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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK957092
Clone id TST39A01NGRL0027_H09
Library
Length 580
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0027_H09. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GGGCTTGCGAGCTATTGTGTAGGCGCAGCTGGTTGGGGAACGATAATATGTTGGTGTGTA
TGTGATCTGTATAGAGAGAAATTAAGAGGATAGAATATAATTGGTGCAGCTATGAAAACG
TCAGCGACTGCGTCGACGAGCAGCAACATGATGAGCAGTGAGAGGAGTAGCATGAGTAGC
TGTGGAAGGGGGCTGGGGCTGGCGAGGACGGCCAAGGCCGTAGCGGAGGCGGTGATCGTC
GCGGCTTGCTTGATGTGGGTGCTCTACTGGTTCTTCAAGCCGGAGCCGCAGGCCGACGAT
ACCCACCTCTCCAAGAACACCCGCTCTCGCTTCTTCCGCACTGATGGCCGGGAAGGATTT
TCCCTTATATACCAAACATTGCCTTTTGTTGTTGTGGCCATTTTGAGCTTTTTGGTGATT
GAGCTACGAGCTTTTATCAGGTCAAAAGAGTCAATGCCATCCATACAGGCACAACAAAAA
TTAAGATTTTCAAGTTTAAACGCCTACCCCTTGTGGGTGCATAGTCCTTTTGGAGTTGTA
ACTATGGCTGAATTTTTCTCTTCATTATTGGCATACTCTT
■■Homology search results ■■ -
sp_hit_id A4FBB2
Definition sp|A4FBB2|APT_SACEN Adenine phosphoribosyltransferase OS=Saccharopolyspora erythraea (strain NRRL 23338)
Align length 57
Score (bit) 32.7
E-value 1.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK957092|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0027_H09, 5'
         (580 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A4FBB2|APT_SACEN Adenine phosphoribosyltransferase OS=Sacchar...    33   1.3  
sp|P48789|XYNA_PRERU Endo-1,4-beta-xylanase A OS=Prevotella rumi...    30   6.7  
sp|A0LK67|Y2137_SYNFM UPF0182 protein Sfum_2137 OS=Syntrophobact...    30   8.7  
sp|Q8ERS9|PPNK1_OCEIH Probable inorganic polyphosphate/ATP-NAD k...    30   8.7  

>sp|A4FBB2|APT_SACEN Adenine phosphoribosyltransferase
           OS=Saccharopolyspora erythraea (strain NRRL 23338)
           GN=apt PE=3 SV=1
          Length = 182

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
 Frame = -2

Query: 366 KGKSFPAISAEEARAGVLGEV-------GIVGLRLRLEEPVEHPHQASRDDHRLRYG 217
           +G  F  ++  EAR  +LG         G+VGLR    +P + P  A R D+RL YG
Sbjct: 57  RGHDFDVVAGVEARGFLLGAAVAQAHGTGVVGLR----KPGKLPEVAHRVDYRLEYG 109


>sp|P48789|XYNA_PRERU Endo-1,4-beta-xylanase A OS=Prevotella
           ruminicola GN=xynA PE=3 SV=1
          Length = 369

 Score = 30.4 bits (67), Expect = 6.7
 Identities = 13/57 (22%), Positives = 33/57 (57%)
 Frame = +1

Query: 403 LSFLVIELRAFIRSKESMPSIQAQQKLRFSSLNAYPLWVHSPFGVVTMAEFFSSLLA 573
           L  +++ + A  +++ +M  +  +  L  ++LN++ +W H P  V  + + F+S++A
Sbjct: 9   LGLMLLPIAAVAQNQPTMKDVLGKYFLVGTALNSHQIWTHDPKIVHAITDNFNSVVA 65


>sp|A0LK67|Y2137_SYNFM UPF0182 protein Sfum_2137 OS=Syntrophobacter
           fumaroxidans (strain DSM 10017 / MPOB) GN=Sfum_2137 PE=3
           SV=1
          Length = 874

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 10/69 (14%)
 Frame = +1

Query: 364 LIYQTLPFVVVAILSFLVIELRAFIRSKESMPSIQAQQKLRFSSLNAY----------PL 513
           L+Y+ + F  V +L FL+  L  ++ S+       A  K R ++L+ Y           L
Sbjct: 52  LLYRYIVFGAVTLLFFLIFFLNFWVASRYVGNVPPAPSKFRIAALDRYLNVVRMFRSGSL 111

Query: 514 WVHSPFGVV 540
           WV++P  ++
Sbjct: 112 WVYTPLSLI 120


>sp|Q8ERS9|PPNK1_OCEIH Probable inorganic polyphosphate/ATP-NAD
           kinase 1 OS=Oceanobacillus iheyensis GN=ppnK1 PE=3 SV=1
          Length = 267

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
 Frame = +1

Query: 286 PQADDTHLSKNT--RSRFFRTDGREGFSLIYQTLPFVVVAILSFLVIELRAFIRSKESMP 459
           P  +   +++N    +R FRT G       + T  F+   + S  +I++  F ++ +++ 
Sbjct: 175 PSLEAIQITENASINNRVFRTIGSPLILPKHHTC-FLKPMVDSSFLIQIDHFTKNYQNVK 233

Query: 460 SIQ---AQQKLRFSSLNAYPLW 516
           SIQ   A++K+RF+    +P W
Sbjct: 234 SIQCRVAKEKVRFARFKQFPFW 255
tr_hit_id Q9FLW3
Definition tr|Q9FLW3|Q9FLW3_ARATH FRO2 homolog OS=Arabidopsis thaliana
Align length 115
Score (bit) 37.7
E-value 0.47
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK957092|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0027_H09, 5'
         (580 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9FLW3|Q9FLW3_ARATH FRO2 homolog OS=Arabidopsis thaliana PE=4...    38   0.47 
tr|Q8W110|Q8W110_ARATH AT5g23980/MZF18_14 OS=Arabidopsis thalian...    37   1.0  
tr|Q6PND7|Q6PND7_CUCSA Ferric reductase OS=Cucumis sativus PE=2 ...    36   1.4  
tr|Q9LMM2|Q9LMM2_ARATH F22L4.13 protein OS=Arabidopsis thaliana ...    35   4.0  
tr|P92950|P92950_ARATH FRO1 protein OS=Arabidopsis thaliana GN=F...    35   4.0  
tr|Q8RWS6|Q8RWS6_ARATH Putative FRO2; NADPH oxidase OS=Arabidops...    33   8.8  

>tr|Q9FLW3|Q9FLW3_ARATH FRO2 homolog OS=Arabidopsis thaliana PE=4
           SV=1
          Length = 703

 Score = 37.7 bits (86), Expect = 0.47
 Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 8/115 (6%)
 Frame = +1

Query: 250 LMWVLYWFF--------KPEPQADDTHLSKNTRSRFFRTDGREGFSLIYQTLPFVVVAIL 405
           L W+L W          K  P+     LSK   + +F   G +G +L+  T+P + +A+L
Sbjct: 17  LGWILVWIMISTNLFKSKWTPK-----LSKYLNTTYF---GPQGTNLVLLTVPMMFIAVL 68

Query: 406 SFLVIELRAFIRSKESMPSIQAQQKLRFSSLNAYPLWVHSPFGVVTMAEFFSSLL 570
           S + +     IR+K S   +   ++ +   +    + V +P G+VT  E   SLL
Sbjct: 69  SCVYLH----IRNKLSQSYLYECREWKLKRIMGRVIMVMNPLGIVTATELTFSLL 119


>tr|Q8W110|Q8W110_ARATH AT5g23980/MZF18_14 OS=Arabidopsis thaliana
           GN=At5g23980 PE=2 SV=1
          Length = 699

 Score = 36.6 bits (83), Expect = 1.0
 Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 8/115 (6%)
 Frame = +1

Query: 250 LMWVLYWFF--------KPEPQADDTHLSKNTRSRFFRTDGREGFSLIYQTLPFVVVAIL 405
           L W+L W          K  P+     LSK   + +F   G +G +L+  T+P + +A+L
Sbjct: 17  LGWILVWIMISTNLFKSKWTPK-----LSKYLNTTYF---GPQGTNLVLLTVPMMFIAVL 68

Query: 406 SFLVIELRAFIRSKESMPSIQAQQKLRFSSLNAYPLWVHSPFGVVTMAEFFSSLL 570
           S + +     I+ K + P    Q++ +   +    + V +P G+VT  E   SLL
Sbjct: 69  SCVYLH----IQKKPTQP----QREWKLKRIMGRVIMVMNPLGIVTATELTFSLL 115


>tr|Q6PND7|Q6PND7_CUCSA Ferric reductase OS=Cucumis sativus PE=2
           SV=1
          Length = 694

 Score = 36.2 bits (82), Expect = 1.4
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
 Frame = +1

Query: 250 LMWVLYWFFKPEPQADDTHLSKNTRSRFFRTD--GREGFSLIYQTLPFVVVAILSFLVIE 423
           L W+  W   P        L K  R + +++   G EG SL+  T P + +AIL  +   
Sbjct: 20  LGWIFLWVMMPTNTYRKKWLPK-VREKSYKSTYFGSEGTSLLMYTFPILFIAILGCVYNH 78

Query: 424 LRAFIRSKESMPSIQAQQKLRFSSLNAY--PLWVHSPFGVVTMAE 552
           L      K S P+++ ++  +   L  +  P  V  P G+V+  E
Sbjct: 79  L----EKKRSDPNVKTRKGTKHHGLAMWKQPAIVKGPLGIVSWTE 119


>tr|Q9LMM2|Q9LMM2_ARATH F22L4.13 protein OS=Arabidopsis thaliana
           GN=At1g01590 PE=4 SV=1
          Length = 704

 Score = 34.7 bits (78), Expect = 4.0
 Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
 Frame = +1

Query: 346 GREGFSLIYQTLPFVVVAILSFLVIELRAFIRSKESMPSIQAQQKLRFSSLNAYPLWVHS 525
           GR G +L+    P +++A L  + + L+      +    ++ +++ +F +L   P+ V+ 
Sbjct: 57  GRPGVNLLVYMFPMILLAFLGCIYLHLKKSTTVNQFNSGVE-KKRAKFGALRR-PMLVNG 114

Query: 526 PFGVVTMAE-----FFSSLLAYS 579
           P G+VT+ E      F +LL +S
Sbjct: 115 PLGIVTVTEVMFLTMFMALLLWS 137


>tr|P92950|P92950_ARATH FRO1 protein OS=Arabidopsis thaliana GN=FRO1
           PE=4 SV=1
          Length = 704

 Score = 34.7 bits (78), Expect = 4.0
 Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
 Frame = +1

Query: 346 GREGFSLIYQTLPFVVVAILSFLVIELRAFIRSKESMPSIQAQQKLRFSSLNAYPLWVHS 525
           GR G +L+    P +++A L  + + L+      +    ++ +++ +F +L   P+ V+ 
Sbjct: 57  GRPGVNLLVYMFPMILLAFLGCIYLHLKKSTTVNQFNSGVE-KKRAKFGALRR-PMLVNG 114

Query: 526 PFGVVTMAE-----FFSSLLAYS 579
           P G+VT+ E      F +LL +S
Sbjct: 115 PLGIVTVTEVMFLTMFMALLLWS 137


>tr|Q8RWS6|Q8RWS6_ARATH Putative FRO2; NADPH oxidase OS=Arabidopsis
           thaliana GN=At5g49730 PE=2 SV=1
          Length = 738

 Score = 33.5 bits (75), Expect = 8.8
 Identities = 27/105 (25%), Positives = 49/105 (46%)
 Frame = +1

Query: 256 WVLYWFFKPEPQADDTHLSKNTRSRFFRTDGREGFSLIYQTLPFVVVAILSFLVIELRAF 435
           WV++       Q  D  L+  +   F  T G     LI+ + P +V+++L+ L +     
Sbjct: 39  WVVFLMMMYPEQLGDDFLTFVSSKTFLGTTGT--MFLIF-SCPILVISVLASLYL----I 91

Query: 436 IRSKESMPSIQAQQKLRFSSLNAYPLWVHSPFGVVTMAEFFSSLL 570
           I  ++ + + +   K     L  +P+ V  PFGVV+ AEF   ++
Sbjct: 92  ISGEDKVFTKKKISKFPRFRLWTFPVLVDGPFGVVSAAEFLGIMV 136