Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957117|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0027_I10, 5' (395 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chl... 152 7e-37 sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chlorop... 135 5e-32 sp|Q07473|CB4A_ARATH Chlorophyll a-b binding protein CP29.1, chl... 80 4e-15 sp|Q9XF88|CB4B_ARATH Chlorophyll a-b binding protein CP29.2, chl... 79 9e-15 sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chlor... 71 1e-12 sp|P10707|CB2D_SOLLC Chlorophyll a-b binding protein 1D (Fragmen... 66 6e-11 sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop... 66 6e-11 sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl... 66 6e-11 sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro... 66 6e-11 sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop... 66 6e-11 sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro... 65 1e-10 sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop... 65 1e-10 sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro... 65 1e-10 sp|P14275|CB2C_SOLLC Chlorophyll a-b binding protein 1C, chlorop... 65 1e-10 sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop... 65 1e-10 sp|P14274|CB2A_SOLLC Chlorophyll a-b binding protein 1A, chlorop... 65 1e-10 sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop... 65 1e-10 sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloropl... 65 1e-10 sp|P92919|CB23_APIGR Chlorophyll a-b binding protein, chloroplas... 65 1e-10 sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop... 65 1e-10 sp|Q9S7W1|CB4C_ARATH Chlorophyll a-b binding protein CP29.3, chl... 64 2e-10 sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1, chloropl... 64 2e-10 sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop... 64 2e-10 sp|P14277|CB2F_SOLLC Chlorophyll a-b binding protein 3B, chlorop... 64 2e-10 sp|P14276|CB2E_SOLLC Chlorophyll a-b binding protein 3A, chlorop... 64 2e-10 sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb... 64 2e-10 sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas... 64 2e-10 sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop... 64 2e-10 sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplas... 64 2e-10 sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop... 64 2e-10
>sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1 Length = 245
Score = 152 bits (383), Expect = 7e-37 Identities = 72/115 (62%), Positives = 79/115 (68%) Frame = +1
Query: 1 YLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKYPGGPFDPLGFSKNPXXXXXX 180 YLGNPVPWGNLP QR EKDPEK+KYPGG FDPLGFSK+P Sbjct: 128 YLGNPVPWGNLPTILAIEFLAIAFAEQQRTMEKDPEKKKYPGGAFDPLGFSKDPAKFEEL 187
Query: 181 XXXXXXNGRLALLAFVGFSVQAAALPGTGPLENLFTHLADPWHKNIAEIVIPRSV 345 NGRLA+LAFVGF VQ +A PGTGPLENL THLADPWH NI +IVIPR++ Sbjct: 188 KLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIVIPRNI 242
>sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1 Length = 246
Score = 135 bits (341), Expect = 5e-32 Identities = 64/115 (55%), Positives = 74/115 (64%) Frame = +1
Query: 1 YLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKYPGGPFDPLGFSKNPXXXXXX 180 YLG PVPWG LP QR+ EKD EK+KYPGG FDPLG+SK+P Sbjct: 129 YLGQPVPWGTLPTILAIEFLAIAFVEHQRSMEKDSEKKKYPGGAFDPLGYSKDPAKFEEL 188
Query: 181 XXXXXXNGRLALLAFVGFSVQAAALPGTGPLENLFTHLADPWHKNIAEIVIPRSV 345 NGRLALLA VGF VQ +A GTGPLENL THLADPWH NI +++IP+ + Sbjct: 189 KVKEIKNGRLALLAIVGFCVQQSAYLGTGPLENLATHLADPWHNNIGDVIIPKGI 243
>sp|Q07473|CB4A_ARATH Chlorophyll a-b binding protein CP29.1, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.1 PE=2 SV=1 Length = 290
Score = 79.7 bits (195), Expect = 4e-15 Identities = 47/109 (43%), Positives = 60/109 (55%), Gaps = 1/109 (0%) Frame = +1
Query: 1 YLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKYPGGPF-DPLGFSKNPXXXXX 177 YLG P+P+ ++ QRN E D EKR YPGG F DPLG + +P Sbjct: 179 YLGQPLPF-SISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEKTAQ 237
Query: 178 XXXXXXXNGRLALLAFVGFSVQAAALPGTGPLENLFTHLADPWHKNIAE 324 + RLA++AF+GF+VQAAA G GPL N THL+DP H I + Sbjct: 238 LQLAEIKHARLAMVAFLGFAVQAAA-TGKGPLNNWATHLSDPLHTTIID 285
>sp|Q9XF88|CB4B_ARATH Chlorophyll a-b binding protein CP29.2, chloroplastic OS=Arabidopsis thaliana GN=LHCB4.2 PE=1 SV=1 Length = 287
Score = 78.6 bits (192), Expect = 9e-15 Identities = 46/109 (42%), Positives = 59/109 (54%), Gaps = 1/109 (0%) Frame = +1
Query: 1 YLGNPVPWGNLPXXXXXXXXXXXXXXXQRNYEKDPEKRKYPGGPF-DPLGFSKNPXXXXX 177 YLG P+P+ ++ QRN E D EKR YPGG F DPLG + +P Sbjct: 176 YLGQPLPF-SISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQ 234
Query: 178 XXXXXXXNGRLALLAFVGFSVQAAALPGTGPLENLFTHLADPWHKNIAE 324 + RLA++ F+GF+VQAAA G GPL N THL+DP H I + Sbjct: 235 LQLAEIKHARLAMVGFLGFAVQAAA-TGKGPLNNWATHLSDPLHTTIID 282
>sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1 Length = 280
Score = 71.2 bits (173), Expect = 1e-12 Identities = 34/77 (44%), Positives = 48/77 (62%) Frame = +1
Query: 100 DPEKRKYPGGPFDPLGFSKNPXXXXXXXXXXXXNGRLALLAFVGFSVQAAALPGTGPLEN 279 D E + +PGGPFDPLG +K+P NGRLA+ A +GF +Q A + G GP+EN Sbjct: 195 DFEDKLHPGGPFDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGFFIQ-AYVTGEGPVEN 253
Query: 280 LFTHLADPWHKNIAEIV 330 L HL+DP+ N+ ++ Sbjct: 254 LAKHLSDPFGNNLLTVI 270
>sp|P10707|CB2D_SOLLC Chlorophyll a-b binding protein 1D (Fragment) OS=Solanum lycopersicum GN=CAB1D PE=3 SV=1 Length = 116
Score = 65.9 bits (159), Expect = 6e-11 Identities = 38/91 (41%), Positives = 45/91 (49%) Frame = +1
Query: 118 YPGGPFDPLGFSKNPXXXXXXXXXXXXNGRLALLAFVGFSVQAAALPGTGPLENLFTHLA 297 YPGG FDPLG +++P NGRLA+ + GF VQ A + G GPLENL HLA Sbjct: 40 YPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQ-AIVTGKGPLENLADHLA 98
Query: 298 DPWHKNIAEIVIPRSVL*TV*RCLWSYETKF 390 DP + N WSY T F Sbjct: 99 DPVNNN-----------------AWSYATNF 112
>sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1 Length = 267
Score = 65.9 bits (159), Expect = 6e-11 Identities = 38/91 (41%), Positives = 45/91 (49%) Frame = +1
Query: 118 YPGGPFDPLGFSKNPXXXXXXXXXXXXNGRLALLAFVGFSVQAAALPGTGPLENLFTHLA 297 YPGG FDPLG +++P NGRLA+ + GF VQ A + G GPLENL HLA Sbjct: 191 YPGGSFDPLGLAEDPEAFAELKVKHIKNGRLAMFSMFGFFVQ-AIVTGKGPLENLADHLA 249
Query: 298 DPWHKNIAEIVIPRSVL*TV*RCLWSYETKF 390 DP + N WSY T F Sbjct: 250 DPVNNN-----------------AWSYATNF 263
>sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1 Length = 266
Score = 65.9 bits (159), Expect = 6e-11 Identities = 38/91 (41%), Positives = 45/91 (49%) Frame = +1
Query: 118 YPGGPFDPLGFSKNPXXXXXXXXXXXXNGRLALLAFVGFSVQAAALPGTGPLENLFTHLA 297 YPGG FDPLG +++P NGRLA+ + GF VQ A + G GPLENL HLA Sbjct: 190 YPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQ-ALVTGKGPLENLADHLA 248
Query: 298 DPWHKNIAEIVIPRSVL*TV*RCLWSYETKF 390 DP + N WSY T F Sbjct: 249 DPVNNN-----------------AWSYATNF 262
>sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1 Length = 267
Score = 65.9 bits (159), Expect = 6e-11 Identities = 38/91 (41%), Positives = 45/91 (49%) Frame = +1
Query: 118 YPGGPFDPLGFSKNPXXXXXXXXXXXXNGRLALLAFVGFSVQAAALPGTGPLENLFTHLA 297 YPGG FDPLG +++P NGRLA+ + GF VQ A + G GPLENL HLA Sbjct: 191 YPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQ-AIVTGKGPLENLADHLA 249
Query: 298 DPWHKNIAEIVIPRSVL*TV*RCLWSYETKF 390 DP + N WSY T F Sbjct: 250 DPVNNN-----------------AWSYATNF 263
>sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1 Length = 266
Score = 65.9 bits (159), Expect = 6e-11 Identities = 38/91 (41%), Positives = 45/91 (49%) Frame = +1
Query: 118 YPGGPFDPLGFSKNPXXXXXXXXXXXXNGRLALLAFVGFSVQAAALPGTGPLENLFTHLA 297 YPGG FDPLG +++P NGRLA+ + GF VQ A + G GPLENL HLA Sbjct: 190 YPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFGFFVQ-AIVTGKGPLENLADHLA 248
Query: 298 DPWHKNIAEIVIPRSVL*TV*RCLWSYETKF 390 DP + N WSY T F Sbjct: 249 DPVNNN-----------------AWSYATNF 262
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