| DK957038 |
| Clone id |
TST39A01NGRL0027_F01 |
| Library |
TST39 |
| Length |
634 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0027_F01. 5' end sequence. |
| Accession |
DK957038 |
| Tissue type |
prothallia with plantlets |
| Developmental stage |
gametophytes with sporophytes |
| Contig ID |
CL998Contig1 |
| Sequence |
CGTGGAGACAGAGAGAGAGTGAGCACTGACTACTCTGAGAAAAACGAAGACTTTTTGAGG TTCACTTACATTCGTGCAGCAGGGAAACTTGGAGCTCTGGCGATGCAGCGGGTGCTAGGC ATGGAGTGGGGGCATGCGCTGCTGGGTCTCCTTTGTATGGTGGCAGTATGTGTCGAGATG TGCGATGCGGCTGCGGTGGTGGATGTGTACCGCATGATACAGTACGACTTGCAAGGCGTA CCTTTTGGCTCTCGCCGTGCCGCCCTCAACCACCACGCCTCTTCTCTCCTGCTCTATTCA AATGTCAATCACTCCTCGGATCTCTCCCGCTCTGTTATCATCGTTCCTATTGCCAGAGCT AGCTTCTCCATTCTTACGGATTTGCTACGAAGCAAACAAGTTATAGGTGGTCTCTTGCTG CTGCTTCCTTCCAAGTTCACAACTCAATGTAGTGCAGATGATGCAGCTGATTCCGAAGAT GCAGATGCAGATGTATTTGAAGAAATTTCAGAGCTTGAGCGCTCGCTTATACACAGTAGC TTACCTTATCCTGTCTATTTTGCCTTTGAGAATGAGAAATTGATGTCTCTTTTACAAGAG GTGGAAGAGAATGATGCTGCAGGAAGGCACGCTA |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q6NZ07 |
| Definition |
sp|Q6NZ07|NCLN_DANRE Nicalin-1 OS=Danio rerio |
| Align length |
153 |
| Score (bit) |
59.3 |
| E-value |
2.0e-08 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
Q9M292 |
| Definition |
tr|Q9M292|Q9M292_ARATH Putative uncharacterized protein T22K7_10 (Putative uncharacterized protein At3g44330) OS=Arabidopsis thaliana |
| Align length |
175 |
| Score (bit) |
129.0 |
| E-value |
2.0e-28 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957038|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0027_F01, 5' (634 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9M292|Q9M292_ARATH Putative uncharacterized protein T22K7_10... 129 2e-28 tr|Q8GUI0|Q8GUI0_ARATH Putative uncharacterized protein At3g4433... 129 2e-28 tr|A7QF73|A7QF73_VITVI Chromosome undetermined scaffold_87, whol... 124 4e-27 tr|A9TZT1|A9TZT1_PHYPA Predicted protein OS=Physcomitrella paten... 115 2e-24 tr|B1Q4T6|B1Q4T6_9ROSI Putative uncharacterized protein OS=Brugu... 112 2e-23 tr|Q6Z1Y4|Q6Z1Y4_ORYSJ Os08g0102100 protein OS=Oryza sativa subs... 103 7e-21 tr|A3BNT3|A3BNT3_ORYSJ Putative uncharacterized protein OS=Oryza... 103 7e-21 tr|B4FZF8|B4FZF8_MAIZE Nicalin OS=Zea mays PE=2 SV=1 94 9e-18 tr|B8A2Z5|B8A2Z5_MAIZE Putative uncharacterized protein OS=Zea m... 93 2e-17 tr|B6TVH8|B6TVH8_MAIZE Nicalin OS=Zea mays PE=2 SV=1 84 9e-15 tr|A5AHR2|A5AHR2_VITVI Putative uncharacterized protein OS=Vitis... 69 3e-10 tr|Q1LW20|Q1LW20_DANRE Nicalin OS=Danio rerio GN=ncl1 PE=2 SV=1 59 2e-07 tr|B8B9Y0|B8B9Y0_ORYSI Putative uncharacterized protein OS=Oryza... 59 3e-07 tr|B7Q8G8|B7Q8G8_IXOSC Nicalin-1, putative (Fragment) OS=Ixodes ... 57 1e-06 tr|B3RSM7|B3RSM7_TRIAD Putative uncharacterized protein OS=Trich... 54 8e-06 tr|B2RA56|B2RA56_HUMAN cDNA, FLJ94705, highly similar to Homo sa... 54 8e-06 tr|Q1LZC3|Q1LZC3_BOVIN Nicalin homolog (Zebrafish) OS=Bos taurus... 52 2e-05 tr|Q4RUB4|Q4RUB4_TETNG Chromosome 1 SCAF14995, whole genome shot... 50 1e-04 tr|B6MLR6|B6MLR6_BRAFL Putative uncharacterized protein OS=Branc... 49 3e-04 tr|B6MLQ6|B6MLQ6_BRAFL Putative uncharacterized protein OS=Branc... 48 4e-04 tr|Q6GQK1|Q6GQK1_XENLA MGC79091 protein OS=Xenopus laevis GN=MGC... 47 0.001 tr|Q5BJ70|Q5BJ70_XENTR Nicalin OS=Xenopus tropicalis GN=ncln PE=... 47 0.001 tr|Q5C122|Q5C122_SCHJA SJCHGC04392 protein (Fragment) OS=Schisto... 46 0.002 tr|Q7ZX90|Q7ZX90_XENLA Ncln protein OS=Xenopus laevis GN=ncln PE... 44 0.008 tr|B4JP28|B4JP28_DROGR GH13015 OS=Drosophila grimshawi GN=GH1301... 42 0.031 tr|A7SNU3|A7SNU3_NEMVE Predicted protein OS=Nematostella vectens... 42 0.041 tr|B4NZ96|B4NZ96_DROYA GE18920 OS=Drosophila yakuba GN=GE18920 P... 41 0.053 tr|B3N971|B3N971_DROER GG10105 OS=Drosophila erecta GN=GG10105 P... 41 0.053 tr|B4VFD4|B4VFD4_9ACTO Integral membrane protein OS=Streptomyces... 40 0.090 tr|Q177H2|Q177H2_AEDAE Putative uncharacterized protein OS=Aedes... 39 0.26
>tr|Q9M292|Q9M292_ARATH Putative uncharacterized protein T22K7_10 (Putative uncharacterized protein At3g44330) OS=Arabidopsis thaliana GN=T22K7_10 PE=2 SV=1 Length = 565
Score = 129 bits (323), Expect = 2e-28 Identities = 69/175 (39%), Positives = 102/175 (58%) Frame = +1
Query: 109 RVLGMEWGHALLGLLCMVAVCVEMCDAAAVVDVYRMIQYDLQGVPFGSRRXXXXXXXXXX 288 RV+ E + +L L+ ++ CVE+CDAA VVDVYR+IQYD+ GVPFGSR Sbjct: 12 RVMVFESMYPILALMLILVACVELCDAATVVDVYRLIQYDISGVPFGSR----FSSLNHH 67
Query: 289 XXXXXVNHSSDLSRSVIIVPIARASFSILTDLLRSKQVIGGLLLLLPSKFTTQCXXXXXX 468 +DLSRSV+I+P+ + + D + KQ +GGLL+LLP F + Sbjct: 68 AASLSFQRGADLSRSVLILPLRELDIAFVQDYISQKQSLGGLLILLPQTF--RPGNVGGG 125
Query: 469 XXXXXXXXVFEEISELERSLIHSSLPYPVYFAFENEKLMSLLQEVEENDAAGRHA 633 + +LE+ L+H ++P+PVYFAFENE+ ++L +V++NDA G+ A Sbjct: 126 SLSSENDGFRSLLGQLEKLLVHGNIPFPVYFAFENEETDAMLADVKKNDALGQQA 180
>tr|Q8GUI0|Q8GUI0_ARATH Putative uncharacterized protein At3g44330 (At3g44330) OS=Arabidopsis thaliana GN=At3g44330 PE=2 SV=1 Length = 277
Score = 129 bits (323), Expect = 2e-28 Identities = 69/175 (39%), Positives = 102/175 (58%) Frame = +1
Query: 109 RVLGMEWGHALLGLLCMVAVCVEMCDAAAVVDVYRMIQYDLQGVPFGSRRXXXXXXXXXX 288 RV+ E + +L L+ ++ CVE+CDAA VVDVYR+IQYD+ GVPFGSR Sbjct: 12 RVMVFESMYPILALMLILVACVELCDAATVVDVYRLIQYDISGVPFGSR----FSSLNHH 67
Query: 289 XXXXXVNHSSDLSRSVIIVPIARASFSILTDLLRSKQVIGGLLLLLPSKFTTQCXXXXXX 468 +DLSRSV+I+P+ + + D + KQ +GGLL+LLP F + Sbjct: 68 AASLSFQRGADLSRSVLILPLRELDIAFVQDYISQKQSLGGLLILLPQTF--RPGNVGGG 125
Query: 469 XXXXXXXXVFEEISELERSLIHSSLPYPVYFAFENEKLMSLLQEVEENDAAGRHA 633 + +LE+ L+H ++P+PVYFAFENE+ ++L +V++NDA G+ A Sbjct: 126 SLSSENDGFRSLLGQLEKLLVHGNIPFPVYFAFENEETDAMLADVKKNDALGQQA 180
>tr|A7QF73|A7QF73_VITVI Chromosome undetermined scaffold_87, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00037308001 PE=4 SV=1 Length = 563
Score = 124 bits (312), Expect = 4e-27 Identities = 69/177 (38%), Positives = 104/177 (58%), Gaps = 6/177 (3%) Frame = +1
Query: 121 MEWGHALLGLLCMVAVCVEMCDAAAVVDVYRMIQYDLQGVPFGSRRXXXXXXXXXXXXXX 300 +E ++++ L+ ++ CVE+CDAA VVDVYR+IQYDL GVPFGSR Sbjct: 12 LESVYSVIALVFVLVACVELCDAATVVDVYRLIQYDLAGVPFGSRLANLNHHAASGFAP- 70
Query: 301 XVNHSSDLSRSVIIVPIARASFSILTDLLRSKQVIGGLLLLLPSKFTTQCXXXXXXXXXX 480 ++DLSR+V+IVP+ + + + D + KQ +GGLL LLP +++ Sbjct: 71 ----AADLSRTVVIVPVRDINITFIGDYITQKQPLGGLLFLLPRMISSE-----NRDDMG 121
Query: 481 XXXXVFEE------ISELERSLIHSSLPYPVYFAFENEKLMSLLQEVEENDAAGRHA 633 FEE + ELE+ LIH+S+PYPVYFAFE++ + +L +++ NDA + A Sbjct: 122 RGDQTFEEKLMRNMLGELEQLLIHASIPYPVYFAFEDDNIDDVLTDIKRNDATSQPA 178
>tr|A9TZT1|A9TZT1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_109086 PE=4 SV=1 Length = 554
Score = 115 bits (289), Expect = 2e-24 Identities = 69/168 (41%), Positives = 100/168 (59%) Frame = +1
Query: 130 GHALLGLLCMVAVCVEMCDAAAVVDVYRMIQYDLQGVPFGSRRXXXXXXXXXXXXXXXVN 309 G A++ L+ ++ V + DAAAVVDVYRMIQYDL+G P GSRR Sbjct: 11 GQAVVALMTVLMSMV-VADAAAVVDVYRMIQYDLKGNPMGSRRAALNHHTVSGFDV---- 65
Query: 310 HSSDLSRSVIIVPIARASFSILTDLLRSKQVIGGLLLLLPSKFTTQCXXXXXXXXXXXXX 489 +DLSR+V+I+P + + S L + +++K ++GGLLLLLP + Sbjct: 66 QGADLSRAVVILPALKVNISSLDEFVQNKGLLGGLLLLLPQR----SDETGGAEGDDSDE 121
Query: 490 XVFEEISELERSLIHSSLPYPVYFAFENEKLMSLLQEVEENDAAGRHA 633 V + ++ELE+ L+H++ YPVYFA+E+E L+ LL EV +DAAGR A Sbjct: 122 KVAKALAELEQWLVHNTFQYPVYFAYEDENLLKLLHEVAASDAAGRPA 169
>tr|B1Q4T6|B1Q4T6_9ROSI Putative uncharacterized protein OS=Bruguiera gymnorhiza PE=2 SV=1 Length = 567
Score = 112 bits (280), Expect = 2e-23 Identities = 61/165 (36%), Positives = 92/165 (55%), Gaps = 3/165 (1%) Frame = +1
Query: 148 LLCMVAVCVEMCDAAAVVDVYRMIQYDLQGVPFGSRRXXXXXXXXXXXXXXXVNHSSDLS 327 LL ++ CVE+CDAA VVDVYR+IQYD+ GVPFGSR +D+S Sbjct: 22 LLFILVACVELCDAATVVDVYRLIQYDISGVPFGSRLASLNHHAASLHFAP----GADVS 77
Query: 328 RSVIIVPIARASFSILTDLLRSKQVIGGLLLLLPSKFTTQCXXXXXXXXXXXXXX---VF 498 R+ +++P+ + + + + + + +G LL LLP F + Sbjct: 78 RAALMIPVREMNITFVREFITQGRPLGSLLFLLPQMFNFNNGDGDGMRSKYQVHDKEMMK 137
Query: 499 EEISELERSLIHSSLPYPVYFAFENEKLMSLLQEVEENDAAGRHA 633 ++ELER LIH+ +PYPVYFAFEN+ + ++L +V+ NDA G+ A Sbjct: 138 TLLAELERILIHAKIPYPVYFAFENDNIDAVLADVKRNDAIGQPA 182
>tr|Q6Z1Y4|Q6Z1Y4_ORYSJ Os08g0102100 protein OS=Oryza sativa subsp. japonica GN=B1147B12.25 PE=2 SV=1 Length = 555
Score = 103 bits (258), Expect = 7e-21 Identities = 59/164 (35%), Positives = 90/164 (54%) Frame = +1
Query: 142 LGLLCMVAVCVEMCDAAAVVDVYRMIQYDLQGVPFGSRRXXXXXXXXXXXXXXXVNHSSD 321 L +L ++ CVE+ DAAA V VYR+IQYDL G P GSR + ++D Sbjct: 18 LAVLLLLLACVELGDAAAAVGVYRLIQYDLAGAPLGSR----AAALNHHAAALPLPAAAD 73
Query: 322 LSRSVIIVPIARASFSILTDLLRSKQVIGGLLLLLPSKFTTQCXXXXXXXXXXXXXXVFE 501 LSRS ++ P+ + L D L K+ +GGLL+LLP K + V Sbjct: 74 LSRSALVAPLLDLPLAFLRDYLADKKYLGGLLILLPKKLNHE-------PNNEDKGQVKA 126
Query: 502 EISELERSLIHSSLPYPVYFAFENEKLMSLLQEVEENDAAGRHA 633 ++ELE+ L+H +PYPVYFAF+++ +LL ++ + ++G+ A Sbjct: 127 SLAELEQLLLHQQVPYPVYFAFQDDHFDNLLADIRKIASSGQPA 170
>tr|A3BNT3|A3BNT3_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_024705 PE=4 SV=1 Length = 562
Score = 103 bits (258), Expect = 7e-21 Identities = 59/164 (35%), Positives = 90/164 (54%) Frame = +1
Query: 142 LGLLCMVAVCVEMCDAAAVVDVYRMIQYDLQGVPFGSRRXXXXXXXXXXXXXXXVNHSSD 321 L +L ++ CVE+ DAAA V VYR+IQYDL G P GSR + ++D Sbjct: 18 LAVLLLLLACVELGDAAAAVGVYRLIQYDLAGAPLGSR----AAALNHHAAALPLPAAAD 73
Query: 322 LSRSVIIVPIARASFSILTDLLRSKQVIGGLLLLLPSKFTTQCXXXXXXXXXXXXXXVFE 501 LSRS ++ P+ + L D L K+ +GGLL+LLP K + V Sbjct: 74 LSRSALVAPLLDLPLAFLRDYLADKKYLGGLLILLPKKLNHE-------PNNEDKGQVKA 126
Query: 502 EISELERSLIHSSLPYPVYFAFENEKLMSLLQEVEENDAAGRHA 633 ++ELE+ L+H +PYPVYFAF+++ +LL ++ + ++G+ A Sbjct: 127 SLAELEQLLLHQQVPYPVYFAFQDDHFDNLLADIRKIASSGQPA 170
>tr|B4FZF8|B4FZF8_MAIZE Nicalin OS=Zea mays PE=2 SV=1 Length = 552
Score = 93.6 bits (231), Expect = 9e-18 Identities = 56/164 (34%), Positives = 85/164 (51%) Frame = +1
Query: 142 LGLLCMVAVCVEMCDAAAVVDVYRMIQYDLQGVPFGSRRXXXXXXXXXXXXXXXVNHSSD 321 L + + CVE+ DAAA V VYR+IQYDL G P GSR + +D Sbjct: 15 LAVAFVFLACVELGDAAAAVSVYRLIQYDLAGAPLGSR----AAVLNHHAAVLPLPAGAD 70
Query: 322 LSRSVIIVPIARASFSILTDLLRSKQVIGGLLLLLPSKFTTQCXXXXXXXXXXXXXXVFE 501 LSRS ++ P+ S L + L K+ +GGLL+LLP+ V Sbjct: 71 LSRSALVAPLLDLPLSFLREYLVEKKQLGGLLILLPTN-------QGDKDSADDKGQVKG 123
Query: 502 EISELERSLIHSSLPYPVYFAFENEKLMSLLQEVEENDAAGRHA 633 ++ELE+ L+H +PYPVYFA +++ +LL ++ + ++G+ A Sbjct: 124 VLTELEKLLVHEQVPYPVYFALDDDNFGNLLADIHKIASSGQPA 167
>tr|B8A2Z5|B8A2Z5_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 552
Score = 92.8 bits (229), Expect = 2e-17 Identities = 56/164 (34%), Positives = 85/164 (51%) Frame = +1
Query: 142 LGLLCMVAVCVEMCDAAAVVDVYRMIQYDLQGVPFGSRRXXXXXXXXXXXXXXXVNHSSD 321 L + + CVE+ DAAA V VYR+IQYDL G P GSR + +D Sbjct: 15 LAVAFVFLACVELGDAAAAVSVYRLIQYDLAGAPLGSR----AAVLNHHAAVLPLPAGAD 70
Query: 322 LSRSVIIVPIARASFSILTDLLRSKQVIGGLLLLLPSKFTTQCXXXXXXXXXXXXXXVFE 501 LSRS ++ P+ S L + L K+ +GGLL+LLP+ V Sbjct: 71 LSRSALVAPLLDLPLSFLREYLVEKKQLGGLLILLPTN-------QGDKDSADDKGQVKC 123
Query: 502 EISELERSLIHSSLPYPVYFAFENEKLMSLLQEVEENDAAGRHA 633 ++ELE+ L+H +PYPVYFA +++ +LL ++ + ++G+ A Sbjct: 124 VLTELEKLLVHEQVPYPVYFALDDDNFGNLLADIHKIASSGQPA 167
>tr|B6TVH8|B6TVH8_MAIZE Nicalin OS=Zea mays PE=2 SV=1 Length = 550
Score = 83.6 bits (205), Expect = 9e-15 Identities = 54/160 (33%), Positives = 81/160 (50%), Gaps = 1/160 (0%) Frame = +1
Query: 157 MVAVCVEMCDAAAV-VDVYRMIQYDLQGVPFGSRRXXXXXXXXXXXXXXXVNHSSDLSRS 333 ++ CVE+ DAAA V VYR+IQYDL G P GSR +DLSRS Sbjct: 20 VLLACVELGDAAAAAVGVYRLIQYDLAGAPLGSRAAVLNHHAAALPLPA----GADLSRS 75
Query: 334 VIIVPIARASFSILTDLLRSKQVIGGLLLLLPSKFTTQCXXXXXXXXXXXXXXVFEEISE 513 ++ P+ S L + L K+ +GGLL+LLP+ + ++E Sbjct: 76 ALVAPLLDLPLSFLREYLVEKKHLGGLLILLPTNNDSVDDKGQFKGV----------LTE 125
Query: 514 LERSLIHSSLPYPVYFAFENEKLMSLLQEVEENDAAGRHA 633 LE+ L+H + YPVYFA ++ L +LL ++ + + G+ A Sbjct: 126 LEKLLLHEQVSYPVYFALHDDNLDNLLADIHKIASTGQPA 165
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