DK957103 |
Clone id |
TST39A01NGRL0027_H20 |
Library |
TST39 |
Length |
489 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0027_H20. 5' end sequence. |
Accession |
DK957103 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL30Contig1 |
Sequence |
CATGGCTGCAGCTACCGCATCCTCCCTCACGGCCGCCTGTGTCTCCTCCCTCTCTGCCCA CTCCTCCACCTCCCCTGCCCCAGATCACATCAATTGCTCCTCTCCTTTCGCCAAATTCTC GGGTCTCAAGCTAGCCTCCTCCCCGCTTCCTTCCCACCACACCCAAGAGAAGAAGAAGAG AAGCAGTGGCAGCAGGAAGGCGCATCATGTCACTGCAACGGCAGCCGTGGAGGCTCCCCC CAAGACCGATGTCTCGTTGGTGGAGAAGAGCATCAATACTATCCGATTCTTGGCCGTTGA TGCAGTTGAGAAGGCTAACTCTGGACACCCAGGTCTTCCCATGGGGTGTGCTCCGATGGG CCACATTCTGTATGACGAGATCATGAGATACAACCCAAAAAATCCCTATTGGTTCAATCG CGACAGGTTCGTCCTTTCTGCGGGCCATGGTTGCATGTTGCAGTATGCACTTCTTCATCT TGCCGGCTA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q43848 |
Definition |
sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tuberosum |
Align length |
130 |
Score (bit) |
171.0 |
E-value |
2.0e-42 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957103|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0027_H20, 5' (489 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tub... 171 2e-42 sp|O20250|TKTC_SPIOL Transketolase, chloroplastic OS=Spinacia ol... 166 5e-41 sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays PE... 163 3e-40 sp|Q42677|TKT7_CRAPL Transketolase 7 OS=Craterostigma plantagine... 155 7e-38 sp|Q42675|TKTA_CRAPL Transketolase 10 OS=Craterostigma plantagin... 142 8e-34 sp|Q8YRU9|TKT_ANASP Transketolase OS=Anabaena sp. (strain PCC 71... 130 4e-30 sp|Q9KAD7|TKT_BACHD Transketolase OS=Bacillus halodurans GN=tkt ... 110 3e-24 sp|P45694|TKT_BACSU Transketolase OS=Bacillus subtilis GN=tkt PE... 110 4e-24 sp|O67642|TKT_AQUAE Transketolase OS=Aquifex aeolicus GN=tkt PE=... 108 1e-23 sp|P51010|TKT_XANFL Transketolase OS=Xanthobacter flavus GN=cbbT... 106 5e-23 sp|P22976|TKT_STRPN Probable transketolase OS=Streptococcus pneu... 104 2e-22 sp|O83571|TKT_TREPA Transketolase OS=Treponema pallidum GN=tkt P... 104 2e-22 sp|Q9URM2|TKT_SCHPO Probable transketolase OS=Schizosaccharomyce... 103 5e-22 sp|Q12630|TKT1_KLULA Transketolase OS=Kluyveromyces lactis GN=TK... 100 3e-21 sp|Q8CPC7|TKT_STAES Transketolase OS=Staphylococcus epidermidis ... 100 4e-21 sp|Q5HPJ9|TKT_STAEQ Transketolase OS=Staphylococcus epidermidis ... 100 4e-21 sp|Q89AY2|TKT_BUCBP Transketolase OS=Buchnera aphidicola subsp. ... 100 5e-21 sp|Q8NZX4|TKT_STRP8 Transketolase OS=Streptococcus pyogenes sero... 100 6e-21 sp|Q5XAK5|TKT_STRP6 Transketolase OS=Streptococcus pyogenes sero... 100 6e-21 sp|P57958|TKT2_PASMU Transketolase 2 OS=Pasteurella multocida GN... 100 6e-21 sp|P57927|TKT1_PASMU Transketolase 1 OS=Pasteurella multocida GN... 100 6e-21 sp|P21725|TKTC_RALEH Transketolase, chromosomal OS=Ralstonia eut... 99 8e-21 sp|P66963|TKT_STAAW Transketolase OS=Staphylococcus aureus (stra... 99 1e-20 sp|Q6G9L6|TKT_STAAS Transketolase OS=Staphylococcus aureus (stra... 99 1e-20 sp|Q6GH64|TKT_STAAR Transketolase OS=Staphylococcus aureus (stra... 99 1e-20 sp|P99161|TKT_STAAN Transketolase OS=Staphylococcus aureus (stra... 99 1e-20 sp|P66962|TKT_STAAM Transketolase OS=Staphylococcus aureus (stra... 99 1e-20 sp|Q5HG77|TKT_STAAC Transketolase OS=Staphylococcus aureus (stra... 99 1e-20 sp|P23254|TKT1_YEAST Transketolase 1 OS=Saccharomyces cerevisiae... 98 2e-20 sp|P21726|TKTP_RALEH Transketolase, plasmid OS=Ralstonia eutroph... 97 4e-20
>sp|Q43848|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tuberosum PE=2 SV=1 Length = 741
Score = 171 bits (433), Expect = 2e-42 Identities = 85/130 (65%), Positives = 98/130 (75%) Frame = +2
Query: 98 SSPFAKFSGLKLASSPLPSHHTQEKKKRSSGSRXXXXXXXXXXXXXXXXTDVSLVEKSIN 277 S F+ FSGLK S+P S H + ++ ++ TD ++VEKS+N Sbjct: 30 SLSFSTFSGLK--STPFTSSHRRILPS-TTVTKQQFSVRASAAVETLEKTDAAIVEKSVN 86
Query: 278 TIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVLSAGHGCM 457 TIRFLA+DAVEKANSGHPGLPMGCAPMGHILYDE+M+YNPKNPYWFNRDRFVLSAGHGCM Sbjct: 87 TIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDEVMKYNPKNPYWFNRDRFVLSAGHGCM 146
Query: 458 LQYALLHLAG 487 LQYALLHLAG Sbjct: 147 LQYALLHLAG 156
>sp|O20250|TKTC_SPIOL Transketolase, chloroplastic OS=Spinacia oleracea PE=1 SV=1 Length = 741
Score = 166 bits (420), Expect = 5e-41 Identities = 77/82 (93%), Positives = 80/82 (97%), Gaps = 1/82 (1%) Frame = +2
Query: 245 TDVS-LVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNR 421 TD+ LVEKS+NTIRFLA+DAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNR Sbjct: 75 TDIDQLVEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNR 134
Query: 422 DRFVLSAGHGCMLQYALLHLAG 487 DRFVLSAGHGCMLQYALLHLAG Sbjct: 135 DRFVLSAGHGCMLQYALLHLAG 156
>sp|Q7SIC9|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays PE=1 SV=1 Length = 675
Score = 163 bits (413), Expect = 3e-40 Identities = 72/77 (93%), Positives = 77/77 (100%) Frame = +2
Query: 257 LVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVL 436 L+EKS+NTIRFLA+DAVEKANSGHPGLPMGCAPMGH+LYDE+MRYNPKNPYWFNRDRFVL Sbjct: 15 LLEKSVNTIRFLAIDAVEKANSGHPGLPMGCAPMGHVLYDEVMRYNPKNPYWFNRDRFVL 74
Query: 437 SAGHGCMLQYALLHLAG 487 SAGHGCMLQYALLHLAG Sbjct: 75 SAGHGCMLQYALLHLAG 91
>sp|Q42677|TKT7_CRAPL Transketolase 7 OS=Craterostigma plantagineum GN=TKT7 PE=2 SV=1 Length = 676
Score = 155 bits (393), Expect = 7e-38 Identities = 68/77 (88%), Positives = 74/77 (96%) Frame = +2
Query: 257 LVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVL 436 LV KS+NTIRFLA+DAVEKA SGHPG+PMGCAPMGH+LYDE MR+NPKNPYWFNRDRFVL Sbjct: 13 LVSKSVNTIRFLAIDAVEKAKSGHPGMPMGCAPMGHVLYDEFMRFNPKNPYWFNRDRFVL 72
Query: 437 SAGHGCMLQYALLHLAG 487 SAGHGCMLQYALLHL+G Sbjct: 73 SAGHGCMLQYALLHLSG 89
>sp|Q42675|TKTA_CRAPL Transketolase 10 OS=Craterostigma plantagineum GN=TKT10 PE=2 SV=1 Length = 679
Score = 142 bits (358), Expect = 8e-34 Identities = 62/77 (80%), Positives = 69/77 (89%) Frame = +2
Query: 257 LVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVL 436 LV KS+NTIRFLA+DAVE SGHPG+PMGCAPMGH+L+DE M++NPKNPYWFNRDRFVL Sbjct: 17 LVVKSVNTIRFLAIDAVENVKSGHPGMPMGCAPMGHVLFDEFMKFNPKNPYWFNRDRFVL 76
Query: 437 SAGHGCMLQYALLHLAG 487 SAGHG ML Y LLHLAG Sbjct: 77 SAGHGAMLLYGLLHLAG 93
>sp|Q8YRU9|TKT_ANASP Transketolase OS=Anabaena sp. (strain PCC 7120) GN=tkt PE=1 SV=1 Length = 670
Score = 130 bits (326), Expect = 4e-30 Identities = 61/78 (78%), Positives = 66/78 (84%) Frame = +2
Query: 254 SLVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFV 433 SL E SIN IRFLAVDA+EKA SGHPGLPMG APM +L++ MRYNPKNP WFNRDRFV Sbjct: 7 SLEELSINAIRFLAVDAIEKAKSGHPGLPMGAAPMAFVLWNRFMRYNPKNPKWFNRDRFV 66
Query: 434 LSAGHGCMLQYALLHLAG 487 LSAGHG MLQYALL+L G Sbjct: 67 LSAGHGSMLQYALLYLTG 84
>sp|Q9KAD7|TKT_BACHD Transketolase OS=Bacillus halodurans GN=tkt PE=3 SV=1 Length = 666
Score = 110 bits (275), Expect = 3e-24 Identities = 49/73 (67%), Positives = 59/73 (80%) Frame = +2
Query: 269 SINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVLSAGH 448 ++NTIR L++D+VEKANSGHPG+PMG APM L+ + M +NP NP W NRDRFVLSAGH Sbjct: 9 AVNTIRTLSIDSVEKANSGHPGMPMGAAPMAFCLWTKFMNHNPANPDWVNRDRFVLSAGH 68
Query: 449 GCMLQYALLHLAG 487 G ML Y+LLHL G Sbjct: 69 GSMLLYSLLHLTG 81
>sp|P45694|TKT_BACSU Transketolase OS=Bacillus subtilis GN=tkt PE=3 SV=2 Length = 667
Score = 110 bits (274), Expect = 4e-24 Identities = 48/78 (61%), Positives = 63/78 (80%) Frame = +2
Query: 254 SLVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFV 433 ++ +KS+ TIR L++DA+EKANSGHPG+PMG APM + L+ + M +P NP WFNRDRFV Sbjct: 3 TIEKKSVATIRTLSIDAIEKANSGHPGMPMGAAPMAYTLWTKFMNVSPANPGWFNRDRFV 62
Query: 434 LSAGHGCMLQYALLHLAG 487 LSAGHG L Y++LHL+G Sbjct: 63 LSAGHGSALLYSMLHLSG 80
>sp|O67642|TKT_AQUAE Transketolase OS=Aquifex aeolicus GN=tkt PE=3 SV=1 Length = 689
Score = 108 bits (271), Expect = 1e-23 Identities = 48/81 (59%), Positives = 62/81 (76%) Frame = +2
Query: 245 TDVSLVEKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRD 424 T + E INTIRFL+VD VE+A SGHPG+P+G + + ++LYD IM+YNPKNP WFNRD Sbjct: 29 TSKKIDELVINTIRFLSVDMVERAKSGHPGMPLGASHIVYLLYDRIMKYNPKNPNWFNRD 88
Query: 425 RFVLSAGHGCMLQYALLHLAG 487 RF+LSAGHG + YA ++ G Sbjct: 89 RFILSAGHGSAMLYAAFYMFG 109
>sp|P51010|TKT_XANFL Transketolase OS=Xanthobacter flavus GN=cbbT PE=3 SV=2 Length = 668
Score = 106 bits (265), Expect = 5e-23 Identities = 46/75 (61%), Positives = 61/75 (81%) Frame = +2
Query: 263 EKSINTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEIMRYNPKNPYWFNRDRFVLSA 442 ++ N IRFLA+DAVE ANSGHPGLPMG A + +L+ ++++Y+P P+W +RDRFVLSA Sbjct: 13 DRLANAIRFLAIDAVEAANSGHPGLPMGAADIATVLFTKVLKYDPSRPFWPDRDRFVLSA 72
Query: 443 GHGCMLQYALLHLAG 487 GHG ML Y++LHLAG Sbjct: 73 GHGSMLLYSVLHLAG 87
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9P7Z7 |
Definition |
tr|A9P7Z7|A9P7Z7_POPTR Putative uncharacterized protein OS=Populus trichocarpa |
Align length |
124 |
Score (bit) |
173.0 |
E-value |
3.0e-42 |
Report |
|