DK957087 |
Clone id |
TST39A01NGRL0027_H04 |
Library |
TST39 |
Length |
555 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0027_H04. 5' end sequence. |
Accession |
DK957087 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL2257Contig1 |
Sequence |
GAGGCTTTCTGAACTATTAGGAGTCAAGGTCGAGAAGGCAGACGATTCTATTGGGGAAGA GGTGGAGAAAAAAGTTGCAGCCCTTCCAGATGGTGGTGTCCTACTTTTAGAAAATGTGAG GTTTTACAAAGAAGAGGAGAAAAATGATCCTGAGCATTCTAAGAAGCTAGCATCAGTTGC TGATCTCTATGTTAATGATGCATTTGGTACTGCTCATAGGGCGCATGCGTCCACTGAAGG GGTGACCAAGTATCTTAGGCCTTCCGTGGCTGGCTTTCTTCTCCAGAAGGAGCTTGACTA CCTAGATGGTGCTGTTCGCAATCCCACTCGCCCTTTTGCTGCAATTGTGGGGGGCTCAAA AGTGTCATCCAAGATTGGTGTCATTGAATCTTTGTTGGAGAAATGTGATCTCCTCTTACT TGGAGGGGGTATGATTTTCACTTTCTACAAGGCACAAGGGCTCTCTGTGGGCTCCTCTCT TGTCGAGGAAGACAAGCTTGAGCTTGCCACAAGCCTTATGAAGAAAGCCAAAGCCAAGGG TGTCTCCCTTTTACT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q42961 |
Definition |
sp|Q42961|PGKH_TOBAC Phosphoglycerate kinase, chloroplastic OS=Nicotiana tabacum |
Align length |
184 |
Score (bit) |
300.0 |
E-value |
2.0e-81 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957087|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0027_H04, 5' (555 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q42961|PGKH_TOBAC Phosphoglycerate kinase, chloroplastic OS=N... 300 2e-81 sp|P12782|PGKH_WHEAT Phosphoglycerate kinase, chloroplastic OS=T... 298 9e-81 sp|P29409|PGKH_SPIOL Phosphoglycerate kinase, chloroplastic (Fra... 298 2e-80 sp|P50318|PGKH_ARATH Phosphoglycerate kinase, chloroplastic OS=A... 298 2e-80 sp|Q42962|PGKY_TOBAC Phosphoglycerate kinase, cytosolic OS=Nicot... 290 3e-78 sp|P12783|PGKY_WHEAT Phosphoglycerate kinase, cytosolic OS=Triti... 289 7e-78 sp|Q9SBN4|PGKH_VOLCA Phosphoglycerate kinase, chloroplastic OS=V... 270 3e-72 sp|Q3MF40|PGK_ANAVT Phosphoglycerate kinase OS=Anabaena variabil... 269 6e-72 sp|Q8YPR1|PGK_ANASP Phosphoglycerate kinase OS=Anabaena sp. (str... 267 2e-71 sp|P41758|PGKH_CHLRE Phosphoglycerate kinase, chloroplastic OS=C... 267 3e-71 sp|Q10Z46|PGK_TRIEI Phosphoglycerate kinase OS=Trichodesmium ery... 256 7e-68 sp|A5GW73|PGK_SYNR3 Phosphoglycerate kinase OS=Synechococcus sp.... 251 2e-66 sp|Q7U3V0|PGK_SYNPX Phosphoglycerate kinase OS=Synechococcus sp.... 248 1e-65 sp|Q3AVX6|PGK_SYNS9 Phosphoglycerate kinase OS=Synechococcus sp.... 247 2e-65 sp|A5GPB2|PGK_SYNPW Phosphoglycerate kinase OS=Synechococcus sp.... 247 2e-65 sp|Q7V461|PGK_PROMM Phosphoglycerate kinase OS=Prochlorococcus m... 247 3e-65 sp|Q7VDZ4|PGK_PROMA Phosphoglycerate kinase OS=Prochlorococcus m... 246 5e-65 sp|A2CDG7|PGK_PROM3 Phosphoglycerate kinase OS=Prochlorococcus m... 246 7e-65 sp|Q0I6M5|PGK_SYNS3 Phosphoglycerate kinase OS=Synechococcus sp.... 245 9e-65 sp|B0CD95|PGK_ACAM1 Phosphoglycerate kinase OS=Acaryochloris mar... 245 9e-65 sp|P74421|PGK_SYNY3 Phosphoglycerate kinase OS=Synechocystis sp.... 244 3e-64 sp|Q3AGU1|PGK_SYNSC Phosphoglycerate kinase OS=Synechococcus sp.... 243 3e-64 sp|Q31P73|PGK_SYNE7 Phosphoglycerate kinase OS=Synechococcus elo... 243 3e-64 sp|A2BUH2|PGK_PROM5 Phosphoglycerate kinase OS=Prochlorococcus m... 242 8e-64 sp|Q5N4Z6|PGK_SYNP6 Phosphoglycerate kinase OS=Synechococcus sp.... 241 1e-63 sp|Q31CY6|PGK_PROM9 Phosphoglycerate kinase OS=Prochlorococcus m... 241 1e-63 sp|B0JT86|PGK_MICAN Phosphoglycerate kinase OS=Microcystis aerug... 241 2e-63 sp|A2BNZ0|PGK_PROMS Phosphoglycerate kinase OS=Prochlorococcus m... 241 2e-63 sp|A2C025|PGK_PROM1 Phosphoglycerate kinase OS=Prochlorococcus m... 240 4e-63 sp|A8G2K1|PGK_PROM2 Phosphoglycerate kinase OS=Prochlorococcus m... 239 7e-63
>sp|Q42961|PGKH_TOBAC Phosphoglycerate kinase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1 Length = 481
Score = 300 bits (769), Expect = 2e-81 Identities = 156/184 (84%), Positives = 168/184 (91%) Frame = +2
Query: 2 RLSELLGVKVEKADDSIGEEVEKKVAALPDGGVLLLENVRFYKEEEKNDPEHSKKLASVA 181 RLSELLG++V K +D IG EVEK VA+LP+GGVLLLENVRFYKEEEKN+PE +KKLAS+A Sbjct: 157 RLSELLGIQVVKVEDCIGPEVEKLVASLPEGGVLLLENVRFYKEEEKNEPEFAKKLASLA 216
Query: 182 DLYVNDAFGTAHRAHASTEGVTKYLRPSVAGFLLQKELDYLDGAVRNPTRPFAAIVGGSK 361 DLYVNDAFGTAHRAHASTEGVTK+L+PSVAGFLLQKELDYL GAV NP RPFAAIVGGSK Sbjct: 217 DLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLVGAVSNPKRPFAAIVGGSK 276
Query: 362 VSSKIGVIESLLEKCDXXXXXXXMIFTFYKAQGLSVGSSLVEEDKLELATSLMKKAKAKG 541 VSSKIGVIESLLEKCD MIFTFYKAQGLSVGSSLVEEDKLELATSL++KAKAKG Sbjct: 277 VSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGLSVGSSLVEEDKLELATSLLEKAKAKG 336
Query: 542 VSLL 553 VSLL Sbjct: 337 VSLL 340
>sp|P12782|PGKH_WHEAT Phosphoglycerate kinase, chloroplastic OS=Triticum aestivum PE=2 SV=1 Length = 480
Score = 298 bits (764), Expect = 9e-81 Identities = 156/184 (84%), Positives = 167/184 (90%) Frame = +2
Query: 2 RLSELLGVKVEKADDSIGEEVEKKVAALPDGGVLLLENVRFYKEEEKNDPEHSKKLASVA 181 RLSELLG++V+KA+D IG EVEK VA L +G VLLLENVRFYKEEEKNDPE +KKLAS+A Sbjct: 154 RLSELLGIEVKKAEDVIGPEVEKLVADLANGAVLLLENVRFYKEEEKNDPEFAKKLASLA 213
Query: 182 DLYVNDAFGTAHRAHASTEGVTKYLRPSVAGFLLQKELDYLDGAVRNPTRPFAAIVGGSK 361 DL+VNDAFGTAHRAHASTEGVTK+L+PSVAGFLLQKELDYLDGAV NP RPFAAIVGGSK Sbjct: 214 DLFVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLDGAVSNPKRPFAAIVGGSK 273
Query: 362 VSSKIGVIESLLEKCDXXXXXXXMIFTFYKAQGLSVGSSLVEEDKLELATSLMKKAKAKG 541 VSSKIGVIESLLEKCD MIFTFYKAQGLSVGSSLVEEDKLELATSL+ KAKAKG Sbjct: 274 VSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGLSVGSSLVEEDKLELATSLLAKAKAKG 333
Query: 542 VSLL 553 VSLL Sbjct: 334 VSLL 337
>sp|P29409|PGKH_SPIOL Phosphoglycerate kinase, chloroplastic (Fragment) OS=Spinacia oleracea PE=2 SV=2 Length = 433
Score = 298 bits (762), Expect = 2e-80 Identities = 155/184 (84%), Positives = 166/184 (90%) Frame = +2
Query: 2 RLSELLGVKVEKADDSIGEEVEKKVAALPDGGVLLLENVRFYKEEEKNDPEHSKKLASVA 181 RLSELLG++V KADD IG +VEK VA LP+GGVLLLENVRFYKEEEKNDPE +KKLAS+A Sbjct: 110 RLSELLGLQVVKADDCIGPDVEKLVAELPEGGVLLLENVRFYKEEEKNDPEFAKKLASLA 169
Query: 182 DLYVNDAFGTAHRAHASTEGVTKYLRPSVAGFLLQKELDYLDGAVRNPTRPFAAIVGGSK 361 DLYVNDAFGTAHRAHASTEGVTK+L+PSVAGFLLQKELDYL GAV NP RPFAAIVGGSK Sbjct: 170 DLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLVGAVSNPKRPFAAIVGGSK 229
Query: 362 VSSKIGVIESLLEKCDXXXXXXXMIFTFYKAQGLSVGSSLVEEDKLELATSLMKKAKAKG 541 VSSKIGVIESLLEKCD MIFTFYKAQG+SVGSSLVEEDKL+LATSL+ KAK KG Sbjct: 230 VSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGMSVGSSLVEEDKLDLATSLLAKAKEKG 289
Query: 542 VSLL 553 VSLL Sbjct: 290 VSLL 293
>sp|P50318|PGKH_ARATH Phosphoglycerate kinase, chloroplastic OS=Arabidopsis thaliana GN=At1g56190 PE=1 SV=2 Length = 478
Score = 298 bits (762), Expect = 2e-80 Identities = 155/184 (84%), Positives = 166/184 (90%) Frame = +2
Query: 2 RLSELLGVKVEKADDSIGEEVEKKVAALPDGGVLLLENVRFYKEEEKNDPEHSKKLASVA 181 RLSELLG++V KADD IG EVE VA+LP+GGVLLLENVRFYKEEEKN+P+ +KKLAS+A Sbjct: 155 RLSELLGIEVVKADDCIGPEVETLVASLPEGGVLLLENVRFYKEEEKNEPDFAKKLASLA 214
Query: 182 DLYVNDAFGTAHRAHASTEGVTKYLRPSVAGFLLQKELDYLDGAVRNPTRPFAAIVGGSK 361 DLYVNDAFGTAHRAHASTEGVTK+L+PSVAGFLLQKELDYL GAV NP RPFAAIVGGSK Sbjct: 215 DLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLVGAVSNPKRPFAAIVGGSK 274
Query: 362 VSSKIGVIESLLEKCDXXXXXXXMIFTFYKAQGLSVGSSLVEEDKLELATSLMKKAKAKG 541 VSSKIGVIESLLEKCD MIFTFYKAQGLSVGSSLVEEDKLELAT L+ KAKAKG Sbjct: 275 VSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGLSVGSSLVEEDKLELATELLAKAKAKG 334
Query: 542 VSLL 553 VSLL Sbjct: 335 VSLL 338
>sp|Q42962|PGKY_TOBAC Phosphoglycerate kinase, cytosolic OS=Nicotiana tabacum PE=2 SV=1 Length = 401
Score = 290 bits (742), Expect = 3e-78 Identities = 151/184 (82%), Positives = 166/184 (90%) Frame = +2
Query: 2 RLSELLGVKVEKADDSIGEEVEKKVAALPDGGVLLLENVRFYKEEEKNDPEHSKKLASVA 181 RLSELLGV+V+ A+DSIG EVEK VA +P+GGVLLLENVRFYKEEEKN+PE +KKLAS+A Sbjct: 83 RLSELLGVEVKIANDSIGPEVEKLVAEIPEGGVLLLENVRFYKEEEKNEPEFAKKLASLA 142
Query: 182 DLYVNDAFGTAHRAHASTEGVTKYLRPSVAGFLLQKELDYLDGAVRNPTRPFAAIVGGSK 361 DLYVNDAFGTAHRAHASTEGV KYL+P+VAGFL+QKELDYL GAV NP +PFAAIVGGSK Sbjct: 143 DLYVNDAFGTAHRAHASTEGVAKYLKPAVAGFLMQKELDYLVGAVANPQKPFAAIVGGSK 202
Query: 362 VSSKIGVIESLLEKCDXXXXXXXMIFTFYKAQGLSVGSSLVEEDKLELATSLMKKAKAKG 541 VSSKIGVIESLLEK D MIFTFYKAQG +VGSSLVEEDKL+LATSLM+KAKAKG Sbjct: 203 VSSKIGVIESLLEKVDVLLLGGGMIFTFYKAQGYAVGSSLVEEDKLDLATSLMEKAKAKG 262
Query: 542 VSLL 553 VSLL Sbjct: 263 VSLL 266
>sp|P12783|PGKY_WHEAT Phosphoglycerate kinase, cytosolic OS=Triticum aestivum PE=2 SV=1 Length = 401
Score = 289 bits (739), Expect = 7e-78 Identities = 152/184 (82%), Positives = 162/184 (88%) Frame = +2
Query: 2 RLSELLGVKVEKADDSIGEEVEKKVAALPDGGVLLLENVRFYKEEEKNDPEHSKKLASVA 181 RLSELLG++V A D IGEEVEK AALPDGGVLLLENVRFYKEEEKNDPE +KKLASVA Sbjct: 83 RLSELLGLEVVMAPDCIGEEVEKLAAALPDGGVLLLENVRFYKEEEKNDPEFAKKLASVA 142
Query: 182 DLYVNDAFGTAHRAHASTEGVTKYLRPSVAGFLLQKELDYLDGAVRNPTRPFAAIVGGSK 361 DLYVNDAFGTAHRAHASTEGVTK+LRPSVAGFL+QKELDYL GAV NP +PFAAIVGGSK Sbjct: 143 DLYVNDAFGTAHRAHASTEGVTKFLRPSVAGFLMQKELDYLVGAVANPKKPFAAIVGGSK 202
Query: 362 VSSKIGVIESLLEKCDXXXXXXXMIFTFYKAQGLSVGSSLVEEDKLELATSLMKKAKAKG 541 VSSKIGVIESLL K D MIFTFYKAQGL+VG SLVEEDKLELATSL++ AK+KG Sbjct: 203 VSSKIGVIESLLAKVDILILGGGMIFTFYKAQGLAVGKSLVEEDKLELATSLIETAKSKG 262
Query: 542 VSLL 553 V LL Sbjct: 263 VKLL 266
>sp|Q9SBN4|PGKH_VOLCA Phosphoglycerate kinase, chloroplastic OS=Volvox carteri GN=PGK PE=2 SV=1 Length = 462
Score = 270 bits (690), Expect = 3e-72 Identities = 143/184 (77%), Positives = 154/184 (83%) Frame = +2
Query: 2 RLSELLGVKVEKADDSIGEEVEKKVAALPDGGVLLLENVRFYKEEEKNDPEHSKKLASVA 181 RLSELLG +V+K DD IG VE+ VA+L G +LLLENVRFYKEEEKNDPE +KKLAS A Sbjct: 144 RLSELLGKEVKKVDDCIGPSVEQAVASLKSGELLLLENVRFYKEEEKNDPEFAKKLASNA 203
Query: 182 DLYVNDAFGTAHRAHASTEGVTKYLRPSVAGFLLQKELDYLDGAVRNPTRPFAAIVGGSK 361 DLYVNDAFGTAHRAHASTEGVTK+L+PSVAGFLLQKELDYLDGAV P RPF AIVGGSK Sbjct: 204 DLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLDGAVSAPKRPFVAIVGGSK 263
Query: 362 VSSKIGVIESLLEKCDXXXXXXXMIFTFYKAQGLSVGSSLVEEDKLELATSLMKKAKAKG 541 VSSKI VIE L+EKCD MIFTFYKA+GL VGSSLVEEDKLELA +L AKAKG Sbjct: 264 VSSKITVIEKLMEKCDKIIIGGGMIFTFYKARGLKVGSSLVEEDKLELAKNLEAIAKAKG 323
Query: 542 VSLL 553 V LL Sbjct: 324 VQLL 327
>sp|Q3MF40|PGK_ANAVT Phosphoglycerate kinase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=pgk PE=3 SV=1 Length = 400
Score = 269 bits (688), Expect = 6e-72 Identities = 140/184 (76%), Positives = 155/184 (84%) Frame = +2
Query: 2 RLSELLGVKVEKADDSIGEEVEKKVAALPDGGVLLLENVRFYKEEEKNDPEHSKKLASVA 181 RLSELLG +V K DDSIG+EV KVAAL +G VLLLENVRFYKEEEKNDPE +KKLA+ A Sbjct: 82 RLSELLGQEVVKTDDSIGDEVAAKVAALQNGQVLLLENVRFYKEEEKNDPEFAKKLAANA 141
Query: 182 DLYVNDAFGTAHRAHASTEGVTKYLRPSVAGFLLQKELDYLDGAVRNPTRPFAAIVGGSK 361 D YVNDAFGTAHRAHASTEGVTK+L PSVAG+L++KEL YL A+ NP RP AAI+GGSK Sbjct: 142 DFYVNDAFGTAHRAHASTEGVTKFLSPSVAGYLVEKELQYLQSAIENPQRPLAAIIGGSK 201
Query: 362 VSSKIGVIESLLEKCDXXXXXXXMIFTFYKAQGLSVGSSLVEEDKLELATSLMKKAKAKG 541 VSSKIGVIE+LLEKCD MIFTFYKA+GL+VG SLVEEDKLELA SL KAK +G Sbjct: 202 VSSKIGVIETLLEKCDKLIIGGGMIFTFYKARGLNVGKSLVEEDKLELAKSLEAKAKERG 261
Query: 542 VSLL 553 VSLL Sbjct: 262 VSLL 265
>sp|Q8YPR1|PGK_ANASP Phosphoglycerate kinase OS=Anabaena sp. (strain PCC 7120) GN=pgk PE=1 SV=1 Length = 400
Score = 267 bits (683), Expect = 2e-71 Identities = 139/184 (75%), Positives = 154/184 (83%) Frame = +2
Query: 2 RLSELLGVKVEKADDSIGEEVEKKVAALPDGGVLLLENVRFYKEEEKNDPEHSKKLASVA 181 RLSELLG +V K DDSIG+EV KVA L +G VLLLENVRFYKEEEKNDPE +KKLA+ A Sbjct: 82 RLSELLGQEVIKTDDSIGDEVAAKVATLQNGQVLLLENVRFYKEEEKNDPEFAKKLAANA 141
Query: 182 DLYVNDAFGTAHRAHASTEGVTKYLRPSVAGFLLQKELDYLDGAVRNPTRPFAAIVGGSK 361 D YVNDAFGTAHRAHASTEGVTK+L PSVAG+L++KEL YL A+ NP RP AAI+GGSK Sbjct: 142 DFYVNDAFGTAHRAHASTEGVTKFLSPSVAGYLVEKELQYLQSAIENPQRPLAAIIGGSK 201
Query: 362 VSSKIGVIESLLEKCDXXXXXXXMIFTFYKAQGLSVGSSLVEEDKLELATSLMKKAKAKG 541 VSSKIGVIE+LLEKCD MIFTFYKA+GL+VG SLVEEDKLELA SL KAK +G Sbjct: 202 VSSKIGVIETLLEKCDKLIIGGGMIFTFYKARGLNVGKSLVEEDKLELAKSLEAKAKERG 261
Query: 542 VSLL 553 VSLL Sbjct: 262 VSLL 265
>sp|P41758|PGKH_CHLRE Phosphoglycerate kinase, chloroplastic OS=Chlamydomonas reinhardtii PE=1 SV=1 Length = 461
Score = 267 bits (682), Expect = 3e-71 Identities = 139/184 (75%), Positives = 153/184 (83%) Frame = +2
Query: 2 RLSELLGVKVEKADDSIGEEVEKKVAALPDGGVLLLENVRFYKEEEKNDPEHSKKLASVA 181 RLSELLG V K DD IG EVEK V A+ +G +LLLEN RFYKEEEKN+PE +KKLA+ A Sbjct: 143 RLSELLGKPVTKVDDCIGPEVEKAVGAMKNGELLLLENCRFYKEEEKNEPEFAKKLAANA 202
Query: 182 DLYVNDAFGTAHRAHASTEGVTKYLRPSVAGFLLQKELDYLDGAVRNPTRPFAAIVGGSK 361 DLYVNDAFGTAHRAHASTEGVTK+L+PSVAGFLLQKELDYLDGAV NP RPF AIVGGSK Sbjct: 203 DLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLDGAVSNPKRPFVAIVGGSK 262
Query: 362 VSSKIGVIESLLEKCDXXXXXXXMIFTFYKAQGLSVGSSLVEEDKLELATSLMKKAKAKG 541 VSSKI VIE+L+EKCD MIFTFYKA+ L VGSSLVE+DK+ELA L + AKAKG Sbjct: 263 VSSKITVIEALMEKCDKIIIGGGMIFTFYKARALKVGSSLVEDDKIELAKKLEEMAKAKG 322
Query: 542 VSLL 553 V LL Sbjct: 323 VQLL 326
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9LD57 |
Definition |
tr|Q9LD57|Q9LD57_ARATH Phosphoglycerate kinase OS=Arabidopsis thaliana |
Align length |
184 |
Score (bit) |
301.0 |
E-value |
2.0e-80 |
Report |
|