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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK957141
Clone id TST39A01NGRL0027_J10
Library
Length 558
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0027_J10. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
ATCTGATCGAGGGAGGGAGGGAGGGAGGGAGGCTACCTTCCTCTCAATCGGGCCATCGCT
GCTTGCCTCAGCTGGTACTTCTATTTTTCTCGGAATCCACGCTCAGAAGTCTAATTCACC
CATTTTTTCAAGAGTGAGATCCCTTTCTGATGGAAAGCTTTGCAACCCCCTATCCGCTGA
TCTTCTTTGACGGCGAGCAAGAGCAAGACAAAGGATTTGTGGGCATACATTCTGTGCTCA
CTTTCAAACGCTTTCAGTCTCTGCTTAGTCAGAAGACAGGAATCTCTCCTAATCAACTCT
CGACAGTGTTCGTGTGTCGGAAAACTCTGAAAGGTTCAGAAAAGAAGCAAAGGCTTCCCA
TCAATGGGAACACAAACTTCAACATTCTTTTGAATCAGCACAATCCCACTAAGGAGAGAG
ATTGTTACTTTCTGGTATCTGTGAAGAGGTCGAAGAAGGAGCGGAAAGGATCGAGAAAGA
GAGGTGCAGAGTCGGAGATGCCCGAGGACTGGGACATTAACAATTACATCGCTGCTGTGG
AAGGTAATGGCCATTTCA
■■Homology search results ■■ -
sp_hit_id Q6S000
Definition sp|Q6S000|KIF12_DICDI Kinesin-related protein 12 OS=Dictyostelium discoideum
Align length 50
Score (bit) 30.0
E-value 8.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK957141|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0027_J10, 5'
         (558 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6S000|KIF12_DICDI Kinesin-related protein 12 OS=Dictyosteliu...    30   8.0  

>sp|Q6S000|KIF12_DICDI Kinesin-related protein 12 OS=Dictyostelium
           discoideum GN=kif12 PE=3 SV=1
          Length = 1499

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +3

Query: 228 HSVLTFKRFQSLLS-QKTGISPNQLSTVFVCRKTLKGSEKKQRLPINGNT 374
           H+VLT K F S     K+ I P+Q+    +C   L GSE+  R    G T
Sbjct: 423 HAVLTIKLFTSPRHIPKSDIHPSQIRCSKLCIIDLAGSERASRTETTGET 472
tr_hit_id A9S9N0
Definition tr|A9S9N0|A9S9N0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 125
Score (bit) 167.0
E-value 3.0e-40
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK957141|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0027_J10, 5'
         (558 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9S9N0|A9S9N0_PHYPA Predicted protein OS=Physcomitrella paten...   167   3e-40
tr|Q259M7|Q259M7_ORYSA H0723C07.4 protein OS=Oryza sativa GN=H07...    37   0.55 
tr|Q0J8V2|Q0J8V2_ORYSJ Os04g0685700 protein OS=Oryza sativa subs...    37   0.55 
tr|Q7RDQ0|Q7RDQ0_PLAYO Putative uncharacterized protein PY05371 ...    36   1.6  
tr|B3L483|B3L483_PLAKH Protein kinase, putative OS=Plasmodium kn...    35   2.1  
tr|Q229C4|Q229C4_TETTH Putative uncharacterized protein OS=Tetra...    34   4.6  
tr|Q6NM41|Q6NM41_ARATH At5g38180 OS=Arabidopsis thaliana GN=At5g...    33   7.9  

>tr|A9S9N0|A9S9N0_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_163644 PE=4 SV=1
          Length = 472

 Score =  167 bits (424), Expect = 3e-40
 Identities = 78/125 (62%), Positives = 99/125 (79%)
 Frame = +3

Query: 150 MESFATPYPLIFFDGEQEQDKGFVGIHSVLTFKRFQSLLSQKTGISPNQLSTVFVCRKTL 329
           MESFATPYP++F DG+QE DKG VG+HSVL+FKRFQ+L+SQKTGI  NQLS VFVCR+TL
Sbjct: 1   MESFATPYPVVFCDGDQEHDKGVVGVHSVLSFKRFQALMSQKTGIPANQLSAVFVCRRTL 60

Query: 330 KGSEKKQRLPINGNTNFNILLNQHNPTKERDCYFLVSVXXXXXXXXXXXXXXAESEMPED 509
           K ++K+Q+LPIN NTNFNI+LNQHNP++E+DC+FLVS+              AE+E  +D
Sbjct: 61  KDTDKRQKLPINENTNFNIILNQHNPSREKDCHFLVSIKKSKKERKGTRKRNAEAENADD 120

Query: 510 WDINN 524
            D N+
Sbjct: 121 EDSNS 125


>tr|Q259M7|Q259M7_ORYSA H0723C07.4 protein OS=Oryza sativa
           GN=H0723C07.4 PE=4 SV=1
          Length = 281

 Score = 37.4 bits (85), Expect = 0.55
 Identities = 18/72 (25%), Positives = 38/72 (52%)
 Frame = +3

Query: 162 ATPYPLIFFDGEQEQDKGFVGIHSVLTFKRFQSLLSQKTGISPNQLSTVFVCRKTLKGSE 341
           A   P++F DG+Q  D G V +   L  ++ Q++++ + G++P Q+        +L    
Sbjct: 11  AAVLPVVFVDGDQTVDLGTVTVQPSLGVRKLQAVVADRVGLAPQQILA------SLARPR 64

Query: 342 KKQRLPINGNTN 377
           + +R+P+   T+
Sbjct: 65  RARRVPLEEGTD 76


>tr|Q0J8V2|Q0J8V2_ORYSJ Os04g0685700 protein OS=Oryza sativa subsp.
           japonica GN=Os04g0685700 PE=4 SV=1
          Length = 281

 Score = 37.4 bits (85), Expect = 0.55
 Identities = 18/72 (25%), Positives = 38/72 (52%)
 Frame = +3

Query: 162 ATPYPLIFFDGEQEQDKGFVGIHSVLTFKRFQSLLSQKTGISPNQLSTVFVCRKTLKGSE 341
           A   P++F DG+Q  D G V +   L  ++ Q++++ + G++P Q+        +L    
Sbjct: 11  AAVLPVVFVDGDQTVDLGTVTVQPSLGVRKLQAVVADRVGLAPQQILA------SLARPR 64

Query: 342 KKQRLPINGNTN 377
           + +R+P+   T+
Sbjct: 65  RARRVPLEEGTD 76


>tr|Q7RDQ0|Q7RDQ0_PLAYO Putative uncharacterized protein PY05371
           OS=Plasmodium yoelii yoelii GN=PY05371 PE=4 SV=1
          Length = 1730

 Score = 35.8 bits (81), Expect = 1.6
 Identities = 16/46 (34%), Positives = 26/46 (56%)
 Frame = +3

Query: 285 SPNQLSTVFVCRKTLKGSEKKQRLPINGNTNFNILLNQHNPTKERD 422
           S N + + ++C K+ +G  K  +L  N N N +IL +   PT E+D
Sbjct: 308 SENNIKSKYICEKSDEGINKSLKLNYNKNCNHSILSHDSVPTNEKD 353


>tr|B3L483|B3L483_PLAKH Protein kinase, putative OS=Plasmodium
            knowlesi (strain H) GN=PKH_082860 PE=4 SV=1
          Length = 2827

 Score = 35.4 bits (80), Expect = 2.1
 Identities = 22/89 (24%), Positives = 40/89 (44%)
 Frame = +2

Query: 215  ICGHTFCAHFQTLSVSA*SEDRNLS*STLDSVRVSENSERFRKEAKASHQWEHKLQHSFE 394
            +CG   C+    +  S   +   LS  + D     +++  +  E +  H+ EHKL+H  E
Sbjct: 1270 MCGRMMCSQ---VMCSEKMDHELLSGESHDEEEDFKDALEYELERELEHELEHKLEHELE 1326

Query: 395  SAQSH*GERLLLSGICEEVEEGAERIEKE 481
                H  ER L   +  E+ E   ++++E
Sbjct: 1327 RELEHELERELEHELQREIREEERKLDRE 1355


>tr|Q229C4|Q229C4_TETTH Putative uncharacterized protein
            OS=Tetrahymena thermophila SB210 GN=TTHERM_01436760 PE=4
            SV=1
          Length = 1415

 Score = 34.3 bits (77), Expect = 4.6
 Identities = 12/45 (26%), Positives = 25/45 (55%)
 Frame = +3

Query: 282  ISPNQLSTVFVCRKTLKGSEKKQRLPINGNTNFNILLNQHNPTKE 416
            I  ++L  +F+C+  +  ++K Q+  +  N N N +   HNP ++
Sbjct: 1254 IEQDKLKDIFICQSPVSSNKKSQQQKVASNINQNYVTKSHNPQQQ 1298


>tr|Q6NM41|Q6NM41_ARATH At5g38180 OS=Arabidopsis thaliana
           GN=At5g38180 PE=4 SV=1
          Length = 95

 Score = 33.5 bits (75), Expect = 7.9
 Identities = 18/52 (34%), Positives = 29/52 (55%)
 Frame = -2

Query: 428 VTISLLSGIVLIQKNVEVCVPIDGKPLLLF*TFQSFPTHEHCRELIRRDSCL 273
           V I L S I++  +  + CVP++  P L   T +  PT + C  LI++ +CL
Sbjct: 12  VIIVLSSPILMKAEETQSCVPMELMPCLPAMTKREQPTKDCCENLIKQKTCL 63