NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK957039
Clone id TST39A01NGRL0027_F02
Library
Length 720
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0027_F02. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CACATTTGCGCTCGTGCGAACCATGGGTATTGACTTGCCTGCTGGTGGGCGCAACAAGAA
GACAAAGCGTACTGCACCTAAAAGTGACAATGTCTATTTGAAGCTTGTTGTGAAGCTATA
CAGGTTTTTGGTAAGGAGGACCGGCAGTCCTTTCAACGCAGTTGTCCTCAAGCGTTTGTT
CATGAGTAGAACCAATAGGCCCCCCCTTTCGTTATCTCGACTGACACGATATATGAAGGA
CAAGGAAGATAAAATTGGTGTGGTCGTTGGAACTGTGACGGATGATGTTAGACTGTATGA
GCTGCCTGCCTTGAAAATTGCTGCACTCCGATTCACAGAGACTGCCCGAGCTAGGATTTT
GAAAGCCGGGGGAGATTGCCTAACATTCGACCAACTTGCTTTAAAAGCACCAACCGGCTC
AAACACGGTGCTTTTAAGAGGACCCAAGAATGCTCGCGAAGCTGTGAAGCACTTCGGCAG
AGCTCCTGGTGTACCACACAGTCACACCAAGCCTTATGTCCGCTCCAAGGGTCGTAAGTT
TGAGAAGGCCCGTGGTCGTCGTAACAGCAGAGGGTACAAGGTCTAAATCTCTAATCATGT
CTACCTGCTAGAGTTCGAGAGGGTTTCCTCCGGTTGACTAGCTCCTTGGCTTTAGAACAC
CTGTTTTGGAACGGGAAATTTGTTTTTTCTAGCCAAAAAAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P42791
Definition sp|P42791|RL182_ARATH 60S ribosomal protein L18-2 OS=Arabidopsis thaliana
Align length 187
Score (bit) 282.0
E-value 1.0e-75
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK957039|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0027_F02, 5'
         (694 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P42791|RL182_ARATH 60S ribosomal protein L18-2 OS=Arabidopsis...   282   1e-75
sp|Q940B0|RL183_ARATH 60S ribosomal protein L18-3 OS=Arabidopsis...   279   1e-74
sp|O65729|RL18_CICAR 60S ribosomal protein L18 (Fragment) OS=Cic...   275   2e-73
sp|O22254|RL181_ARATH Putative 60S ribosomal protein L18-1 OS=Ar...   257   4e-68
sp|P12001|RL18_RAT 60S ribosomal protein L18 OS=Rattus norvegicu...   230   6e-60
sp|P35980|RL18_MOUSE 60S ribosomal protein L18 OS=Mus musculus G...   230   6e-60
sp|Q4R5H8|RL18_MACFA 60S ribosomal protein L18 OS=Macaca fascicu...   229   1e-59
sp|Q4PM04|RL18_IXOSC 60S ribosomal protein L18 OS=Ixodes scapula...   229   1e-59
sp|Q07020|RL18_HUMAN 60S ribosomal protein L18 OS=Homo sapiens G...   229   1e-59
sp|Q90YV0|RL18_ICTPU 60S ribosomal protein L18 OS=Ictalurus punc...   229   1e-59
sp|Q5E973|RL18_BOVIN 60S ribosomal protein L18 OS=Bos taurus GN=...   228   2e-59
sp|P69091|RL18_ORENI 60S ribosomal protein L18 OS=Oreochromis ni...   226   9e-59
sp|P69090|RL18_OREMO 60S ribosomal protein L18 OS=Oreochromis mo...   226   9e-59
sp|P02412|RL18B_XENLA 60S ribosomal protein L18-B OS=Xenopus lae...   226   9e-59
sp|Q4GXG7|RL18_TIMBA 60S ribosomal protein L18 OS=Timarcha balea...   226   1e-58
sp|P09897|RL18A_XENLA 60S ribosomal protein L18-A OS=Xenopus lae...   224   3e-58
sp|Q0PXY6|RL18_DIACI 60S ribosomal protein L18 OS=Diaphorina cit...   221   4e-57
sp|Q2M0G4|RL18_DROPS 60S ribosomal protein L18 OS=Drosophila pse...   220   6e-57
sp|Q9VS34|RL18_DROME 60S ribosomal protein L18 OS=Drosophila mel...   220   6e-57
sp|Q56FG8|RL18_LYSTE 60S ribosomal protein L18 OS=Lysiphlebus te...   219   8e-57
sp|Q60P81|RL18_CAEBR 60S ribosomal protein L18 OS=Caenorhabditis...   219   1e-56
sp|O45946|RL18_CAEEL 60S ribosomal protein L18 OS=Caenorhabditis...   218   2e-56
sp|Q7QJM5|RL18_ANOGA 60S ribosomal protein L18 OS=Anopheles gamb...   209   1e-53
sp|Q962Y8|RL18_SPOFR 60S ribosomal protein L18 OS=Spodoptera fru...   208   3e-53
sp|Q8TFH1|RL18B_SCHPO 60S ribosomal protein L18-B OS=Schizosacch...   207   3e-53
sp|Q10192|RL18A_SCHPO 60S ribosomal protein L18-A OS=Schizosacch...   207   3e-53
sp|Q1HR62|RL18_AEDAE 60S ribosomal protein L18 OS=Aedes aegypti ...   207   4e-53
sp|P07279|RL18_YEAST 60S ribosomal protein L18 OS=Saccharomyces ...   204   3e-52
sp|Q6F442|RL18_PLUXY 60S ribosomal protein L18 OS=Plutella xylos...   203   6e-52
sp|Q5UAS1|RL18_BOMMO 60S ribosomal protein L18 OS=Bombyx mori GN...   201   4e-51

>sp|P42791|RL182_ARATH 60S ribosomal protein L18-2 OS=Arabidopsis
           thaliana GN=RPL18B PE=2 SV=2
          Length = 187

 Score =  282 bits (721), Expect = 1e-75
 Identities = 139/187 (74%), Positives = 158/187 (84%)
 Frame = +2

Query: 23  MGIDLPAGGRNKKTKRTAPKSDNVYLKLVVKLYRFLVRRTGSPFNAVVLKRLFMSRTNRP 202
           MGIDL AGG++KKTKRTAPKSD+VYLKL VKLYRFLVRRT S FN V+LKRLFMS+ N+ 
Sbjct: 1   MGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNKA 60

Query: 203 PLSLSRLTRYMKDKEDKIXXXXXXXXXXXRLYELPALKIAALRFTETARARILKAGGDCL 382
           PLSLSRL  +M  KEDKI           R++E+PA+K+ ALRFTE ARARI KAGG+CL
Sbjct: 61  PLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 120

Query: 383 TFDQLALKAPTGSNTVLLRGPKNAREAVKHFGRAPGVPHSHTKPYVRSKGRKFEKARGRR 562
           TFDQLAL+AP G NTVLLRGPKN+REAVKHFG APGVPHSH+KPYVR+KGRKFEKARG+R
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKR 180

Query: 563 NSRGYKV 583
            SRG+KV
Sbjct: 181 KSRGFKV 187


>sp|Q940B0|RL183_ARATH 60S ribosomal protein L18-3 OS=Arabidopsis
           thaliana GN=RPL18C PE=2 SV=1
          Length = 187

 Score =  279 bits (713), Expect = 1e-74
 Identities = 138/187 (73%), Positives = 159/187 (85%)
 Frame = +2

Query: 23  MGIDLPAGGRNKKTKRTAPKSDNVYLKLVVKLYRFLVRRTGSPFNAVVLKRLFMSRTNRP 202
           MGIDL AGG++KKTKRTAPKSD+VYLKL+VKLYRFLVRR+ S FNAV+LKRLFMS+ N+ 
Sbjct: 1   MGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKA 60

Query: 203 PLSLSRLTRYMKDKEDKIXXXXXXXXXXXRLYELPALKIAALRFTETARARILKAGGDCL 382
           PLSLSRL  +M  K+DKI           R++E+PA+K+ ALRFTE ARARI KAGG+CL
Sbjct: 61  PLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 120

Query: 383 TFDQLALKAPTGSNTVLLRGPKNAREAVKHFGRAPGVPHSHTKPYVRSKGRKFEKARGRR 562
           TFDQLAL+AP G NTVLLRGPKN+REAVKHFG APGVPHS+TKPYVR KGRKFEKARG+R
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGKR 180

Query: 563 NSRGYKV 583
            SRG+KV
Sbjct: 181 KSRGFKV 187


>sp|O65729|RL18_CICAR 60S ribosomal protein L18 (Fragment) OS=Cicer
           arietinum GN=RPL18 PE=2 SV=1
          Length = 183

 Score =  275 bits (702), Expect = 2e-73
 Identities = 136/184 (73%), Positives = 158/184 (85%)
 Frame = +2

Query: 32  DLPAGGRNKKTKRTAPKSDNVYLKLVVKLYRFLVRRTGSPFNAVVLKRLFMSRTNRPPLS 211
           DL AGG+NKKTKRT+PKS+++YLKL+VKLYRFLVRRT S FNAV+LKRLFMS+ NRPPLS
Sbjct: 1   DLKAGGKNKKTKRTSPKSNDIYLKLLVKLYRFLVRRTDSNFNAVILKRLFMSKVNRPPLS 60

Query: 212 LSRLTRYMKDKEDKIXXXXXXXXXXXRLYELPALKIAALRFTETARARILKAGGDCLTFD 391
           LSRL +YM+ KE KI           R+Y++P +K+ AL+FTETARARI KAGG+CLTFD
Sbjct: 61  LSRLIKYMQGKEGKIGVVVGAVTDDIRVYDVPTIKVTALKFTETARARIQKAGGECLTFD 120

Query: 392 QLALKAPTGSNTVLLRGPKNAREAVKHFGRAPGVPHSHTKPYVRSKGRKFEKARGRRNSR 571
           QLAL+ P  ++TVLLRGPKNAREAVKHFG APGVPHSHTKPYVRSKGRKFEKARGRR SR
Sbjct: 121 QLALRLPL-TDTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRKSR 179

Query: 572 GYKV 583
           G++V
Sbjct: 180 GFRV 183


>sp|O22254|RL181_ARATH Putative 60S ribosomal protein L18-1
           OS=Arabidopsis thaliana GN=RPL18A PE=2 SV=3
          Length = 188

 Score =  257 bits (657), Expect = 4e-68
 Identities = 133/188 (70%), Positives = 150/188 (79%), Gaps = 1/188 (0%)
 Frame = +2

Query: 23  MGIDLPAGGRNKKTKRTAPKSDNVYLKLVVKLYRFLVRRTGSPFNAVVLKRLFMSRTNRP 202
           MGIDL AGG++KKTKRT PKSD+VYLKL+VK  R+LVRRT S FNAV+LKRLFMS+ N+ 
Sbjct: 1   MGIDLIAGGKSKKTKRTEPKSDDVYLKLLVKANRYLVRRTESKFNAVILKRLFMSKVNKA 60

Query: 203 PLSLSRLTRYMKDKEDKIXXXXXXXXXXXRLYELPALKIAALRFTETARARILKAGGDCL 382
           PLSLSRL RYM  K+ KI           R+ ++PAL + ALRFTE+ARARI KAGG+CL
Sbjct: 61  PLSLSRLVRYMDGKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIHKAGGECL 120

Query: 383 TFDQLALKAPTGS-NTVLLRGPKNAREAVKHFGRAPGVPHSHTKPYVRSKGRKFEKARGR 559
           TFDQLAL  PT S NTVLLRGPKN REAVKHFG APGVPHSHTKPYVR  G+K E ARGR
Sbjct: 121 TFDQLALPCPTWSENTVLLRGPKNTREAVKHFGPAPGVPHSHTKPYVRQTGKKIEIARGR 180

Query: 560 RNSRGYKV 583
           R SRG+KV
Sbjct: 181 RRSRGFKV 188


>sp|P12001|RL18_RAT 60S ribosomal protein L18 OS=Rattus norvegicus
           GN=Rpl18 PE=2 SV=2
          Length = 188

 Score =  230 bits (586), Expect = 6e-60
 Identities = 117/188 (62%), Positives = 141/188 (75%), Gaps = 2/188 (1%)
 Frame = +2

Query: 23  MGIDLPAGGRNKKTKRTAPKSDNVYLKLVVKLYRFLVRRTGSPFNAVVLKRLFMSRTNRP 202
           MG+D+    +++K +R  PKS ++YL+L+VKLYRFL RRT S FN VVLKRLFMSRTNRP
Sbjct: 1   MGVDI-RHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRP 59

Query: 203 PLSLSRLTRYMK--DKEDKIXXXXXXXXXXXRLYELPALKIAALRFTETARARILKAGGD 376
           PLSLSR+ R MK   +E+K            R+ E+P LK+ ALR +  AR+RILKAGG 
Sbjct: 60  PLSLSRMIRKMKLPGRENKTAVVVGTITDDVRILEVPKLKVCALRVSSRARSRILKAGGK 119

Query: 377 CLTFDQLALKAPTGSNTVLLRGPKNAREAVKHFGRAPGVPHSHTKPYVRSKGRKFEKARG 556
            LTFDQLAL++P G  TVLL GP+  RE  +HFG+APG PHSHTKPYVRSKGRKFE+ARG
Sbjct: 120 ILTFDQLALESPKGRGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARG 179

Query: 557 RRNSRGYK 580
           RR SRGYK
Sbjct: 180 RRASRGYK 187


>sp|P35980|RL18_MOUSE 60S ribosomal protein L18 OS=Mus musculus
           GN=Rpl18 PE=2 SV=3
          Length = 188

 Score =  230 bits (586), Expect = 6e-60
 Identities = 117/188 (62%), Positives = 141/188 (75%), Gaps = 2/188 (1%)
 Frame = +2

Query: 23  MGIDLPAGGRNKKTKRTAPKSDNVYLKLVVKLYRFLVRRTGSPFNAVVLKRLFMSRTNRP 202
           MG+D+    +++K +R  PKS ++YL+L+VKLYRFL RRT S FN VVLKRLFMSRTNRP
Sbjct: 1   MGVDI-RHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRP 59

Query: 203 PLSLSRLTRYMK--DKEDKIXXXXXXXXXXXRLYELPALKIAALRFTETARARILKAGGD 376
           PLSLSR+ R MK   +E+K            R+ E+P LK+ ALR +  AR+RILKAGG 
Sbjct: 60  PLSLSRMIRKMKLPGRENKTAVVVGTVTDDVRILEVPKLKVCALRVSSRARSRILKAGGK 119

Query: 377 CLTFDQLALKAPTGSNTVLLRGPKNAREAVKHFGRAPGVPHSHTKPYVRSKGRKFEKARG 556
            LTFDQLAL++P G  TVLL GP+  RE  +HFG+APG PHSHTKPYVRSKGRKFE+ARG
Sbjct: 120 ILTFDQLALESPKGRGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARG 179

Query: 557 RRNSRGYK 580
           RR SRGYK
Sbjct: 180 RRASRGYK 187


>sp|Q4R5H8|RL18_MACFA 60S ribosomal protein L18 OS=Macaca
           fascicularis GN=RPL18 PE=2 SV=1
          Length = 188

 Score =  229 bits (584), Expect = 1e-59
 Identities = 117/188 (62%), Positives = 140/188 (74%), Gaps = 2/188 (1%)
 Frame = +2

Query: 23  MGIDLPAGGRNKKTKRTAPKSDNVYLKLVVKLYRFLVRRTGSPFNAVVLKRLFMSRTNRP 202
           MG+D+    +++K +R  PKS ++YL+L+VKLYRFL RRT S FN VVLKRLFMSRTNRP
Sbjct: 1   MGVDI-RHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRP 59

Query: 203 PLSLSRLTRYMK--DKEDKIXXXXXXXXXXXRLYELPALKIAALRFTETARARILKAGGD 376
           PLSLSR+ R MK   +E+K            R+ E+P LK+ ALR T  AR+RIL+AGG 
Sbjct: 60  PLSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGK 119

Query: 377 CLTFDQLALKAPTGSNTVLLRGPKNAREAVKHFGRAPGVPHSHTKPYVRSKGRKFEKARG 556
            LTFDQLAL +P G  TVLL GP+  RE  +HFG+APG PHSHTKPYVRSKGRKFE+ARG
Sbjct: 120 ILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARG 179

Query: 557 RRNSRGYK 580
           RR SRGYK
Sbjct: 180 RRASRGYK 187


>sp|Q4PM04|RL18_IXOSC 60S ribosomal protein L18 OS=Ixodes scapularis
           GN=RpL18 PE=2 SV=1
          Length = 188

 Score =  229 bits (584), Expect = 1e-59
 Identities = 117/188 (62%), Positives = 146/188 (77%), Gaps = 2/188 (1%)
 Frame = +2

Query: 23  MGIDLPAGGRNKKTKRTAPKSDNVYLKLVVKLYRFLVRRTGSPFNAVVLKRLFMSRTNRP 202
           MGID+     ++K  R  PKS+NVYL L+VK+YRFL RR+G+ FN +VLKRLFMSR N+P
Sbjct: 1   MGIDINHK-YDRKVVRRRPKSENVYLGLLVKVYRFLARRSGAKFNRIVLKRLFMSRINKP 59

Query: 203 PLSLSRLTRYMKD--KEDKIXXXXXXXXXXXRLYELPALKIAALRFTETARARILKAGGD 376
            +SL+R+TR+MK   +E+ I           RLY++P L++ ALR TE ARARILKAGG+
Sbjct: 60  VISLARVTRFMKKPGRENLIAVVVGTVTDDLRLYDVPKLRLCALRVTERARARILKAGGE 119

Query: 377 CLTFDQLALKAPTGSNTVLLRGPKNAREAVKHFGRAPGVPHSHTKPYVRSKGRKFEKARG 556
            LTFDQLA++AP G  TVL++GP+N+REA +HFG APGVPHSHTKPYVRSKGRKFE+ARG
Sbjct: 120 ILTFDQLAVQAPKGKGTVLMQGPRNSREACRHFGPAPGVPHSHTKPYVRSKGRKFERARG 179

Query: 557 RRNSRGYK 580
           RR SR YK
Sbjct: 180 RRKSRRYK 187


>sp|Q07020|RL18_HUMAN 60S ribosomal protein L18 OS=Homo sapiens
           GN=RPL18 PE=1 SV=2
          Length = 188

 Score =  229 bits (584), Expect = 1e-59
 Identities = 117/188 (62%), Positives = 140/188 (74%), Gaps = 2/188 (1%)
 Frame = +2

Query: 23  MGIDLPAGGRNKKTKRTAPKSDNVYLKLVVKLYRFLVRRTGSPFNAVVLKRLFMSRTNRP 202
           MG+D+    +++K +R  PKS ++YL+L+VKLYRFL RRT S FN VVLKRLFMSRTNRP
Sbjct: 1   MGVDI-RHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRP 59

Query: 203 PLSLSRLTRYMK--DKEDKIXXXXXXXXXXXRLYELPALKIAALRFTETARARILKAGGD 376
           PLSLSR+ R MK   +E+K            R+ E+P LK+ ALR T  AR+RIL+AGG 
Sbjct: 60  PLSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGK 119

Query: 377 CLTFDQLALKAPTGSNTVLLRGPKNAREAVKHFGRAPGVPHSHTKPYVRSKGRKFEKARG 556
            LTFDQLAL +P G  TVLL GP+  RE  +HFG+APG PHSHTKPYVRSKGRKFE+ARG
Sbjct: 120 ILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARG 179

Query: 557 RRNSRGYK 580
           RR SRGYK
Sbjct: 180 RRASRGYK 187


>sp|Q90YV0|RL18_ICTPU 60S ribosomal protein L18 OS=Ictalurus
           punctatus GN=rpl18 PE=2 SV=3
          Length = 188

 Score =  229 bits (583), Expect = 1e-59
 Identities = 115/188 (61%), Positives = 140/188 (74%), Gaps = 2/188 (1%)
 Frame = +2

Query: 23  MGIDLPAGGRNKKTKRTAPKSDNVYLKLVVKLYRFLVRRTGSPFNAVVLKRLFMSRTNRP 202
           MG+D+    +++K  RT PKS ++YL+L+VKLYRFL RR+ +PFN VVLKRLFMS+TNRP
Sbjct: 1   MGVDI-RHNKDRKVHRTEPKSQDIYLRLLVKLYRFLARRSDAPFNKVVLKRLFMSKTNRP 59

Query: 203 PLSLSRLTRYMK--DKEDKIXXXXXXXXXXXRLYELPALKIAALRFTETARARILKAGGD 376
           PL+LSRL R MK   +E+KI           R+  +P LK+ ALR T  AR RILKAGG 
Sbjct: 60  PLALSRLIRKMKLQGRENKIAVVVGTITDDVRILNIPKLKVCALRVTAGARRRILKAGGQ 119

Query: 377 CLTFDQLALKAPTGSNTVLLRGPKNAREAVKHFGRAPGVPHSHTKPYVRSKGRKFEKARG 556
            +TFDQLA+  P G  TVLL GP+ ARE  +HFG+APG PHSHTKPY+RSKGRKFE+ARG
Sbjct: 120 VMTFDQLAVTTPKGQGTVLLSGPRKAREVYRHFGKAPGTPHSHTKPYIRSKGRKFERARG 179

Query: 557 RRNSRGYK 580
           RR SRGYK
Sbjct: 180 RRASRGYK 187
tr_hit_id A9S3J2
Definition tr|A9S3J2|A9S3J2_PHYPA Ribosomal protein L18 OS=Physcomitrella patens subsp. patens
Align length 187
Score (bit) 301.0
E-value 3.0e-80
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK957039|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0027_F02, 5'
         (694 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9S3J2|A9S3J2_PHYPA Ribosomal protein L18 OS=Physcomitrella p...   301   3e-80
tr|A7Q8E9|A7Q8E9_VITVI Chromosome chr5 scaffold_64, whole genome...   300   6e-80
tr|Q10LN7|Q10LN7_ORYSJ Ribosomal protein L18 OS=Oryza sativa sub...   300   8e-80
tr|B8APD9|B8APD9_ORYSI Putative uncharacterized protein OS=Oryza...   300   8e-80
tr|A5BIA1|A5BIA1_VITVI Putative uncharacterized protein OS=Vitis...   300   8e-80
tr|A9RCW9|A9RCW9_PHYPA Ribosomal protein L18 OS=Physcomitrella p...   299   1e-79
tr|A9PBR7|A9PBR7_POPTR Putative uncharacterized protein OS=Popul...   299   1e-79
tr|A9TSA3|A9TSA3_PHYPA Ribosomal protein L18 OS=Physcomitrella p...   298   2e-79
tr|A9NME8|A9NME8_PICSI Putative uncharacterized protein OS=Picea...   298   2e-79
tr|A9U4T2|A9U4T2_PHYPA Predicted protein OS=Physcomitrella paten...   298   3e-79
tr|A7PRY5|A7PRY5_VITVI Chromosome chr14 scaffold_27, whole genom...   298   3e-79
tr|A9P0A7|A9P0A7_PICSI Putative uncharacterized protein OS=Picea...   296   8e-79
tr|B6SJ08|B6SJ08_MAIZE 60S ribosomal protein L18 OS=Zea mays PE=...   295   2e-78
tr|A9S389|A9S389_PHYPA Ribosomal protein L18 OS=Physcomitrella p...   295   2e-78
tr|B6SJC8|B6SJC8_MAIZE 60S ribosomal protein L18 OS=Zea mays PE=...   294   3e-78
tr|A9NNN6|A9NNN6_PICSI Putative uncharacterized protein OS=Picea...   293   5e-78
tr|Q5I7L0|Q5I7L0_WHEAT Ribosomal protein L18 OS=Triticum aestivu...   293   9e-78
tr|A9PAJ5|A9PAJ5_POPTR Putative uncharacterized protein OS=Popul...   292   1e-77
tr|Q5WMY3|Q5WMY3_ORYSJ Ribosomal protein L18 OS=Oryza sativa sub...   290   8e-77
tr|A2Y0K0|A2Y0K0_ORYSI Ribosomal protein L18 OS=Oryza sativa sub...   290   8e-77
tr|A3AHT0|A3AHT0_ORYSJ Ribosomal protein L18 OS=Oryza sativa sub...   289   1e-76
tr|Q6ZDW5|Q6ZDW5_ORYSJ Ribosomal protein L18 OS=Oryza sativa sub...   288   2e-76
tr|A2YPV7|A2YPV7_ORYSI Ribosomal protein L18 OS=Oryza sativa sub...   288   2e-76
tr|A3BNC7|A3BNC7_ORYSJ Ribosomal protein L18 OS=Oryza sativa sub...   286   7e-76
tr|A9P8I5|A9P8I5_POPTR Putative uncharacterized protein OS=Popul...   285   1e-75
tr|B7FMF5|B7FMF5_MEDTR Putative uncharacterized protein OS=Medic...   284   3e-75
tr|A4S2V6|A4S2V6_OSTLU Ribosomal protein L18 OS=Ostreococcus luc...   279   1e-73
tr|A8IKZ2|A8IKZ2_CHLRE Ribosomal protein L18 OS=Chlamydomonas re...   268   2e-70
tr|B7FMG0|B7FMG0_MEDTR Putative uncharacterized protein OS=Medic...   255   2e-66
tr|Q4KTG8|Q4KTG8_SUBDO Ribosomal protein L18 OS=Suberites domunc...   248   3e-64

>tr|A9S3J2|A9S3J2_PHYPA Ribosomal protein L18 OS=Physcomitrella
           patens subsp. patens GN=PHYPADRAFT_208285 PE=3 SV=1
          Length = 186

 Score =  301 bits (771), Expect = 3e-80
 Identities = 154/187 (82%), Positives = 164/187 (87%)
 Frame = +2

Query: 23  MGIDLPAGGRNKKTKRTAPKSDNVYLKLVVKLYRFLVRRTGSPFNAVVLKRLFMSRTNRP 202
           MGIDL AGGRNKKTKRTAPKS NVYLKL+VKLYRFLVRRT +PFNAVVLKRLFMSR NRP
Sbjct: 1   MGIDLKAGGRNKKTKRTAPKSGNVYLKLLVKLYRFLVRRTDAPFNAVVLKRLFMSRINRP 60

Query: 203 PLSLSRLTRYMKDKEDKIXXXXXXXXXXXRLYELPALKIAALRFTETARARILKAGGDCL 382
           P+S+SRL RYMK KEDKI           R+YE+PALK+AALRFTETARARILK GG+ L
Sbjct: 61  PISMSRLVRYMKGKEDKIAVIVGSVTDDTRIYEVPALKVAALRFTETARARILKNGGEVL 120

Query: 383 TFDQLALKAPTGSNTVLLRGPKNAREAVKHFGRAPGVPHSHTKPYVRSKGRKFEKARGRR 562
           TFDQLAL+APTGSN VLLRGPKNAREAVKHFG APGVP SH KPYVRSKGRKFEKARGRR
Sbjct: 121 TFDQLALRAPTGSNCVLLRGPKNAREAVKHFG-APGVPRSHAKPYVRSKGRKFEKARGRR 179

Query: 563 NSRGYKV 583
           NSRG+KV
Sbjct: 180 NSRGFKV 186


>tr|A7Q8E9|A7Q8E9_VITVI Chromosome chr5 scaffold_64, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00033028001
           PE=4 SV=1
          Length = 225

 Score =  300 bits (768), Expect = 6e-80
 Identities = 147/192 (76%), Positives = 166/192 (86%)
 Frame = +2

Query: 8   ALVRTMGIDLPAGGRNKKTKRTAPKSDNVYLKLVVKLYRFLVRRTGSPFNAVVLKRLFMS 187
           A    MGIDL AGG++KKTKRTAPKSD++YLKL+VKLYRFLVRRTGS FNAV+LKRLFMS
Sbjct: 34  AAAAAMGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMS 93

Query: 188 RTNRPPLSLSRLTRYMKDKEDKIXXXXXXXXXXXRLYELPALKIAALRFTETARARILKA 367
           + N+PP+SLSRL RYM+ KEDKI           R+YE+P LK+ ALRFTE ARARI KA
Sbjct: 94  KINKPPMSLSRLIRYMQGKEDKIAVLVGTVTDDLRVYEVPTLKVTALRFTERARARIEKA 153

Query: 368 GGDCLTFDQLALKAPTGSNTVLLRGPKNAREAVKHFGRAPGVPHSHTKPYVRSKGRKFEK 547
           GG+CLTFDQLAL+AP G NTVLLRGPKNAREAVKHFG+APGVPHSHTKPYVRSKGRKFE+
Sbjct: 154 GGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGKAPGVPHSHTKPYVRSKGRKFER 213

Query: 548 ARGRRNSRGYKV 583
           ARGRRNSRG++V
Sbjct: 214 ARGRRNSRGFRV 225


>tr|Q10LN7|Q10LN7_ORYSJ Ribosomal protein L18 OS=Oryza sativa subsp.
           japonica GN=Os03g0341100 PE=3 SV=1
          Length = 187

 Score =  300 bits (767), Expect = 8e-80
 Identities = 147/187 (78%), Positives = 166/187 (88%)
 Frame = +2

Query: 23  MGIDLPAGGRNKKTKRTAPKSDNVYLKLVVKLYRFLVRRTGSPFNAVVLKRLFMSRTNRP 202
           MGIDL AGGRNKKTKRTAPKSD+VYLKL+VKLYRFLVRRT SPFNAV+L+RLFMS+TNRP
Sbjct: 1   MGIDLVAGGRNKKTKRTAPKSDDVYLKLIVKLYRFLVRRTKSPFNAVILRRLFMSKTNRP 60

Query: 203 PLSLSRLTRYMKDKEDKIXXXXXXXXXXXRLYELPALKIAALRFTETARARILKAGGDCL 382
           PLSL RL R+M+ KE++I           R+YE+PA+K+AALRFTETARARI+  GG+CL
Sbjct: 61  PLSLRRLVRFMEGKENQIAVIVGTVTDDKRVYEVPAMKVAALRFTETARARIVNTGGECL 120

Query: 383 TFDQLALKAPTGSNTVLLRGPKNAREAVKHFGRAPGVPHSHTKPYVRSKGRKFEKARGRR 562
           TFDQLAL+AP G NTVLLRGPKNAREAVKHFG APGVPHS+TKPYVRSKGRKFEKARGRR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSNTKPYVRSKGRKFEKARGRR 180

Query: 563 NSRGYKV 583
           NS+G+KV
Sbjct: 181 NSKGFKV 187


>tr|B8APD9|B8APD9_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_11506 PE=4 SV=1
          Length = 187

 Score =  300 bits (767), Expect = 8e-80
 Identities = 147/187 (78%), Positives = 166/187 (88%)
 Frame = +2

Query: 23  MGIDLPAGGRNKKTKRTAPKSDNVYLKLVVKLYRFLVRRTGSPFNAVVLKRLFMSRTNRP 202
           MGIDL AGGRNKKTKRTAPKSD+VYLKL+VKLYRFLVRRT SPFNAV+L+RLFMS+TNRP
Sbjct: 1   MGIDLVAGGRNKKTKRTAPKSDDVYLKLIVKLYRFLVRRTKSPFNAVILRRLFMSKTNRP 60

Query: 203 PLSLSRLTRYMKDKEDKIXXXXXXXXXXXRLYELPALKIAALRFTETARARILKAGGDCL 382
           PLSL RL R+M+ KE++I           R+YE+PA+K+AALRFTETARARI+  GG+CL
Sbjct: 61  PLSLRRLVRFMEGKENQIAVIVGTVTDDKRVYEVPAMKVAALRFTETARARIVNTGGECL 120

Query: 383 TFDQLALKAPTGSNTVLLRGPKNAREAVKHFGRAPGVPHSHTKPYVRSKGRKFEKARGRR 562
           TFDQLAL+AP G NTVLLRGPKNAREAVKHFG APGVPHS+TKPYVRSKGRKFEKARGRR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSNTKPYVRSKGRKFEKARGRR 180

Query: 563 NSRGYKV 583
           NS+G+KV
Sbjct: 181 NSKGFKV 187


>tr|A5BIA1|A5BIA1_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_022459 PE=4 SV=1
          Length = 187

 Score =  300 bits (767), Expect = 8e-80
 Identities = 147/187 (78%), Positives = 165/187 (88%)
 Frame = +2

Query: 23  MGIDLPAGGRNKKTKRTAPKSDNVYLKLVVKLYRFLVRRTGSPFNAVVLKRLFMSRTNRP 202
           MGIDL AGG++KKTKRTAPKSD++YLKL+VKLYRFLVRRTGS FNAV+LKRLFMS+ N+P
Sbjct: 1   MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKVNKP 60

Query: 203 PLSLSRLTRYMKDKEDKIXXXXXXXXXXXRLYELPALKIAALRFTETARARILKAGGDCL 382
           PLSLSRL RYM  KE KI           R+YE+PALK+ ALRFTETARARI KAGG+CL
Sbjct: 61  PLSLSRLVRYMGGKEGKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120

Query: 383 TFDQLALKAPTGSNTVLLRGPKNAREAVKHFGRAPGVPHSHTKPYVRSKGRKFEKARGRR 562
           TFDQLAL+AP G NTVLLRGPKN+REAVKHFG+APGVPHSHTKPYVRSKGRKFE+ARGRR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGKAPGVPHSHTKPYVRSKGRKFERARGRR 180

Query: 563 NSRGYKV 583
           NSRG++V
Sbjct: 181 NSRGFRV 187


>tr|A9RCW9|A9RCW9_PHYPA Ribosomal protein L18 OS=Physcomitrella
           patens subsp. patens GN=PHYPADRAFT_158546 PE=3 SV=1
          Length = 186

 Score =  299 bits (766), Expect = 1e-79
 Identities = 151/187 (80%), Positives = 165/187 (88%)
 Frame = +2

Query: 23  MGIDLPAGGRNKKTKRTAPKSDNVYLKLVVKLYRFLVRRTGSPFNAVVLKRLFMSRTNRP 202
           MGIDL AGGRNKKTKRTAPKS NVYLKL+VKLYRFLVRRT +PFN+V+LKRLFMSRTNR 
Sbjct: 1   MGIDLKAGGRNKKTKRTAPKSGNVYLKLLVKLYRFLVRRTDAPFNSVILKRLFMSRTNRA 60

Query: 203 PLSLSRLTRYMKDKEDKIXXXXXXXXXXXRLYELPALKIAALRFTETARARILKAGGDCL 382
           PLS+SRL +YM  K+DKI           R +E+PALK+AALRFTETARARILKAGG+CL
Sbjct: 61  PLSMSRLVKYMAGKDDKIAVLVGTITDDVRQFEVPALKVAALRFTETARARILKAGGECL 120

Query: 383 TFDQLALKAPTGSNTVLLRGPKNAREAVKHFGRAPGVPHSHTKPYVRSKGRKFEKARGRR 562
           TFDQLAL+APTG+NTVLLRGPKNAREAVKHFG APGVP SH KPYVRSKGRKFEKARGRR
Sbjct: 121 TFDQLALRAPTGANTVLLRGPKNAREAVKHFG-APGVPQSHAKPYVRSKGRKFEKARGRR 179

Query: 563 NSRGYKV 583
           NSRG+KV
Sbjct: 180 NSRGFKV 186


>tr|A9PBR7|A9PBR7_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 187

 Score =  299 bits (765), Expect = 1e-79
 Identities = 146/187 (78%), Positives = 165/187 (88%)
 Frame = +2

Query: 23  MGIDLPAGGRNKKTKRTAPKSDNVYLKLVVKLYRFLVRRTGSPFNAVVLKRLFMSRTNRP 202
           MGIDL AGG++KKTKRTAPKSD++YLKL+VKLYRFLVRRTGS FNAV+LKRLFMS+TN+P
Sbjct: 1   MGIDLKAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKTNKP 60

Query: 203 PLSLSRLTRYMKDKEDKIXXXXXXXXXXXRLYELPALKIAALRFTETARARILKAGGDCL 382
           PL+LSRL  YMK KE KI           R+YE+PALK+ ALRFTETARARI KAGG+CL
Sbjct: 61  PLALSRLITYMKGKEGKIAVVVGTITDDIRVYEVPALKVTALRFTETARARIEKAGGECL 120

Query: 383 TFDQLALKAPTGSNTVLLRGPKNAREAVKHFGRAPGVPHSHTKPYVRSKGRKFEKARGRR 562
           TFDQLAL+AP G NTVLLRGPKNAREAVKHFG APGVPHSHTKPY+RSKGRKFEKARG+R
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYIRSKGRKFEKARGKR 180

Query: 563 NSRGYKV 583
           NS+G++V
Sbjct: 181 NSKGFRV 187


>tr|A9TSA3|A9TSA3_PHYPA Ribosomal protein L18 OS=Physcomitrella
           patens subsp. patens GN=PHYPADRAFT_197718 PE=3 SV=1
          Length = 186

 Score =  298 bits (763), Expect = 2e-79
 Identities = 152/187 (81%), Positives = 163/187 (87%)
 Frame = +2

Query: 23  MGIDLPAGGRNKKTKRTAPKSDNVYLKLVVKLYRFLVRRTGSPFNAVVLKRLFMSRTNRP 202
           MGIDL AGGRNKKTKRTAPKS NVYLKL+VKLYRFLVRRT +PFN+VVLKRLFMSRTNR 
Sbjct: 1   MGIDLKAGGRNKKTKRTAPKSQNVYLKLLVKLYRFLVRRTDAPFNSVVLKRLFMSRTNRA 60

Query: 203 PLSLSRLTRYMKDKEDKIXXXXXXXXXXXRLYELPALKIAALRFTETARARILKAGGDCL 382
           PLS+SRL +YM  KE KI           R +E+PALK+ ALRFTETARARILKAGG+CL
Sbjct: 61  PLSMSRLVKYMTGKEGKIAVLVGTITDDVRQFEVPALKVCALRFTETARARILKAGGECL 120

Query: 383 TFDQLALKAPTGSNTVLLRGPKNAREAVKHFGRAPGVPHSHTKPYVRSKGRKFEKARGRR 562
           TFDQLAL+APTGSNTVLLRGPKNAREAVKHFG APGVP SH KPYVRSKGRKFEKARGRR
Sbjct: 121 TFDQLALRAPTGSNTVLLRGPKNAREAVKHFG-APGVPQSHAKPYVRSKGRKFEKARGRR 179

Query: 563 NSRGYKV 583
           NSRG+KV
Sbjct: 180 NSRGFKV 186


>tr|A9NME8|A9NME8_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 187

 Score =  298 bits (763), Expect = 2e-79
 Identities = 146/187 (78%), Positives = 165/187 (88%)
 Frame = +2

Query: 23  MGIDLPAGGRNKKTKRTAPKSDNVYLKLVVKLYRFLVRRTGSPFNAVVLKRLFMSRTNRP 202
           MGIDL AGG++KKTKRTAPKS+++YLKL+VKLYRFLVRRT S FNAV+LKRLFMS+TN+P
Sbjct: 1   MGIDLVAGGKSKKTKRTAPKSEDIYLKLLVKLYRFLVRRTSSSFNAVILKRLFMSKTNKP 60

Query: 203 PLSLSRLTRYMKDKEDKIXXXXXXXXXXXRLYELPALKIAALRFTETARARILKAGGDCL 382
           PLSLSRL RYM+ K+DKI           R+YELP +K+ ALRFTETARARILKAGG+CL
Sbjct: 61  PLSLSRLARYMQGKDDKIAVVVGTITDDNRVYELPPVKVTALRFTETARARILKAGGECL 120

Query: 383 TFDQLALKAPTGSNTVLLRGPKNAREAVKHFGRAPGVPHSHTKPYVRSKGRKFEKARGRR 562
           TFDQLAL+AP G NTVLLRGPK+ REAVKHFGRAPGVPHSHTKPYVRSKGRK+E ARGRR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKSHREAVKHFGRAPGVPHSHTKPYVRSKGRKYEMARGRR 180

Query: 563 NSRGYKV 583
           NSRG+KV
Sbjct: 181 NSRGFKV 187


>tr|A9U4T2|A9U4T2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_201150 PE=4 SV=1
          Length = 186

 Score =  298 bits (762), Expect = 3e-79
 Identities = 151/187 (80%), Positives = 164/187 (87%)
 Frame = +2

Query: 23  MGIDLPAGGRNKKTKRTAPKSDNVYLKLVVKLYRFLVRRTGSPFNAVVLKRLFMSRTNRP 202
           MGIDL AGGRNKKTKRTAPKSDNVYLKL+VKLYRFLVRRT +PFN+VVLKRLFMSR NRP
Sbjct: 1   MGIDLKAGGRNKKTKRTAPKSDNVYLKLLVKLYRFLVRRTDAPFNSVVLKRLFMSRINRP 60

Query: 203 PLSLSRLTRYMKDKEDKIXXXXXXXXXXXRLYELPALKIAALRFTETARARILKAGGDCL 382
           P+S+SRL +YM  KE KI           R+YE+PALK+AALRFTETARARILK+GG+ L
Sbjct: 61  PISMSRLVKYMTGKEGKIAVIVGTVTDDTRIYEVPALKVAALRFTETARARILKSGGEVL 120

Query: 383 TFDQLALKAPTGSNTVLLRGPKNAREAVKHFGRAPGVPHSHTKPYVRSKGRKFEKARGRR 562
           TFDQLAL+APTGSN VLLRGPKNAREAVKHFG APGVP SH KPYVRSKGRKFEKARGRR
Sbjct: 121 TFDQLALRAPTGSNCVLLRGPKNAREAVKHFG-APGVPQSHAKPYVRSKGRKFEKARGRR 179

Query: 563 NSRGYKV 583
           NSRG+KV
Sbjct: 180 NSRGFKV 186