DK957107 [AcEST]

DK957107
Clone id	TST39A01NGRL0027_H24
Library	TST39
Length	623
Definition	Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0027_H24. 5' end sequence.
Accession	DK957107
Tissue type	prothallia with plantlets
Developmental stage	gametophytes with sporophytes
Contig ID	CL912Contig1
Sequence	CTTCTGCTCTTTTGCTTCCCTGTCCGCAAGCTTGCACGCAATTTCGTTTTCGTCAAGGCA CCACACACGCGGGCGCGTGCACTTAGTCACACGCACTTACACGCAAACTCTCTCACTCTT TCTCCCTCAACTGCCCGGCCCTCTCCATCTTCCACACTCTCGGCTACGGCTCTCCTCGCT TGACACACAGAAAATGGAGCTCCTTACCTGCATGGCCTCATCTATTGCCTCCCTTCCCAC GCTCTGCCTTCATCAGATCCTCGACTTTTCACGTCTTCACAACATCATATGACCTCTCAA GTACCCTCCCTTCCTCTTAAGTTCTTACTTCTCTTCTCTCAGGTCTTTAATTCTCTTTCC AGGAAACTCGGTTCTTCTATACACGGTACACATTCTGGGCTTGGTGTGCGCGGCTGTTGG GGAGGAAGAAGAGCGTTTATGATGCACAGGTCAGCCCGTCTCACAAGACTGAGGACTACA AAACACGGAAGCGAAGTTTCAGGCAAGCCAGTAATGGTGCACAGATGTCAGGGCGAGTAC TTTAGACAGCTTCTCAAACCTATTACGTAGATTTGTCTGGGGGCTTTGATACGGTCCTCA GCTGGTTACTACTACCTCAAATC
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK957107\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0027_H24, 5' (623 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done *** No hits found ****
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	B3H738
Definition	tr\|B3H738\|B3H738_ARATH Uncharacterized protein At5g50011.1 OS=Arabidopsis thaliana
Align length	51
Score (bit)	42.0
E-value	0.03
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK957107\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0027_H24, 5' (623 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|B3H738\|B3H738_ARATH Uncharacterized protein At5g50011.1 OS=Ar... 42 0.030 tr\|B3H582\|B3H582_ARATH Uncharacterized protein At5g09461.1 OS=Ar... 36 2.1 >tr\|B3H738\|B3H738_ARATH Uncharacterized protein At5g50011.1 OS=Arabidopsis thaliana GN=At5g50011 PE=4 SV=1 Length = 51 Score = 42.0 bits (97), Expect = 0.030 Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 8/51 (15%) Frame = +1 Query: 439 MMHRSARLTRLRTTKHGSEVSGKPVM--------VHRCQGEYFRQLLKPIT 567 M+ +SA TR RT KH ++G V+ + CQ EYFRQLLKP+T Sbjct: 1 MVCQSAGQTRFRTLKHEHGITGNIVVRVIACFQPLQDCQAEYFRQLLKPVT 51 >tr\|B3H582\|B3H582_ARATH Uncharacterized protein At5g09461.1 OS=Arabidopsis thaliana GN=At5g09461 PE=4 SV=1 Length = 54 Score = 35.8 bits (81), Expect = 2.1 Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 11/54 (20%) Frame = +1 Query: 439 MMHRSARLTRLRTTKHGSEV-SGKPVMVHR----------CQGEYFRQLLKPIT 567 M+ +SA TR RT K+ + S +P +V R CQ EYFR +LKP+T Sbjct: 1 MVSQSAGQTRFRTFKYENNGDSSRPTIVVRVIACFQPMDNCQAEYFRHILKPVT 54