DK957093 |
Clone id |
TST39A01NGRL0027_H10 |
Library |
TST39 |
Length |
550 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0027_H10. 5' end sequence. |
Accession |
DK957093 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL745Contig1 |
Sequence |
CTCACTCTGTAGCATCATTCAGCCCTTCTCTGTAGCGCGCCGGCTGCGCGCCTCATCGCT ACAGCTTGCATTACCGCAAGGCCTGCAAGCCCAATTGCCCAGGCCTGCGTGTCACTAGCA GCTGCTTCATCATGCCTCCCCTGGTGATAGATAATTTTCCATCGACTCCTGGTAAAGTGA AAGTAGAGAGGAGCAATTATTTCGGCCGCATGTCACATCATTGGCAGTCCTCGTCGCTGG CCAATCCACTTCTTTGGCTTTTTGGACTTGCAAGCCTCGCTGTTGTCTTAGTGGTTCTGT TGAATTCTTTAGATGGCTACAAGGCCGTCCACATTAGCTCTACATGGGGAGGCGCACAGT GGGAAAAGCAGGTCCGGCTGTCAGCTCATCGCAAAAGAAGTGATAACAAAGTGGTGCTGG TAACAGGGGCAGCTGGTTTTGTGGGAATGCATGTCTCTCTTGCGCTGCGGAAACGAGGAG ATGGTGTTGTTGGACTCGACAATTTCAATAGCTACTACGATCCTTCCTTGGAAAAGGGCA AGGCGGAAAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9M0B6 |
Definition |
sp|Q9M0B6|GAE1_ARATH UDP-glucuronate 4-epimerase 1 OS=Arabidopsis thaliana |
Align length |
137 |
Score (bit) |
124.0 |
E-value |
3.0e-28 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RZV8 |
Definition |
tr|A9RZV8|A9RZV8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
140 |
Score (bit) |
136.0 |
E-value |
6.0e-31 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957093|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0027_H10, 5' (550 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RZV8|A9RZV8_PHYPA Predicted protein OS=Physcomitrella paten... 136 6e-31 tr|A9SSQ9|A9SSQ9_PHYPA Predicted protein OS=Physcomitrella paten... 129 1e-28 tr|A9SLN5|A9SLN5_PHYPA Predicted protein OS=Physcomitrella paten... 128 2e-28 tr|A9RIM4|A9RIM4_PHYPA Predicted protein OS=Physcomitrella paten... 127 5e-28 tr|A9RD94|A9RD94_PHYPA Predicted protein OS=Physcomitrella paten... 127 5e-28 tr|B8LKW2|B8LKW2_PICSI Putative uncharacterized protein OS=Picea... 124 2e-27 tr|A9S3V6|A9S3V6_PHYPA Predicted protein OS=Physcomitrella paten... 120 4e-26 tr|Q6K9M5|Q6K9M5_ORYSJ Os02g0791500 protein OS=Oryza sativa subs... 118 2e-25 tr|A2XAG1|A2XAG1_ORYSI Putative uncharacterized protein OS=Oryza... 118 2e-25 tr|A9S6M5|A9S6M5_PHYPA Predicted protein OS=Physcomitrella paten... 117 4e-25 tr|B6SI92|B6SI92_MAIZE Putative uncharacterized protein OS=Zea m... 117 5e-25 tr|A9TRM1|A9TRM1_PHYPA Predicted protein OS=Physcomitrella paten... 117 5e-25 tr|A5B5D4|A5B5D4_VITVI Putative uncharacterized protein OS=Vitis... 115 1e-24 tr|Q304Y2|Q304Y2_MAIZE UDP-glucuronic acid 4-epimerase OS=Zea ma... 114 3e-24 tr|B4F9K7|B4F9K7_MAIZE Putative uncharacterized protein OS=Zea m... 114 3e-24 tr|A7PYE9|A7PYE9_VITVI Chromosome chr15 scaffold_37, whole genom... 107 3e-22 tr|A9TFC1|A9TFC1_PHYPA Predicted protein OS=Physcomitrella paten... 106 7e-22 tr|A7PYE8|A7PYE8_VITVI Chromosome chr15 scaffold_37, whole genom... 106 9e-22 tr|A7PYE7|A7PYE7_VITVI Chromosome chr15 scaffold_37, whole genom... 106 9e-22 tr|Q69KM5|Q69KM5_ORYSJ Putative uridine diphosphate galacturonat... 105 2e-21 tr|A2YA44|A2YA44_ORYSI Putative uncharacterized protein OS=Oryza... 105 2e-21 tr|A5C3Y4|A5C3Y4_VITVI Putative uncharacterized protein OS=Vitis... 105 2e-21 tr|A9NXH8|A9NXH8_PICSI Putative uncharacterized protein OS=Picea... 104 3e-21 tr|Q2MJA7|Q2MJA7_ORYSJ Os03g0249500 protein OS=Oryza sativa subs... 101 3e-20 tr|A9P9K8|A9P9K8_POPTR Putative uncharacterized protein OS=Popul... 99 1e-19 tr|B6SPN6|B6SPN6_MAIZE Protein capI OS=Zea mays PE=2 SV=1 98 2e-19 tr|Q84QV1|Q84QV1_ORYSJ Putative type 1 capsule synthesis gene(Ca... 97 4e-19 tr|Q2MJA8|Q2MJA8_ORYSJ Os08g0526100 protein OS=Oryza sativa subs... 97 4e-19 tr|B8B8V7|B8B8V7_ORYSI Putative uncharacterized protein OS=Oryza... 97 4e-19 tr|A3BV16|A3BV16_ORYSJ Putative uncharacterized protein OS=Oryza... 97 4e-19
>tr|A9RZV8|A9RZV8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_179857 PE=4 SV=1 Length = 441
Score = 136 bits (343), Expect = 6e-31 Identities = 77/140 (55%), Positives = 89/140 (63%), Gaps = 1/140 (0%) Frame = +3
Query: 132 MPPLVIDNFPSTPGKVKVERSNYFGRMSHHWQSSSLANPLLWLFGXXXXXXXXXXXXXXX 311 MPP V+D FPSTPGKVK+ERSNYFGR+ W SS A LL L Sbjct: 1 MPPSVLDEFPSTPGKVKMERSNYFGRVGSRWHSSVSAK-LLCLTSILLLLTISAFFWVSS 59
Query: 312 DGYKAVHISSTWGGAQWEKQVRLSAHRKRSDNK-VVLVTGAAGFVGMHVSLALRKRGDGV 488 G + + +WEK+VR S +R DN VVLVTGAAGFVG HVSLALRKRGDGV Sbjct: 60 AGIDSQRPPTFQRSHEWEKRVRQSCLPRREDNPLVVLVTGAAGFVGSHVSLALRKRGDGV 119
Query: 489 VGLDNFNSYYDPSLEKGKAE 548 VGLDNFNSYY+ SL++ + E Sbjct: 120 VGLDNFNSYYEVSLKRARQE 139
>tr|A9SSQ9|A9SSQ9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_166362 PE=4 SV=1 Length = 450
Score = 129 bits (323), Expect = 1e-28 Identities = 76/154 (49%), Positives = 96/154 (62%), Gaps = 15/154 (9%) Frame = +3
Query: 132 MPPLVI-DNFPSTPGKVKVERSNYFGRMSHHWQSSSLANPLLWLFGXXXXXXXXXXXXXX 308 MPP V+ D+FPSTPGKVKVERS+YFGR++ W S++ A LL Sbjct: 1 MPPSVVQDSFPSTPGKVKVERSSYFGRVASRWHSTASAR-LLVFSAFLLAVTIFICFRIA 59
Query: 309 XDGYKAVHI-----SSTWGGA---------QWEKQVRLSAHRKRSDNKVVLVTGAAGFVG 446 +G+ V+I SST GG W+K+VR S KR + VVLVTGAAGFVG Sbjct: 60 ANGFVDVYIGGTAYSSTNGGTIRSAYRSDHLWDKKVRQSCTPKRENGLVVLVTGAAGFVG 119
Query: 447 MHVSLALRKRGDGVVGLDNFNSYYDPSLEKGKAE 548 HVSLAL+KRGDG+VG+DNFN YY+ SL++ + E Sbjct: 120 SHVSLALKKRGDGLVGIDNFNDYYEVSLKRARQE 153
>tr|A9SLN5|A9SLN5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_165615 PE=4 SV=1 Length = 446
Score = 128 bits (322), Expect = 2e-28 Identities = 69/149 (46%), Positives = 92/149 (61%), Gaps = 12/149 (8%) Frame = +3
Query: 132 MPPLVIDNFPSTPGKVKVERSNYFGRMSHHWQSSSLANPLLW---LFGXXXXXXXXXXXX 302 M P + DNFPSTPGKVK+ERSNYFGR+++ W +S+ A L+ L Sbjct: 1 MAPSIQDNFPSTPGKVKMERSNYFGRVTNRWHTSASAKLFLFSVFLLAVTIFICFRITAN 60
Query: 303 XXXDGYKAVHISSTWGGA---------QWEKQVRLSAHRKRSDNKVVLVTGAAGFVGMHV 455 +GY + +ST GG W++++ S +R D VVLVTGAAGFVG HV Sbjct: 61 GMVEGYMSTAYTSTNGGTIRSAFKSDKVWDQKLLQSCTPERDDGLVVLVTGAAGFVGSHV 120
Query: 456 SLALRKRGDGVVGLDNFNSYYDPSLEKGK 542 SLAL+KRGDG+VG+DNFN YY+ SL++ + Sbjct: 121 SLALKKRGDGLVGIDNFNDYYEVSLKRAR 149
>tr|A9RIM4|A9RIM4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_55414 PE=4 SV=1 Length = 446
Score = 127 bits (318), Expect = 5e-28 Identities = 72/144 (50%), Positives = 86/144 (59%), Gaps = 5/144 (3%) Frame = +3
Query: 132 MPPLVI-DNFPSTPGKVKVERSNYFGRMSHHWQSSSLANPLLW---LFGXXXXXXXXXXX 299 MPP + D+FPSTPGKVKV+RSNY GRM+ W SS+ L L Sbjct: 1 MPPSAVQDDFPSTPGKVKVDRSNYLGRMTSRWHSSTATKILCTTSILLALTIFAVLWMGL 60
Query: 300 XXXXDGYKAVHISSTWGGAQWEKQVRLSAHRKRSDNKV-VLVTGAAGFVGMHVSLALRKR 476 +GY +WEK+V S R DN + VLVTGAAGFVG HVSLAL+KR Sbjct: 61 PRGSEGYSGQRTQGFQRSHEWEKKVIHSCVTNREDNALTVLVTGAAGFVGTHVSLALKKR 120
Query: 477 GDGVVGLDNFNSYYDPSLEKGKAE 548 GDGVVGLDNFNSYY+ SL++ + E Sbjct: 121 GDGVVGLDNFNSYYEVSLKRARQE 144
>tr|A9RD94|A9RD94_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_55001 PE=4 SV=1 Length = 446
Score = 127 bits (318), Expect = 5e-28 Identities = 70/144 (48%), Positives = 91/144 (63%), Gaps = 5/144 (3%) Frame = +3
Query: 132 MPPLVI-DNFPSTPGKVKVERSNYFGRMSHHWQSSSLANPLLW---LFGXXXXXXXXXXX 299 MPP + D+FPSTPGKVK+++ NYFGR++ W SS+LA L L Sbjct: 1 MPPSTVQDDFPSTPGKVKMDKGNYFGRVTSRWHSSALAKLLCITSILLALTVSVFLWMSL 60
Query: 300 XXXXDGYKAVHISSTWGGAQWEKQVRLSAHRKRSDNKV-VLVTGAAGFVGMHVSLALRKR 476 GY ++ + +WE++V S R+DN + VLVTGAAGFVG HVSLAL+KR Sbjct: 61 PRGSQGYGSLKVQVFQRNHEWERKVIHSGSPNRNDNALTVLVTGAAGFVGTHVSLALKKR 120
Query: 477 GDGVVGLDNFNSYYDPSLEKGKAE 548 GDGVVGLDNFNSYY+ SL++ + E Sbjct: 121 GDGVVGLDNFNSYYEVSLKRARQE 144
>tr|B8LKW2|B8LKW2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 437
Score = 124 bits (312), Expect = 2e-27 Identities = 69/132 (52%), Positives = 81/132 (61%), Gaps = 1/132 (0%) Frame = +3
Query: 150 DNFPSTPGKVKVERSN-YFGRMSHHWQSSSLANPLLWLFGXXXXXXXXXXXXXXXDGYKA 326 D FPSTPGKVK+ERSN YFGR S WQSS +A W + Sbjct: 11 DAFPSTPGKVKMERSNIYFGRGSTRWQSS-VAKLFFWTVVVVGLIVIFFMRSSSPVETRR 69
Query: 327 VHISSTWGGAQWEKQVRLSAHRKRSDNKVVLVTGAAGFVGMHVSLALRKRGDGVVGLDNF 506 + + WGG WEK+VR S K VVLVTGAAGFVG HVSLAL++RGDGV+GLDNF Sbjct: 70 LLSTPHWGGHDWEKRVRYSCRVKTEKGIVVLVTGAAGFVGSHVSLALKRRGDGVLGLDNF 129
Query: 507 NSYYDPSLEKGK 542 N YYD SL++ + Sbjct: 130 NDYYDQSLKRAR 141
>tr|A9S3V6|A9S3V6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_56808 PE=4 SV=1 Length = 450
Score = 120 bits (302), Expect = 4e-26 Identities = 73/156 (46%), Positives = 92/156 (58%), Gaps = 17/156 (10%) Frame = +3
Query: 132 MPPLVI-DNFPSTPGKVKVERSNYFGRMSHHWQSSSLANPL----------LWLF----G 266 MPP + DN+PSTPGKVKVERSNYFGR++ W +++ L L++F G Sbjct: 1 MPPSTMHDNYPSTPGKVKVERSNYFGRVASRWHTTASTRLLACTAVLLTLTLFVFYRMSG 60
Query: 267 XXXXXXXXXXXXXXXDGYKAVHISSTWGGAQWEKQVRLSAHRKRSDNK--VVLVTGAAGF 440 +K H QWE +VR S KRS+ + VVLVTGAAGF Sbjct: 61 TSGGAIDGGIVGRSVAAFKPTH--------QWELKVRQSCLPKRSEEEAMVVLVTGAAGF 112
Query: 441 VGMHVSLALRKRGDGVVGLDNFNSYYDPSLEKGKAE 548 VG HVSLAL+KRGDGVVGLDNFN YY+ SL++ + + Sbjct: 113 VGTHVSLALKKRGDGVVGLDNFNDYYETSLKRARQD 148
>tr|Q6K9M5|Q6K9M5_ORYSJ Os02g0791500 protein OS=Oryza sativa subsp. japonica GN=OJ1249_F12.2 PE=2 SV=1 Length = 437
Score = 118 bits (295), Expect = 2e-25 Identities = 65/137 (47%), Positives = 81/137 (59%), Gaps = 6/137 (4%) Frame = +3
Query: 150 DNFPSTPGKVKVERSNYFGRMSHHWQSSSLANPLLWLFGXXXXXXXXXXXXXXXDGYKAV 329 D FPSTPGKVK+ER+ R H +S+ + LW D + Sbjct: 7 DMFPSTPGKVKIERATAMNRQLHRCFAST-STMFLWALFLVAMTASYLSFQSFVDT-SSK 64
Query: 330 HISSTWGGAQWEKQVRLSAHRKRSDNKV------VLVTGAAGFVGMHVSLALRKRGDGVV 491 + +++WGG WE+Q+R SA +R VLVTGAAGFVG H SLALRKRGDGVV Sbjct: 65 YFAASWGGLHWERQIRASAAPRRPPGSAAGAGMSVLVTGAAGFVGTHCSLALRKRGDGVV 124
Query: 492 GLDNFNSYYDPSLEKGK 542 G+DNFNSYYDPSL+K + Sbjct: 125 GIDNFNSYYDPSLKKAR 141
>tr|A2XAG1|A2XAG1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_09239 PE=4 SV=1 Length = 437
Score = 118 bits (295), Expect = 2e-25 Identities = 65/137 (47%), Positives = 81/137 (59%), Gaps = 6/137 (4%) Frame = +3
Query: 150 DNFPSTPGKVKVERSNYFGRMSHHWQSSSLANPLLWLFGXXXXXXXXXXXXXXXDGYKAV 329 D FPSTPGKVK+ER+ R H +S+ + LW D + Sbjct: 7 DMFPSTPGKVKIERATAMNRQLHRCFAST-STMFLWALFLVAMTASYLSFQSFVDT-SSK 64
Query: 330 HISSTWGGAQWEKQVRLSAHRKRSDNKV------VLVTGAAGFVGMHVSLALRKRGDGVV 491 + +++WGG WE+Q+R SA +R VLVTGAAGFVG H SLALRKRGDGVV Sbjct: 65 YFAASWGGLHWERQIRASAAPRRPPGSAAGAGMSVLVTGAAGFVGTHCSLALRKRGDGVV 124
Query: 492 GLDNFNSYYDPSLEKGK 542 G+DNFNSYYDPSL+K + Sbjct: 125 GIDNFNSYYDPSLKKAR 141
>tr|A9S6M5|A9S6M5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_163131 PE=4 SV=1 Length = 446
Score = 117 bits (293), Expect = 4e-25 Identities = 67/151 (44%), Positives = 88/151 (58%), Gaps = 12/151 (7%) Frame = +3
Query: 132 MPPLVIDNFPSTPGKVKVERSNYFGRMSHHWQSSSLANPL---LWLFGXXXXXXXXXXXX 302 M P V ++FPSTPGK K+ER+N+FGR + W +S+ A ++L Sbjct: 1 MAPSVQEDFPSTPGKGKMERNNFFGRAASRWHTSASAKLFALSVFLLVITIFICFRITGN 60
Query: 303 XXXDGYKAVHISSTWGGA---------QWEKQVRLSAHRKRSDNKVVLVTGAAGFVGMHV 455 DGY SST GG W+ +V S +R + VVLVTGAAGFVG HV Sbjct: 61 GMIDGYITSAYSSTNGGTLLPAFKSDHAWDLKVAQSCTPERENGLVVLVTGAAGFVGSHV 120
Query: 456 SLALRKRGDGVVGLDNFNSYYDPSLEKGKAE 548 SLAL+KRGDG+VG+DNFN YY+ SL++ + E Sbjct: 121 SLALKKRGDGLVGIDNFNDYYEVSLKRARQE 151
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