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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK957052
Clone id TST39A01NGRL0027_F16
Library
Length 541
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0027_F16. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GGATTTAGAAAGGGACTCGAATGATGATGGGTCTGCTGGTGACGGTCCTTCATATCCTCG
ATCTGCTCGGGCCCGGCGTGATCGCATCAGAAATCCTGTTACTGGTAATGACACCGATGT
GGATGCGAAACAGAATGGTTTTCAAGCATCTGGCCCTGCTAGGGTACGTCATAAGCGTCG
TAAGCAAGACTCTTCAGATGAAGATTTTGAGATGACCGCAGAAGAAGGTTTGAGTAATGG
TAGCTGGGCTAACGAGGGTGCTGTTGCAAAACGACCCATTACTAGGGCCATCGAAGCAGG
CCCTTCTGATTCTTGTACCGGAGCCCTGGTTTCTTATCCTGTCCAGCTTAAAGGGAGAAG
TGCTAATTCTGATGCCCTACCAACAGCGAACTCAAGAACAGGGGAGCCATCCTGTTCTAA
TAGCAGCTCCTCATCAGCTAGAGAGGCGAACGCTATGGACAAAGACACAGCTGCTAATAA
GAGAAAAGGTTAAAGTAAAGGTTTTAAGAAGGAGAAGAGGCCACAGGTACCGTTTTTTGG
C
■■Homology search results ■■ -
sp_hit_id Q6J9G0
Definition sp|Q6J9G0|STYK1_HUMAN Tyrosine protein-kinase STYK1 OS=Homo sapiens
Align length 64
Score (bit) 32.0
E-value 2.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK957052|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0027_F16, 5'
         (541 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6J9G0|STYK1_HUMAN Tyrosine protein-kinase STYK1 OS=Homo sapi...    32   2.0  
sp|Q9C5X4|ATX1_ARATH Histone-lysine N-methyltransferase ATX1 OS=...    32   2.0  
sp|Q0ZME2|IORF_CVHN5 Protein I OS=Human coronavirus HKU1 (isolat...    30   5.7  
sp|Q4QR29|CTR9_XENLA RNA polymerase-associated protein CTR9 homo...    30   5.8  
sp|Q54QR1|LIMA_DICDI LIM domain-containing protein A OS=Dictyost...    30   9.8  
sp|O32869|MTRH_METKA Tetrahydromethanopterin S-methyltransferase...    30   9.9  
sp|Q18BS8|CINA_CLOD6 Putative competence-damage inducible protei...    30   9.9  

>sp|Q6J9G0|STYK1_HUMAN Tyrosine protein-kinase STYK1 OS=Homo sapiens
           GN=STYK1 PE=2 SV=3
          Length = 422

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
 Frame = +3

Query: 246 GLTRVLLQ---NDPL-LGPSKQALLILVPEPWFLILSSLKGEVLILMPYQQRTQEQGSHP 413
           G+TR+LL+   +D L +   KQ  +I+VP     I   L G +L L   +QRTQ+Q S P
Sbjct: 2   GMTRMLLECSLSDKLCVIQEKQYEVIIVPTLLVTIFLILLGVILWLFIREQRTQQQRSGP 61

Query: 414 VLIA 425
             IA
Sbjct: 62  QGIA 65


>sp|Q9C5X4|ATX1_ARATH Histone-lysine N-methyltransferase ATX1
           OS=Arabidopsis thaliana GN=ATX1 PE=1 SV=2
          Length = 1062

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = +2

Query: 155 PARVRHKRRKQDSSDEDFEMTAEEGLSNGSWANEGAVAKRP 277
           P R+   ++  DS D D   + EEG S G   N+G V  RP
Sbjct: 396 PERMSQLQKGADSVDSDMANSTEEGNSGGDLLNDGEVWLRP 436


>sp|Q0ZME2|IORF_CVHN5 Protein I OS=Human coronavirus HKU1 (isolate
           N5) GN=N PE=3 SV=1
          Length = 205

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
 Frame = +3

Query: 96  LLLVMTPMWMRNRMVFKHLALLGY-VISVVSKTLQMKILR*PQKKV*VMVAGLTRVLLQN 272
           L+L+  PM+ +  ++FK L+LLG+ ++    K + +K      ++  +++AG   VL   
Sbjct: 145 LILLFPPMFRQGILLFKKLSLLGFRLVRFCLKAIMLK-----AQEGLLLIAGQVHVLNHV 199

Query: 273 DPLL 284
           DP++
Sbjct: 200 DPII 203


>sp|Q4QR29|CTR9_XENLA RNA polymerase-associated protein CTR9 homolog
            OS=Xenopus laevis GN=ctr9 PE=2 SV=1
          Length = 1157

 Score = 30.4 bits (67), Expect = 5.8
 Identities = 30/113 (26%), Positives = 47/113 (41%), Gaps = 1/113 (0%)
 Frame = +2

Query: 185  QDSSDEDFEMTAEEGLSNGSWANEGAVAKRPITRAIEAGPSDSCTGALVSYPVQLKGRSA 364
            +D SDED    A+EG +  S +++G   ++   R I    SD+             G  +
Sbjct: 1018 EDDSDEDKLKIADEGHARDSDSDDG--PRKSQKRVISDSDSDN-------------GNKS 1062

Query: 365  NSDA-LPTANSRTGEPXXXXXXXXXAREANAMDKDTAANKRKG*SKGFKKEKR 520
             SDA  P  + R+ E           R+ +  D D+A ++R   S G   E R
Sbjct: 1063 GSDAGSPQKSQRSDEDSDNAFARKRRRQISGSDNDSAQSRRS--SGGSDNESR 1113


>sp|Q54QR1|LIMA_DICDI LIM domain-containing protein A
           OS=Dictyostelium discoideum GN=limA PE=2 SV=1
          Length = 1183

 Score = 29.6 bits (65), Expect = 9.8
 Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 9/90 (10%)
 Frame = -3

Query: 260 HPR*PSYHYSNLLLRSSQNLHLKSLAYDAYDVP*QGQMLENHSVS---HPHRC----HYQ 102
           HP+ P  H  +      Q+ H  S A+       Q Q  + HS+S   HPH      H+ 
Sbjct: 715 HPQHPHSHPQHPHSHPHQS-HSHSHAHSQPTTTVQPQQQQQHSLSTVVHPHNATPSHHHH 773

Query: 101 *QDF*CDHAGPEQIEDMKDRHQ--QTHHHS 18
            Q     H+ P   +  + +HQ  Q HHH+
Sbjct: 774 HQH---SHSQPHSFDHNQHQHQPLQHHHHT 800


>sp|O32869|MTRH_METKA Tetrahydromethanopterin S-methyltransferase
           subunit H OS=Methanopyrus kandleri GN=mtrH PE=3 SV=2
          Length = 322

 Score = 29.6 bits (65), Expect = 9.9
 Identities = 16/63 (25%), Positives = 29/63 (46%)
 Frame = -2

Query: 432 EELLLEQDGSPVLEFAVGRASELALLPLSWTG*ETRAPVQESEGPASMALVMGRFATAPS 253
           EE L ++ G+P++   +G + E  +  L W    T AP+      A + +   + A    
Sbjct: 62  EEELADETGNPMMAHIMGESEEAIIRYLDWVADVTDAPIIVDSTEAEVKVAAVKHAQEVG 121

Query: 252 LAQ 244
           LA+
Sbjct: 122 LAE 124


>sp|Q18BS8|CINA_CLOD6 Putative competence-damage inducible protein
           OS=Clostridium difficile (strain 630) GN=cinA PE=3 SV=1
          Length = 418

 Score = 29.6 bits (65), Expect = 9.9
 Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 1/94 (1%)
 Frame = +2

Query: 230 LSNGSWANEGAVAKRPITRAIEAGPSDSCTGALVSYP-VQLKGRSANSDALPTANSRTGE 406
           +S G  A E AV+K  + + +    ++SCTG LVS   +   G S+         S   +
Sbjct: 257 ISEGETALEDAVSKLLVEKNLTIAVAESCTGGLVSSSLINYPGISSVFLEGCVTYSNDSK 316

Query: 407 PXXXXXXXXXAREANAMDKDTAANKRKG*SKGFK 508
                       E  A+ + TA    +G +KG K
Sbjct: 317 MKRLGVKRETLEEFGAVSEQTAIEMAEGVAKGLK 350
tr_hit_id A8I4A5
Definition tr|A8I4A5|A8I4A5_CHLRE Squamosa promoter binding protein OS=Chlamydomonas reinhardtii
Align length 88
Score (bit) 37.4
E-value 0.51
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK957052|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0027_F16, 5'
         (541 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A8I4A5|A8I4A5_CHLRE Squamosa promoter binding protein OS=Chla...    37   0.51 
tr|A8Q7Y7|A8Q7Y7_MALGO Putative uncharacterized protein OS=Malas...    35   2.6  
tr|B4NEQ4|B4NEQ4_DROWI GK25682 OS=Drosophila willistoni GN=GK256...    34   4.3  
tr|B4IBA8|B4IBA8_DROSE GM15276 OS=Drosophila sechellia GN=GM1527...    34   4.3  
tr|Q0AQ49|Q0AQ49_MARMM Ribonuclease E OS=Maricaulis maris (strai...    34   4.4  
tr|B7YQK3|B7YQK3_VARPD Lipopolysaccharide transport periplasmic ...    34   4.4  
tr|Q6CDQ2|Q6CDQ2_YARLI YALI0B22176p OS=Yarrowia lipolytica GN=YA...    34   5.6  
tr|B6N0A6|B6N0A6_BRAFL Putative uncharacterized protein OS=Branc...    34   5.7  
tr|B5DVG8|B5DVG8_DROPS GA26604 OS=Drosophila pseudoobscura pseud...    34   5.7  
tr|B5I0H0|B5I0H0_9ACTO Putative uncharacterized protein OS=Strep...    33   7.4  
tr|B8M7Y5|B8M7Y5_9EURO Transcription factor TFIIIB complex subun...    33   7.4  
tr|O18409|O18409_DROME Testis-specific RNP-type RNA binding prot...    33   9.5  
tr|B1ZEH9|B1ZEH9_METPB Surface antigen (D15) OS=Methylobacterium...    33   9.7  
tr|A4H5A5|A4H5A5_LEIBR Putative uncharacterized protein OS=Leish...    33   9.7  

>tr|A8I4A5|A8I4A5_CHLRE Squamosa promoter binding protein
           OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_186869 PE=4
           SV=1
          Length = 1318

 Score = 37.4 bits (85), Expect = 0.51
 Identities = 25/88 (28%), Positives = 38/88 (43%)
 Frame = +2

Query: 119 VDAKQNGFQASGPARVRHKRRKQDSSDEDFEMTAEEGLSNGSWANEGAVAKRPITRAIEA 298
           VDA     ++   A+  H R   DS+D + +     G S+G+W   GA    P+T A  A
Sbjct: 168 VDASTKEPRSQRKAKATHPR-SDDSNDNELDSRGSFGASHGTWPASGAPTSVPVTEADPA 226

Query: 299 GPSDSCTGALVSYPVQLKGRSANSDALP 382
                 +GA+   P  +     N  +LP
Sbjct: 227 ATPAVSSGAV---PQLMTRAGLNDQSLP 251


>tr|A8Q7Y7|A8Q7Y7_MALGO Putative uncharacterized protein
           OS=Malassezia globosa (strain ATCC 96807 / CBS 7966)
           GN=MGL_3160 PE=4 SV=1
          Length = 863

 Score = 35.0 bits (79), Expect = 2.6
 Identities = 26/86 (30%), Positives = 40/86 (46%)
 Frame = +2

Query: 2   DLERDSNDDGSAGDGPSYPXXXXXXXXXXXNPVTGNDTDVDAKQNGFQASGPARVRHKRR 181
           D + DS+ DG   DG                    +D DVDA+Q+   +SG +    + R
Sbjct: 59  DSDSDSDGDGDGSDGLEAENDEQ------------DDNDVDAEQSNADSSGGSET--EDR 104

Query: 182 KQDSSDEDFEMTAEEGLSNGSWANEG 259
           + + SD D +  +E G S+GS A +G
Sbjct: 105 ENEDSDRDAQQ-SEAGSSDGSEAKDG 129


>tr|B4NEQ4|B4NEQ4_DROWI GK25682 OS=Drosophila willistoni GN=GK25682
           PE=4 SV=1
          Length = 983

 Score = 34.3 bits (77), Expect = 4.3
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = -3

Query: 152 QMLENHSVSHPHRCHYQ*QDF*CDHAGPEQIEDMKDRHQQTHHH 21
           Q+ ++H   HPH  H Q Q         +Q +  + +HQQ+HHH
Sbjct: 246 QLQQHHQQHHPHHFHLQQQHQ--QQQQQQQQQQQQQQHQQSHHH 287


>tr|B4IBA8|B4IBA8_DROSE GM15276 OS=Drosophila sechellia GN=GM15276
           PE=4 SV=1
          Length = 1236

 Score = 34.3 bits (77), Expect = 4.3
 Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
 Frame = -3

Query: 239 HYSNLLLRSSQNLHLKSLA--YDAYDVP*QGQMLENHSVSHPHRCHYQ*QDF*CDHAGPE 66
           H+S+   +  Q  H+ S    Y  + +  Q Q L NH   H H  H+        H+  +
Sbjct: 600 HHSHQQQQQQQQQHMSSPQHQYQQHQILHQQQQLPNHHHHHHHHHHH--------HSQLQ 651

Query: 65  QIEDMKDRHQQTHHHSSP 12
           Q++  + + QQ  H   P
Sbjct: 652 QLQQQQQQQQQQQHQQQP 669


>tr|Q0AQ49|Q0AQ49_MARMM Ribonuclease E OS=Maricaulis maris (strain
           MCS10) GN=Mmar10_1296 PE=4 SV=1
          Length = 890

 Score = 34.3 bits (77), Expect = 4.4
 Identities = 15/32 (46%), Positives = 23/32 (71%)
 Frame = +2

Query: 107 NDTDVDAKQNGFQASGPARVRHKRRKQDSSDE 202
           +D+D D +Q G +ASG  R R +RR++ SSD+
Sbjct: 590 DDSDTDDEQEGREASGGRRRRRRRRRKPSSDD 621


>tr|B7YQK3|B7YQK3_VARPD Lipopolysaccharide transport periplasmic
           protein LptA OS=Variovorax paradoxus S110
           GN=VaparDRAFT_3378 PE=3 SV=1
          Length = 239

 Score = 34.3 bits (77), Expect = 4.4
 Identities = 22/89 (24%), Positives = 39/89 (43%)
 Frame = +2

Query: 116 DVDAKQNGFQASGPARVRHKRRKQDSSDEDFEMTAEEGLSNGSWANEGAVAKRPITRAIE 295
           D +  Q G   + P +  + ++K+++ DE  E  +E    +    N   +    + R I 
Sbjct: 85  DAEGYQYGVVTAAPGKRAYYKQKRNAPDEWIEGESEVIEYDSRADNVKFIRNAVMRRLIG 144

Query: 296 AGPSDSCTGALVSYPVQLKGRSANSDALP 382
           A P+D  TGAL+ Y       + N   +P
Sbjct: 145 ATPNDESTGALIVYDQSNDTYTVNGSTVP 173


>tr|Q6CDQ2|Q6CDQ2_YARLI YALI0B22176p OS=Yarrowia lipolytica
           GN=YALI0B22176g PE=4 SV=1
          Length = 590

 Score = 33.9 bits (76), Expect = 5.6
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = -3

Query: 149 MLENHSVSHPHRCHYQ*QDF*CDHAGPEQIEDMKDRHQQTHHHSS 15
           M+ +H   HPH  + Q  D+      P+Q    +   QQ HH+SS
Sbjct: 138 MMSHHGAPHPHAAYPQMYDYQYPPGQPQQQPPPQQAQQQLHHYSS 182


>tr|B6N0A6|B6N0A6_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_88999 PE=4 SV=1
          Length = 587

 Score = 33.9 bits (76), Expect = 5.7
 Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = -1

Query: 292 DGPSNGSFCNSTLVSPATITQT-FFCGHLKIFI*RVLLTTLMTYPSRARCLKTILF 128
           D P + S  NS ++SP T+T T F C  L        L T +TYP     L T L+
Sbjct: 460 DSPQHHSVHNSHILSPRTVTNTPFRCSVLPRTALNTTLYTTLTYPVPRTALNTTLY 515


>tr|B5DVG8|B5DVG8_DROPS GA26604 OS=Drosophila pseudoobscura
            pseudoobscura GN=GA26604 PE=4 SV=1
          Length = 2855

 Score = 33.9 bits (76), Expect = 5.7
 Identities = 30/123 (24%), Positives = 49/123 (39%), Gaps = 6/123 (4%)
 Frame = +2

Query: 44   GPSYPXXXXXXXXXXXNPVTGN-DTDVDAKQNGFQASGPARVRHKRRKQDSSDEDFEMTA 220
            GP+ P            P T + D  V A++   +A+ P        K D +D+  E+TA
Sbjct: 789  GPTTPADKTSAEEEIAGPTTPSADVSVSAEEEIVKATTP--------KSDIADDSTELTA 840

Query: 221  EEGLSNGSWANEGAVAKRPITRAIE-----AGPSDSCTGALVSYPVQLKGRSANSDALPT 385
            E+     +   EG+ A  PI+ + E     +   +   G   S P +   +   +  LPT
Sbjct: 841  EQDEEPVTETEEGSTAGTPISSSTEGVQAASEKDEPSIGTSTSAPARAGEKDEAATTLPT 900

Query: 386  ANS 394
              S
Sbjct: 901  PES 903


>tr|B5I0H0|B5I0H0_9ACTO Putative uncharacterized protein
           OS=Streptomyces sviceus ATCC 29083 GN=SSEG_05242 PE=4
           SV=1
          Length = 128

 Score = 33.5 bits (75), Expect = 7.4
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = -2

Query: 126 ASTSVSLPVTGFLMRSRRARADRGYEGPSPADP 28
           AS  VSL + G   R+R   AD G+ GP P DP
Sbjct: 25  ASLHVSLQIFGSAPRTRGPDADTGFAGPKPGDP 57