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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK957074
Clone id TST39A01NGRL0027_G15
Library
Length 567
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0027_G15. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
ATCTATAATGAGGTAAGCTTATGAAGTCGACTAGCTGACAAGGAGGAACGGGAAGGGGGG
TTTGGGGACTCTTGAAGGTAACCCATGGCATCATCATCTGTAGAGTCGGAGCAGGATCCA
GAGCCTGATGAGCCTACATTCCGATTCGATCAAAACAATACGTCATCTCAGAGTCTTCTC
AGTGGAGGTGGTTCAGGTTATGAAAGCCAATATGGAAGCTTGTTTGGAAGTAGGTTCAGT
TTAACAGATGGATCTGGGATCTTCATATCGTCACTTGCCTTGACTATCATTATTTCAGCA
ATTGCTGTTGTAGGCATTGTCCTTGTTGCAGCGATAATCACGCTTGCAGTGATGCTATCG
TCTTGTGGGCAAAACTCGACTGTGAATGTACAGTTTAAAAGGTCTGCTGATTTCTGCTCC
AGCTTTCGCTTGAACATTGAACTAAACAACATGCAAGGAAGGGCACTTCCTGGAACATGT
GATGCAGAGATCTTTGAGTATGTTCATGGGGGGCAATACATAAAGGATGTGGAAATGGCA
GTGAACTCTGCCCGACATTACCTAAAG
■■Homology search results ■■ -
sp_hit_id P15490
Definition sp|P15490|VSPA_SOYBN Stem 28 kDa glycoprotein OS=Glycine max
Align length 52
Score (bit) 35.4
E-value 0.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK957074|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0027_G15, 5'
         (567 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P15490|VSPA_SOYBN Stem 28 kDa glycoprotein OS=Glycine max GN=...    35   0.20 
sp|P10742|S25K_SOYBN Stem 31 kDa glycoprotein (Fragment) OS=Glyc...    35   0.20 
sp|Q9YMV2|DNLI_NPVLD DNA ligase OS=Lymantria dispar multicapsid ...    31   3.7  
sp|P10743|VSPB_SOYBN Stem 31 kDa glycoprotein OS=Glycine max GN=...    31   3.8  
sp|O75170|SAPS2_HUMAN Serine/threonine-protein phosphatase 6 reg...    30   8.3  
sp|A1A4L1|THEM4_BOVIN Thioesterase superfamily member 4 OS=Bos t...    30   8.4  

>sp|P15490|VSPA_SOYBN Stem 28 kDa glycoprotein OS=Glycine max
           GN=VSPA PE=2 SV=1
          Length = 254

 Score = 35.4 bits (80), Expect = 0.20
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +1

Query: 415 CSSFRLNIELNNMQG-RALPGTCDAEIFEYVHGGQYIKDVEMAVNSARHYLK 567
           C+S+RL +E +N+ G   +P  C     EY+HG QY  D +     A  Y +
Sbjct: 42  CASWRLAVEAHNIFGFETIPEECVEATKEYIHGEQYRSDSKTVNQQAYFYAR 93


>sp|P10742|S25K_SOYBN Stem 31 kDa glycoprotein (Fragment) OS=Glycine
           max GN=VSP25 PE=2 SV=2
          Length = 291

 Score = 35.4 bits (80), Expect = 0.20
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +1

Query: 415 CSSFRLNIELNNMQG-RALPGTCDAEIFEYVHGGQYIKDVEMAVNSARHYLK 567
           C+S+RL +E +N+ G   +P  C     EY+HG QY  D +     A  Y +
Sbjct: 39  CASWRLAVEAHNIFGFETIPEECVEATKEYIHGEQYRSDSKTVNQQAYFYAR 90


>sp|Q9YMV2|DNLI_NPVLD DNA ligase OS=Lymantria dispar multicapsid
           nuclear polyhedrosis virus GN=LIG PE=1 SV=1
          Length = 548

 Score = 31.2 bits (69), Expect = 3.7
 Identities = 13/56 (23%), Positives = 25/56 (44%)
 Frame = -3

Query: 175 DSEMTYCFDRIGM*AHQALDPAPTLQMMMPWVTFKSPQTPLPVPPCQLVDFISLPH 8
           D ++   F  +   AH  L     ++++ PW  F+ P  P    PC+ +  + + H
Sbjct: 134 DEDLLTVFRVVSDHAHAGLSAEDVMELVEPWERFQKPVPPALAQPCRRLASVLVKH 189


>sp|P10743|VSPB_SOYBN Stem 31 kDa glycoprotein OS=Glycine max
           GN=VSPB PE=2 SV=1
          Length = 254

 Score = 31.2 bits (69), Expect = 3.8
 Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +1

Query: 415 CSSFRLNIELNNMQG-RALPGTCDAEIFEYVHGGQYIKDVEMAVNSARHY 561
           C+SFRL +E +N++  + +P  C     +Y++G Q+  D +     A  Y
Sbjct: 43  CASFRLAVEAHNIRAFKTIPEECVEPTKDYINGEQFRSDSKTVNQQAFFY 92


>sp|O75170|SAPS2_HUMAN Serine/threonine-protein phosphatase 6
           regulatory subunit 2 OS=Homo sapiens GN=SAPS2 PE=1 SV=2
          Length = 966

 Score = 30.0 bits (66), Expect = 8.3
 Identities = 18/51 (35%), Positives = 22/51 (43%)
 Frame = -3

Query: 553 GQSSLPFPHPLCIAPHEHTQRSLHHMFQEVPFLACCLVQCSSESWSRNQQT 401
           G  SL  P P    P       + H+FQ+     CCLVQ   E+W  N  T
Sbjct: 424 GNRSLETPQPAASLPDN---TMVTHLFQK-----CCLVQRILEAWEANDHT 466


>sp|A1A4L1|THEM4_BOVIN Thioesterase superfamily member 4 OS=Bos
           taurus GN=THEM4 PE=2 SV=1
          Length = 237

 Score = 30.0 bits (66), Expect = 8.4
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = +1

Query: 376 STVNVQFKRSADFCSSFRLNIELNNMQGRALPGTCD 483
           + +N+ FKR    CS   +N +L+ ++GR L  +C+
Sbjct: 175 ANLNINFKRPVPLCSVVVINSQLDKLEGRKLFLSCN 210
tr_hit_id A9TX97
Definition tr|A9TX97|A9TX97_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 58
Score (bit) 54.7
E-value 4.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK957074|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0027_G15, 5'
         (567 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TX97|A9TX97_PHYPA Predicted protein OS=Physcomitrella paten...    55   4e-06
tr|A9ST51|A9ST51_PHYPA Predicted protein OS=Physcomitrella paten...    55   4e-06
tr|A9T054|A9T054_PHYPA Predicted protein OS=Physcomitrella paten...    44   0.008
tr|Q9M0F4|Q9M0F4_ARATH Acid phosphatase-like protein (At4g29270)...    42   0.018
tr|Q9LG77|Q9LG77_ORYSJ cDNA clone:006-301-D10, full insert seque...    42   0.018
tr|A9TWQ1|A9TWQ1_PHYPA Predicted protein OS=Physcomitrella paten...    42   0.018
tr|A2ZQ66|A2ZQ66_ORYSJ Putative uncharacterized protein OS=Oryza...    42   0.018
tr|A2WLL0|A2WLL0_ORYSI Putative uncharacterized protein OS=Oryza...    42   0.018
tr|A9PBL1|A9PBL1_POPTR Putative uncharacterized protein OS=Popul...    42   0.024
tr|A7Q1M1|A7Q1M1_VITVI Chromosome chr7 scaffold_44, whole genome...    42   0.024
tr|A7PIC9|A7PIC9_VITVI Chromosome chr13 scaffold_17, whole genom...    42   0.024
tr|Q9FNC4|Q9FNC4_ARATH Vegetative storage protein-like OS=Arabid...    42   0.031
tr|Q8LC74|Q8LC74_ARATH Vegetative storage protein-like OS=Arabid...    42   0.031
tr|A2Q4U2|A2Q4U2_MEDTR Putative uncharacterized protein OS=Medic...    41   0.041
tr|A5C9Z6|A5C9Z6_VITVI Putative uncharacterized protein (Chromos...    40   0.069
tr|Q9ZVI2|Q9ZVI2_ARATH Putative acid phosphatase OS=Arabidopsis ...    40   0.090
tr|B7FL33|B7FL33_MEDTR Putative uncharacterized protein OS=Medic...    40   0.090
tr|Q6QWF7|Q6QWF7_GLYTO Vegetative storage protein OS=Glycine tom...    39   0.15 
tr|Q6QWF8|Q6QWF8_9FABA Vegetative storage protein OS=Glycine fal...    39   0.26 
tr|Q9ZWC4|Q9ZWC4_ARATH F21M11.2 protein (At1g04040/F21M11_2) (Si...    36   1.3  
tr|Q5VPF2|Q5VPF2_ORYSJ Os06g0139800 protein OS=Oryza sativa subs...    35   2.2  
tr|A3B881|A3B881_ORYSJ Putative uncharacterized protein OS=Oryza...    35   2.2  
tr|A2Y925|A2Y925_ORYSI Putative uncharacterized protein OS=Oryza...    35   2.2  
tr|B6TV54|B6TV54_MAIZE Acid phosphatase 1 OS=Zea mays PE=2 SV=1        35   3.8  
tr|B6T3P0|B6T3P0_MAIZE Stem 28 kDa glycoprotein OS=Zea mays PE=2...    35   3.8  
tr|A1YKE7|A1YKE7_BRASY Acid phosphatase OS=Brachypodium sylvatic...    35   3.8  
tr|B7FIP7|B7FIP7_MEDTR Putative uncharacterized protein OS=Medic...    34   6.5  
tr|A7Q5A2|A7Q5A2_VITVI Chromosome undetermined scaffold_52, whol...    34   6.5  
tr|B6U3D0|B6U3D0_MAIZE Acid phosphatase 1 OS=Zea mays PE=2 SV=1        33   8.5  

>tr|A9TX97|A9TX97_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_152209 PE=4 SV=1
          Length = 225

 Score = 54.7 bits (130), Expect = 4e-06
 Identities = 27/58 (46%), Positives = 35/58 (60%)
 Frame = +1

Query: 391 QFKRSADFCSSFRLNIELNNMQGRALPGTCDAEIFEYVHGGQYIKDVEMAVNSARHYL 564
           Q K  ++ C+SF LN E NN+QG  LP  C+  +  YV  GQY  D  +AV +AR YL
Sbjct: 6   QKKPVSNSCASFSLNAETNNLQGYLLPQECEGFVAGYVGSGQYYSDFAVAVEAARTYL 63


>tr|A9ST51|A9ST51_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_134967 PE=4 SV=1
          Length = 228

 Score = 54.7 bits (130), Expect = 4e-06
 Identities = 25/58 (43%), Positives = 36/58 (62%)
 Frame = +1

Query: 391 QFKRSADFCSSFRLNIELNNMQGRALPGTCDAEIFEYVHGGQYIKDVEMAVNSARHYL 564
           Q K  ++ C+SF  N E+NN+QG  LP  C+  +  YV+ GQY  D  +A+ +AR YL
Sbjct: 6   QKKPLSNACASFAFNTEMNNLQGYLLPQECEGYVAGYVNSGQYHSDFAVAIEAARTYL 63


>tr|A9T054|A9T054_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_138120 PE=4 SV=1
          Length = 241

 Score = 43.5 bits (101), Expect = 0.008
 Identities = 22/52 (42%), Positives = 28/52 (53%)
 Frame = +1

Query: 409 DFCSSFRLNIELNNMQGRALPGTCDAEIFEYVHGGQYIKDVEMAVNSARHYL 564
           D C+SF  N E+NN+Q   LP  C      Y   GQY  D   A+++AR YL
Sbjct: 22  DVCASFARNAEVNNLQNWTLPQDCVTFSALYFDSGQYHADCAHAIDAARTYL 73


>tr|Q9M0F4|Q9M0F4_ARATH Acid phosphatase-like protein (At4g29270)
           OS=Arabidopsis thaliana GN=At4g29270 PE=2 SV=1
          Length = 256

 Score = 42.4 bits (98), Expect = 0.018
 Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
 Frame = +1

Query: 406 ADFCSSFRLNIELNNM-QGRALPGTCDAEIFEYVHGGQYIKDVEMAVNSARHYLK 567
           A +C S+RL  E NN+   + +P  C+  I  Y++GGQ+ KD ++  + A  Y K
Sbjct: 41  ASYCESWRLAAETNNVGPWKVIPSQCENYIKNYINGGQFDKDYDVVASYAIDYAK 95


>tr|Q9LG77|Q9LG77_ORYSJ cDNA clone:006-301-D10, full insert sequence
           OS=Oryza sativa subsp. japonica GN=P0710E05.30 PE=2 SV=1
          Length = 303

 Score = 42.4 bits (98), Expect = 0.018
 Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
 Frame = +1

Query: 409 DFCSSFRLNIELNNMQG-RALPGTCDAEIFEYVHGGQYIKDVEMAVNSARHY 561
           D+C S+R+ +E NN++G  A P  CD  +  Y+ G  Y +D ++ V+ A  Y
Sbjct: 57  DYCDSWRVGVEANNVRGWTAAPRKCDNYVENYMRGHHYRRDSKVVVDEAAAY 108


>tr|A9TWQ1|A9TWQ1_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_151925 PE=4 SV=1
          Length = 224

 Score = 42.4 bits (98), Expect = 0.018
 Identities = 19/51 (37%), Positives = 30/51 (58%)
 Frame = +1

Query: 415 CSSFRLNIELNNMQGRALPGTCDAEIFEYVHGGQYIKDVEMAVNSARHYLK 567
           C+SF L+ E+ N++   LP  C      Y+  GQY  D  +A+++AR YL+
Sbjct: 18  CASFALSAEVYNLRNWTLPQDCITNAEIYIGSGQYYVDFALAIDAARTYLR 68


>tr|A2ZQ66|A2ZQ66_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_000688 PE=4 SV=1
          Length = 227

 Score = 42.4 bits (98), Expect = 0.018
 Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
 Frame = +1

Query: 409 DFCSSFRLNIELNNMQG-RALPGTCDAEIFEYVHGGQYIKDVEMAVNSARHY 561
           D+C S+R+ +E NN++G  A P  CD  +  Y+ G  Y +D ++ V+ A  Y
Sbjct: 57  DYCDSWRVGVEANNVRGWTAAPRKCDNYVENYMRGHHYRRDSKVVVDEAAAY 108


>tr|A2WLL0|A2WLL0_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_00725 PE=4 SV=1
          Length = 303

 Score = 42.4 bits (98), Expect = 0.018
 Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
 Frame = +1

Query: 409 DFCSSFRLNIELNNMQG-RALPGTCDAEIFEYVHGGQYIKDVEMAVNSARHY 561
           D+C S+R+ +E NN++G  A P  CD  +  Y+ G  Y +D ++ V+ A  Y
Sbjct: 57  DYCDSWRVGVEANNVRGWTAAPRKCDNYVENYMRGHHYRRDSKVVVDEAAAY 108


>tr|A9PBL1|A9PBL1_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 255

 Score = 42.0 bits (97), Expect = 0.024
 Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
 Frame = +1

Query: 409 DFCSSFRLNIELNNMQG-RALPGTCDAEIFEYVHGGQYIKDVEMAVNSARHYL 564
           ++C S+R+N+ELNN++    +P  C   +  Y+   QY  D E A+   R YL
Sbjct: 40  NYCESWRINVELNNIKDFEVVPQECVDHVKHYMTSSQYTADSERAIEEVRLYL 92


>tr|A7Q1M1|A7Q1M1_VITVI Chromosome chr7 scaffold_44, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00028521001
           PE=4 SV=1
          Length = 295

 Score = 42.0 bits (97), Expect = 0.024
 Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
 Frame = +1

Query: 409 DFCSSFRLNIELNNMQG-RALPGTCDAEIFEYVHGGQYIKDVEMAVNSARHYL 564
           ++C S+R+N+ELNN++G   +P  C   + +Y+   QY  D+E A+  +  YL
Sbjct: 79  NYCESWRINVELNNIKGFDVVPQECVEFVGKYMTSSQYKADIERAIEESVLYL 131