLLDGK 193



 Score = 58.5 bits (140), Expect(2) = 1e-21
 Identities = 27/45 (60%), Positives = 34/45 (75%)
 Frame = +3

Query: 267 WDHDLYEEGASVAPLRPNTGIETGTKLFISNLDFGVSNEDIKELF 401
           W HDL+E+    A L    G+E GTKL+ISNLD+GV+NEDI+ELF
Sbjct: 104 WQHDLFEDSLRAAGL---PGLEAGTKLYISNLDYGVTNEDIRELF 145


>tr|Q2QZ01|Q2QZ01_ORYSJ Os12g0100100 protein OS=Oryza sativa subsp.
           japonica GN=Os12g0100100 PE=2 SV=1
          Length = 228

 Score = 74.7 bits (182), Expect(2) = 6e-21
 Identities = 34/53 (64%), Positives = 45/53 (84%)
 Frame = +1

Query: 388 LRSFFSEIGDIKRSTVHYDRSGRSKGTAEVVYSRRADAVAASKRTITCQLDGK 546
           ++  FSE+GD+KR +++YDRSGRSKGTAEVV+SR++DA+AA KR    QLDGK
Sbjct: 88  IKELFSEVGDVKRYSINYDRSGRSKGTAEVVFSRKSDALAAVKRYNNVQLDGK 140



 Score = 49.7 bits (117), Expect(2) = 6e-21
 Identities = 22/29 (75%), Positives = 25/29 (86%)
 Frame = +3

Query: 315 PNTGIETGTKLFISNLDFGVSNEDIKELF 401
           P   +ETGTKL+ISNLD+ VSNEDIKELF
Sbjct: 64  PAANVETGTKLYISNLDYAVSNEDIKELF 92


>tr|A3C7R2|A3C7R2_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_031334 PE=4 SV=1
          Length = 177

 Score = 74.7 bits (182), Expect(2) = 6e-21
 Identities = 34/53 (64%), Positives = 45/53 (84%)
 Frame = +1

Query: 388 LRSFFSEIGDIKRSTVHYDRSGRSKGTAEVVYSRRADAVAASKRTITCQLDGK 546
           ++  FSE+GD+KR +++YDRSGRSKGTAEVV+SR++DA+AA KR    QLDGK
Sbjct: 88  IKELFSEVGDVKRYSINYDRSGRSKGTAEVVFSRKSDALAAVKRYNNVQLDGK 140



 Score = 49.7 bits (117), Expect(2) = 6e-21
 Identities = 22/29 (75%), Positives = 25/29 (86%)
 Frame = +3

Query: 315 PNTGIETGTKLFISNLDFGVSNEDIKELF 401
           P   +ETGTKL+ISNLD+ VSNEDIKELF
Sbjct: 64  PAANVETGTKLYISNLDYAVSNEDIKELF 92


>tr|B8AJ04|B8AJ04_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_07506 PE=4 SV=1
          Length = 226

 Score = 73.6 bits (179), Expect(2) = 6e-20
 Identities = 33/53 (62%), Positives = 45/53 (84%)
 Frame = +1

Query: 388 LRSFFSEIGDIKRSTVHYDRSGRSKGTAEVVYSRRADAVAASKRTITCQLDGK 546
           ++  FSE+GD+KR +++YD+SGRSKGTAEVV+SR++DA+AA KR    QLDGK
Sbjct: 84  IKELFSEVGDVKRYSINYDKSGRSKGTAEVVFSRKSDALAAVKRYNNVQLDGK 136



 Score = 47.4 bits (111), Expect(2) = 6e-20
 Identities = 22/27 (81%), Positives = 24/27 (88%)
 Frame = +3

Query: 321 TGIETGTKLFISNLDFGVSNEDIKELF 401
           T +ETGTKL ISNLD+ VSNEDIKELF
Sbjct: 62  TPVETGTKLHISNLDYAVSNEDIKELF 88


>tr|Q2RBS3|Q2RBS3_ORYSJ RNA recognition motif family protein,
           expressed OS=Oryza sativa subsp. japonica
           GN=LOC_Os11g01020 PE=4 SV=1
          Length = 224

 Score = 73.6 bits (179), Expect(2) = 6e-20
 Identities = 33/53 (62%), Positives = 45/53 (84%)
 Frame = +1

Query: 388 LRSFFSEIGDIKRSTVHYDRSGRSKGTAEVVYSRRADAVAASKRTITCQLDGK 546
           ++  FSE+GD+KR +++YD+SGRSKGTAEVV+SR++DA+AA KR    QLDGK
Sbjct: 84  IKELFSEVGDVKRYSINYDKSGRSKGTAEVVFSRKSDALAAVKRYNNVQLDGK 136



 Score = 47.4 bits (111), Expect(2) = 6e-20
 Identities = 22/27 (81%), Positives = 24/27 (88%)
 Frame = +3

Query: 321 TGIETGTKLFISNLDFGVSNEDIKELF 401
           T +ETGTKL ISNLD+ VSNEDIKELF
Sbjct: 62  TPVETGTKLHISNLDYAVSNEDIKELF 88