DK957175
Clone id TST39A01NGRL0027_K20
Library
Length 512
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0027_K20. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CGGGCTTGCGAGCTATTGTGTAGGCGCAGCTGGTTGGGGAACGATAATATGTTGGTGTGT
ATGTGATCTGTATAGAGGTACTGCAATATTTTCATCACCTTGTGCATTAGCTTCAGTACC
AGCGATGCATTAATTGCTGCGTATAGGCGCAGCTGGTTGGGGAACGATAATATGTTGGTG
TGTATGTGATCTGTATAGAGAGAAATTAAGAGGATAGAATATAATTGGTGCAGCTATGAA
AACGTCAGCGACTGCGTCGACGAGCAGCAACATGATGAGCAGTGAGAGGAGTAGCATGAG
TAGCTGTGGAAGGGGGCTGGGGCTGGCGAGGACGGCCAAGGCCGTAGCGGAGGCGGTGAT
CGTCGCGGCTTGCTTGATGTGGGTGCTCTACTGGTTCTTCAAGCCGGAGCCGCAGGCCGA
CGATACCCACCTCTCCAAGAACACCCGCTCTCGCTTCTTCCGCACTGATGGCCGGGAAGG
ATTTTCCCTTTATATACCAAACATTGCCTTTT
■■Homology search results ■■ -
sp_hit_id A4FBB2
Definition sp|A4FBB2|APT_SACEN Adenine phosphoribosyltransferase OS=Saccharopolyspora erythraea (strain NRRL 23338)
Align length 57
Score (bit) 32.7
E-value 1.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK957175|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0027_K20, 5'
(512 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A4FBB2|APT_SACEN Adenine phosphoribosyltransferase OS=Sacchar... 33 1.0
sp|Q9LJY7|C75AK_ARATH Cytochrome P450 705A20 OS=Arabidopsis thal... 32 2.2

>sp|A4FBB2|APT_SACEN Adenine phosphoribosyltransferase
OS=Saccharopolyspora erythraea (strain NRRL 23338)
GN=apt PE=3 SV=1
Length = 182

Score = 32.7 bits (73), Expect = 1.0
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Frame = -2

Query: 490 KGKSFPAISAEEARAGVLGEV-------GIVGLRLRLEEPVEHPHQASRDDHRLRYG 341
+G F ++ EAR +LG G+VGLR +P + P A R D+RL YG
Sbjct: 57 RGHDFDVVAGVEARGFLLGAAVAQAHGTGVVGLR----KPGKLPEVAHRVDYRLEYG 109


>sp|Q9LJY7|C75AK_ARATH Cytochrome P450 705A20 OS=Arabidopsis
thaliana GN=CYP705A20 PE=1 SV=1
Length = 510

Score = 31.6 bits (70), Expect = 2.2
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = -1

Query: 221 YSILLISLYTDHIHTNILSFPNQLRLYAAINASLVLKLMHKVMKILQYLYTDHIHTNILS 42
YS+L L H+ ++L P L + ++ L+ L HK ++ L Y +H +I +
Sbjct: 23 YSLLFKKLKDSHVGRDLLQSPPSLPIIGHLH-HLLSSLAHKSLQQLSSKYGPLLHLSIFN 81

Query: 41 FP 36
FP
Sbjct: 82 FP 83


tr_hit_id Q120B3
Definition tr|Q120B3|Q120B3_POLSJ Carbamoyl-phosphate synthase L chain, ATP-binding OS=Polaromonas sp. (strain JS666 / ATCC BAA-500)
Align length 44
Score (bit) 34.7
E-value 2.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK957175|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0027_K20, 5'
(512 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q120B3|Q120B3_POLSJ Carbamoyl-phosphate synthase L chain, ATP... 35 2.8
tr|Q9E8Q8|Q9E8Q8_9POXV RI-1 protein (Rifampicin resistance prote... 33 6.2

>tr|Q120B3|Q120B3_POLSJ Carbamoyl-phosphate synthase L chain,
ATP-binding OS=Polaromonas sp. (strain JS666 / ATCC
BAA-500) GN=Bpro_5270 PE=4 SV=1
Length = 665

Score = 34.7 bits (78), Expect = 2.8
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +2

Query: 29 AGWGTIICWCVCDLYRGTAIFSSPCALASVPAMH*LLRIGAAGW 160
AGW + CW + D + G + S P A PA+ +L+ G A W
Sbjct: 472 AGWSALGCWTLWDGFTGWRLSSGPIQAAPQPAL--VLKAGVAEW 513


>tr|Q9E8Q8|Q9E8Q8_9POXV RI-1 protein (Rifampicin resistance protein)
OS=Diachasmimorpha longicaudata entomopoxvirus PE=4 SV=1
Length = 546

Score = 33.5 bits (75), Expect = 6.2
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 9/81 (11%)
Frame = -1

Query: 251 SLTFS*LHQLY-SILLISLYTDH---IHTNILSFPNQLRLYAAINASLVLKLMHKV---- 96
++TF+ L + + I + ++ DH HTNILSF + + A+N S + K + V
Sbjct: 313 TMTFNKLEKRFCKITIENIPEDHKLYYHTNILSFTRRFQHTKALNVSTLFKKITGVYLPN 372

Query: 95 MKILQYLYTDH-IHTNILSFP 36
K++ +L DH I I+S P
Sbjct: 373 QKVINFLDIDHSIDIKIVSLP 393