DK957164 |
Clone id |
TST39A01NGRL0027_K09 |
Library |
TST39 |
Length |
598 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0027_K09. 5' end sequence. |
Accession |
DK957164 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1617Contig1 |
Sequence |
GTTTGTCTGTTGTAGCGATATCACGACGATGGTGAAGAAGAGCAAAAAGAGCAAGAGCAA GCGAGTGCCTTTGCGCAAGAAGTACAAGATTCTGAAGAAAGTGAAGGAGCACCACAAAAA GAAAGCCAAAGAGGCTAAAAAACTCGGCAAACGCAAGCAGCCAGTGACGAAGGATCCTGG CATTCCCAATGCATGGCCCTTTAAAGAGCAGGAGCTGCAAGCTCTTGAAGCGCGGCGCGC TCGAGCTCTTGAGGAGATGGAGCTGAAAAAGCAGGCAAAGAAAGAAAGGGCTGAGAAACG AAAGCTCGGGTTGATCAGTGAAGGAGAACCAGGCCTTACTGATCTGGCTCAAACGGCAGC TAGTCAAAGCTTAGAGTTTGATAAAAAGAGCAAGCCCAACAAGGATGGCACGATCACTCA TGATGGTTCTCAACGGTCCTTTTATAGAGAGCTGGTCAAGGTGATCGAAGCATCAGATGT CATAATTGAAGTTCTGGACGCCAGAGATCCTCTGGGAAGCAGATGTAAAGATATTGAAAG GCTTGTAGTGACGGCTGTTCCAACAAAGCATTTGATTCTGTTGCTAAATAAGATTGAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q54KS4 |
Definition |
sp|Q54KS4|GNL3_DICDI Guanine nucleotide-binding protein-like 3 homolog OS=Dictyostelium discoideum |
Align length |
150 |
Score (bit) |
85.1 |
E-value |
2.0e-16 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LNF4 |
Definition |
tr|B8LNF4|B8LNF4_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
149 |
Score (bit) |
117.0 |
E-value |
5.0e-25 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957164|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0027_K09, 5' (598 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LNF4|B8LNF4_PICSI Putative uncharacterized protein OS=Picea... 117 5e-25 tr|B6UF30|B6UF30_MAIZE Guanine nucleotide-binding protein-like 3... 113 7e-24 tr|Q5ZCV4|Q5ZCV4_ORYSJ Putative nucleostemin (Os01g0375000 prote... 112 2e-23 tr|A2ZTB0|A2ZTB0_ORYSJ Putative uncharacterized protein OS=Oryza... 112 2e-23 tr|A2WQ59|A2WQ59_ORYSI Putative uncharacterized protein OS=Oryza... 112 2e-23 tr|A7QKU4|A7QKU4_VITVI Chromosome undetermined scaffold_114, who... 110 5e-23 tr|B6SHF2|B6SHF2_MAIZE Putative uncharacterized protein OS=Zea m... 110 6e-23 tr|A1X875|A1X875_SOLLC Putative nuclear GTPase OS=Solanum lycope... 104 4e-21 tr|Q9M8Z5|Q9M8Z5_ARATH Putative GTPase OS=Arabidopsis thaliana G... 100 5e-20 tr|Q93Y17|Q93Y17_ARATH Putative GTPase (Fragment) OS=Arabidopsis... 100 5e-20 tr|A9SLN4|A9SLN4_PHYPA Predicted protein (Fragment) OS=Physcomit... 97 5e-19 tr|A7SZ44|A7SZ44_NEMVE Predicted protein (Fragment) OS=Nematoste... 88 3e-16 tr|A9T030|A9T030_PHYPA Predicted protein (Fragment) OS=Physcomit... 87 7e-16 tr|A5AJL5|A5AJL5_VITVI Putative uncharacterized protein OS=Vitis... 86 2e-15 tr|Q94703|Q94703_PHYPO Myosin-related protein (Fragment) OS=Phys... 85 4e-15 tr|A7RNM6|A7RNM6_NEMVE Predicted protein (Fragment) OS=Nematoste... 82 2e-14 tr|A4RTU2|A4RTU2_OSTLU Predicted protein OS=Ostreococcus lucimar... 81 4e-14 tr|A8IVS6|A8IVS6_CHLRE Predicted protein (Fragment) OS=Chlamydom... 78 4e-13 tr|A3LRJ9|A3LRJ9_PICST Nuclear/nucleolar GTP-binding protein 2 O... 78 4e-13 tr|B6KXH7|B6KXH7_BRAFL Putative uncharacterized protein OS=Branc... 77 8e-13 tr|Q5PPS6|Q5PPS6_XENLA LOC496093 protein (Fragment) OS=Xenopus l... 76 1e-12 tr|A0JMT3|A0JMT3_XENLA LOC496093 protein OS=Xenopus laevis GN=gn... 76 1e-12 tr|B3RUV1|B3RUV1_TRIAD Putative uncharacterized protein (Fragmen... 76 2e-12 tr|Q4SR54|Q4SR54_TETNG Chromosome 11 SCAF14528, whole genome sho... 75 2e-12 tr|Q017F2|Q017F2_OSTTA Putative nucleostemin (ISS) OS=Ostreococc... 74 5e-12 tr|Q5A8L7|Q5A8L7_CANAL Putative uncharacterized protein OS=Candi... 73 1e-11 tr|Q4PFZ9|Q4PFZ9_USTMA Putative uncharacterized protein OS=Ustil... 72 2e-11 tr|B6JXT0|B6JXT0_SCHJP Nucleolar GTP-binding protein OS=Schizosa... 72 2e-11 tr|B2WB59|B2WB59_PYRTR Nucleolar GTP-binding protein 2 OS=Pyreno... 72 2e-11 tr|B2AB86|B2AB86_PODAN Predicted CDS Pa_1_6480 OS=Podospora anse... 72 2e-11
>tr|B8LNF4|B8LNF4_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 606
Score = 117 bits (293), Expect = 5e-25 Identities = 69/149 (46%), Positives = 87/149 (58%), Gaps = 4/149 (2%) Frame = +2
Query: 164 VTKDPGIPNAWPFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISEGEPGLTD 343 V KDPGIPN WPFK GL+ E + L Sbjct: 47 VEKDPGIPNDWPFKEQELQALEARRARALEEMEQKKELRKERAQKRKLGLLEE-DADLKQ 105
Query: 344 LAQTAASQSLEFDKKS----KPNKDGTITHDGSQRSFYRELVKVIEASDVIIEVLDARDP 511 LA + +++ +F KKS ++DGTI HD S R+FY+ELVKVIE SDVI+EVLDARDP Sbjct: 106 LANSISNRQDDFAKKSLSSRDASRDGTI-HDRSDRAFYKELVKVIETSDVILEVLDARDP 164
Query: 512 LGSRCKDIERLVVTAVPTKHLILLLNKID 598 LG+RC D+ER+V+ A P K L+LL+NKID Sbjct: 165 LGTRCTDMERMVLRAGPEKRLVLLINKID 193
>tr|B6UF30|B6UF30_MAIZE Guanine nucleotide-binding protein-like 3 OS=Zea mays PE=2 SV=1 Length = 592
Score = 113 bits (283), Expect = 7e-24 Identities = 66/149 (44%), Positives = 84/149 (56%), Gaps = 4/149 (2%) Frame = +2
Query: 164 VTKDPGIPNAWPFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISEGEPGLTD 343 V KDPGIPN WPFK GL+ + E + + Sbjct: 48 VEKDPGIPNEWPFKEQELKALEARRAQALQELELKKEARKERARKRKLGLLEDEE--IAN 105
Query: 344 LAQTAASQSLEFDKKSKPNKDGTIT----HDGSQRSFYRELVKVIEASDVIIEVLDARDP 511 LA A++Q EF K +T +D S+RSFY+ELVKVIEASDVI+EVLDARDP Sbjct: 106 LASAASAQGSEFAAKDAAKDKAPLTVAKSNDHSERSFYKELVKVIEASDVILEVLDARDP 165
Query: 512 LGSRCKDIERLVVTAVPTKHLILLLNKID 598 LG+RC D+E++V A P+K ++LLLNKID Sbjct: 166 LGTRCIDMEKMVRKADPSKRIVLLLNKID 194
>tr|Q5ZCV4|Q5ZCV4_ORYSJ Putative nucleostemin (Os01g0375000 protein) OS=Oryza sativa subsp. japonica GN=B1111C09.2 PE=4 SV=1 Length = 591
Score = 112 bits (280), Expect = 2e-23 Identities = 63/149 (42%), Positives = 87/149 (58%), Gaps = 4/149 (2%) Frame = +2
Query: 164 VTKDPGIPNAWPFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISEGEPGLTD 343 V KDPGIPN WPFK GL+ + + + + Sbjct: 47 VEKDPGIPNEWPFKEQELKALEARRAQALQELELKKEARKERARKRKLGLLEDED--IAN 104
Query: 344 LAQTAASQSLEFDKKSKPNKDGTI----THDGSQRSFYRELVKVIEASDVIIEVLDARDP 511 LA A++Q EF +K ++ ++ + D S+R+FY+ELVKVIEASDVI+EVLDARDP Sbjct: 105 LASAASAQGSEFAEKDAAKENASLDVVKSQDHSERAFYKELVKVIEASDVILEVLDARDP 164
Query: 512 LGSRCKDIERLVVTAVPTKHLILLLNKID 598 LG+RC D+E++V A P+K ++LLLNKID Sbjct: 165 LGTRCIDMEKMVRKADPSKRIVLLLNKID 193
>tr|A2ZTB0|A2ZTB0_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_001782 PE=4 SV=1 Length = 740
Score = 112 bits (280), Expect = 2e-23 Identities = 63/149 (42%), Positives = 87/149 (58%), Gaps = 4/149 (2%) Frame = +2
Query: 164 VTKDPGIPNAWPFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISEGEPGLTD 343 V KDPGIPN WPFK GL+ + + + + Sbjct: 196 VEKDPGIPNEWPFKEQELKALEARRAQALQELELKKEARKERARKRKLGLLEDED--IAN 253
Query: 344 LAQTAASQSLEFDKKSKPNKDGTI----THDGSQRSFYRELVKVIEASDVIIEVLDARDP 511 LA A++Q EF +K ++ ++ + D S+R+FY+ELVKVIEASDVI+EVLDARDP Sbjct: 254 LASAASAQGSEFAEKDAAKENASLDVVKSQDHSERAFYKELVKVIEASDVILEVLDARDP 313
Query: 512 LGSRCKDIERLVVTAVPTKHLILLLNKID 598 LG+RC D+E++V A P+K ++LLLNKID Sbjct: 314 LGTRCIDMEKMVRKADPSKRIVLLLNKID 342
>tr|A2WQ59|A2WQ59_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_01991 PE=4 SV=1 Length = 591
Score = 112 bits (280), Expect = 2e-23 Identities = 63/149 (42%), Positives = 87/149 (58%), Gaps = 4/149 (2%) Frame = +2
Query: 164 VTKDPGIPNAWPFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISEGEPGLTD 343 V KDPGIPN WPFK GL+ + + + + Sbjct: 47 VEKDPGIPNEWPFKEQELKALEARRAQALQELELKKEARKERARKRKLGLLEDED--IAN 104
Query: 344 LAQTAASQSLEFDKKSKPNKDGTI----THDGSQRSFYRELVKVIEASDVIIEVLDARDP 511 LA A++Q EF +K ++ ++ + D S+R+FY+ELVKVIEASDVI+EVLDARDP Sbjct: 105 LASAASAQGSEFAEKDAAKENASLDVVKSQDHSERAFYKELVKVIEASDVILEVLDARDP 164
Query: 512 LGSRCKDIERLVVTAVPTKHLILLLNKID 598 LG+RC D+E++V A P+K ++LLLNKID Sbjct: 165 LGTRCIDMEKMVRKADPSKRIVLLLNKID 193
>tr|A7QKU4|A7QKU4_VITVI Chromosome undetermined scaffold_114, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00001280001 PE=3 SV=1 Length = 587
Score = 110 bits (276), Expect = 5e-23 Identities = 61/145 (42%), Positives = 85/145 (58%) Frame = +2
Query: 164 VTKDPGIPNAWPFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISEGEPGLTD 343 V KDPGIPN WPFK GL+ + + ++ Sbjct: 47 VEKDPGIPNDWPFKEQELKALEARRARALEELEQKKAARKERAQKRKLGLLKDDD--MSK 104
Query: 344 LAQTAASQSLEFDKKSKPNKDGTITHDGSQRSFYRELVKVIEASDVIIEVLDARDPLGSR 523 LA A+++ +F+ +G +T + S R+FY+ELV+VIEASDVI+EVLDARDPLG+R Sbjct: 105 LADMASAKEQDFE-------EGKVTLNNSDRAFYKELVEVIEASDVILEVLDARDPLGTR 157
Query: 524 CKDIERLVVTAVPTKHLILLLNKID 598 C D+E++V+ + P KHL+LLLNKID Sbjct: 158 CVDMEKMVMRSGPNKHLVLLLNKID 182
>tr|B6SHF2|B6SHF2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 594
Score = 110 bits (275), Expect = 6e-23 Identities = 64/145 (44%), Positives = 81/145 (55%) Frame = +2
Query: 164 VTKDPGIPNAWPFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISEGEPGLTD 343 V KDPGIPN WPFK GL+ + + + Sbjct: 48 VEKDPGIPNEWPFKEQELKALEARRAQALQELELKKQARKERAQKRKAGLLEDED--IAS 105
Query: 344 LAQTAASQSLEFDKKSKPNKDGTITHDGSQRSFYRELVKVIEASDVIIEVLDARDPLGSR 523 LA A++Q EF K +D S+RSFY+ELVKVIEASDVI+EVLDARDPLG+R Sbjct: 106 LASAASAQGSEFAAKENAPLLVAKINDHSERSFYKELVKVIEASDVIMEVLDARDPLGTR 165
Query: 524 CKDIERLVVTAVPTKHLILLLNKID 598 C D+E++V A P+K ++LLLNKID Sbjct: 166 CIDMEKMVRKADPSKRIVLLLNKID 190
>tr|A1X875|A1X875_SOLLC Putative nuclear GTPase OS=Solanum lycopersicum PE=2 SV=1 Length = 609
Score = 104 bits (259), Expect = 4e-21 Identities = 57/145 (39%), Positives = 78/145 (53%) Frame = +2
Query: 164 VTKDPGIPNAWPFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISEGEPGLTD 343 V KDPGIPN WPFK GL+ + + + Sbjct: 47 VEKDPGIPNDWPFKEQELKALEARRARALDELEQKKVARKERAKKRKLGLLEDDDVSKLE 106
Query: 344 LAQTAASQSLEFDKKSKPNKDGTITHDGSQRSFYRELVKVIEASDVIIEVLDARDPLGSR 523 + + + + + + D S+R+FY+ELVKVI+ASDVI+EVLDARDPLG+R Sbjct: 107 GLTSTKEKEVGGGRVNDGSASFVKQRDNSERAFYKELVKVIDASDVILEVLDARDPLGTR 166
Query: 524 CKDIERLVVTAVPTKHLILLLNKID 598 C D+E++V+ A P KHL+LLLNKID Sbjct: 167 CLDMEKMVMRAGPEKHLVLLLNKID 191
>tr|Q9M8Z5|Q9M8Z5_ARATH Putative GTPase OS=Arabidopsis thaliana GN=At3g07050 PE=3 SV=1 Length = 582
Score = 100 bits (250), Expect = 5e-20 Identities = 61/145 (42%), Positives = 76/145 (52%) Frame = +2
Query: 164 VTKDPGIPNAWPFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISEGEPGLTD 343 V KDPGIPN WPFK GL+ + + Sbjct: 47 VEKDPGIPNDWPFKEQELKALEVRRARALEEIEQKKEARKERAKKRKLGLVDDEDT---- 102
Query: 344 LAQTAASQSLEFDKKSKPNKDGTITHDGSQRSFYRELVKVIEASDVIIEVLDARDPLGSR 523 +++E D N D S+R+FY+ELVKVIE SDVI+EVLDARDPLG+R Sbjct: 103 ---KTEGETIE-DLPKVVN-----VRDNSERAFYKELVKVIELSDVILEVLDARDPLGTR 153
Query: 524 CKDIERLVVTAVPTKHLILLLNKID 598 C D+ER+V+ A P KHL+LLLNKID Sbjct: 154 CTDMERMVMQAGPNKHLVLLLNKID 178
>tr|Q93Y17|Q93Y17_ARATH Putative GTPase (Fragment) OS=Arabidopsis thaliana GN=At3g07050/F17A9.21 PE=2 SV=1 Length = 497
Score = 100 bits (250), Expect = 5e-20 Identities = 61/145 (42%), Positives = 76/145 (52%) Frame = +2
Query: 164 VTKDPGIPNAWPFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLISEGEPGLTD 343 V KDPGIPN WPFK GL+ + + Sbjct: 13 VEKDPGIPNDWPFKEQELKALEVRRARALEEIEQKKEARKERAKKRKLGLVDDEDT---- 68
Query: 344 LAQTAASQSLEFDKKSKPNKDGTITHDGSQRSFYRELVKVIEASDVIIEVLDARDPLGSR 523 +++E D N D S+R+FY+ELVKVIE SDVI+EVLDARDPLG+R Sbjct: 69 ---KTEGETIE-DLPKVVN-----VRDNSERAFYKELVKVIELSDVILEVLDARDPLGTR 119
Query: 524 CKDIERLVVTAVPTKHLILLLNKID 598 C D+ER+V+ A P KHL+LLLNKID Sbjct: 120 CTDMERMVMQAGPNKHLVLLLNKID 144
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