DK957181 |
Clone id |
TST39A01NGRL0027_L02 |
Library |
TST39 |
Length |
322 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0027_L02. 5' end sequence. |
Accession |
DK957181 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL2226Contig1 |
Sequence |
TGGAGAACTTCGTCCGGCAGGCTGACCTCCTCCGGCAACAGACACTCCAGGGTCCCAAGC TCATTCATACCACTCGCCATGCCGCAAGGGGCCTGCTTGCAATGGGCGATTACTTCTCAC GTCTCCGAGCGTTGAGCTCGCTCTGGGTAGCAAGGCCACAAGAATGAGAAATGTCAAATA GCCGTTCGCAAAATTTAGAACTATCTTTTACAGCAGAGAATGGGTTGCCTGCATAATATG GTAGGGCATATGATTATTGTAGCCAGATCACTTGATTTGGGAGAGGGCTTATCAAGTCAA TGCGAATATACATTGCCGACTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q39234 |
Definition |
sp|Q39234|TGA3_ARATH Transcription factor TGA3 OS=Arabidopsis thaliana |
Align length |
54 |
Score (bit) |
78.2 |
E-value |
1.0e-14 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RVA7 |
Definition |
tr|A9RVA7|A9RVA7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
54 |
Score (bit) |
79.0 |
E-value |
1.0e-13 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957181|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0027_L02, 5' (322 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RVA7|A9RVA7_PHYPA Predicted protein OS=Physcomitrella paten... 79 1e-13 tr|Q147Q9|Q147Q9_ARATH At1g22070 OS=Arabidopsis thaliana PE=2 SV=1 78 2e-13 tr|A9TLE8|A9TLE8_PHYPA Predicted protein (Fragment) OS=Physcomit... 78 3e-13 tr|Q5Z6N9|Q5Z6N9_ORYSJ Os06g0265400 protein OS=Oryza sativa subs... 77 3e-13 tr|A3BAH7|A3BAH7_ORYSJ Putative uncharacterized protein OS=Oryza... 77 3e-13 tr|A2YBH9|A2YBH9_ORYSI Putative uncharacterized protein OS=Oryza... 77 3e-13 tr|Q9SQK1|Q9SQK1_TOBAC BZIP transcription factor OS=Nicotiana ta... 77 6e-13 tr|Q8W5R7|Q8W5R7_ORYSA BZIP transcription factor OS=Oryza sativa... 76 7e-13 tr|Q6IVC2|Q6IVC2_ORYSJ BZIP transcription factor OS=Oryza sativa... 76 7e-13 tr|Q06979|Q06979_MAIZE Ocs-element binding factor 3.2 OS=Zea may... 76 7e-13 tr|Q06978|Q06978_MAIZE Ocs-element binding factor 3.1 OS=Zea may... 76 7e-13 tr|B8ABC1|B8ABC1_ORYSI Putative uncharacterized protein OS=Oryza... 76 7e-13 tr|B4FFB3|B4FFB3_MAIZE Putative uncharacterized protein OS=Zea m... 76 7e-13 tr|B4FBG8|B4FBG8_MAIZE Putative uncharacterized protein OS=Zea m... 76 7e-13 tr|A9SW24|A9SW24_PHYPA Predicted protein OS=Physcomitrella paten... 76 7e-13 tr|A2TEM4|A2TEM4_9ROSI TGA transcription factor 2 OS=Populus tre... 76 7e-13 tr|A7QJH9|A7QJH9_VITVI Chromosome chr8 scaffold_106, whole genom... 76 1e-12 tr|A7Q5D1|A7Q5D1_VITVI Chromosome undetermined scaffold_53, whol... 76 1e-12 tr|Q93XA0|Q93XA0_PHAVU TGA-type basic leucine zipper protein TGA... 75 1e-12 tr|Q8W5S0|Q8W5S0_ORYSA BZIP transcription factor OS=Oryza sativa... 75 1e-12 tr|Q0WQ44|Q0WQ44_ARATH BZip transcription factor AtbZip50 OS=Ara... 75 1e-12 tr|A7Y1S1|A7Y1S1_BRAJU BZIP transcription factor OS=Brassica jun... 75 1e-12 tr|A7NV45|A7NV45_VITVI Chromosome chr18 scaffold_1, whole genome... 75 1e-12 tr|Q6IVC3|Q6IVC3_ORYSJ Os03g0318600 protein OS=Oryza sativa subs... 75 2e-12 tr|B8AN01|B8AN01_ORYSI Putative uncharacterized protein OS=Oryza... 75 2e-12 tr|B8A1K4|B8A1K4_MAIZE Putative uncharacterized protein OS=Zea m... 75 2e-12 tr|B4FZ00|B4FZ00_MAIZE Putative uncharacterized protein OS=Zea m... 75 2e-12 tr|B4FMH2|B4FMH2_MAIZE Putative uncharacterized protein OS=Zea m... 75 2e-12 tr|A9TLE0|A9TLE0_PHYPA Predicted protein OS=Physcomitrella paten... 75 2e-12 tr|A7P354|A7P354_VITVI Chromosome chr1 scaffold_5, whole genome ... 75 2e-12
>tr|A9RVA7|A9RVA7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_71017 PE=3 SV=1 Length = 328
Score = 79.0 bits (193), Expect = 1e-13 Identities = 41/54 (75%), Positives = 45/54 (83%) Frame = +3
Query: 3 ENFVRQADLLRQQTLQGPKLIHTTRHAARGLLAMGDYFSRLRALSSLWVARPQE 164 E FV +AD LRQQTLQ I TTR AARGLLAMGDYF+RLRALSSLW+ARP+E Sbjct: 273 EAFVHRADNLRQQTLQQMHRILTTRQAARGLLAMGDYFARLRALSSLWLARPRE 326
>tr|Q147Q9|Q147Q9_ARATH At1g22070 OS=Arabidopsis thaliana PE=2 SV=1 Length = 384
Score = 78.2 bits (191), Expect = 2e-13 Identities = 40/54 (74%), Positives = 44/54 (81%) Frame = +3
Query: 3 ENFVRQADLLRQQTLQGPKLIHTTRHAARGLLAMGDYFSRLRALSSLWVARPQE 164 E+FV QAD LRQQTLQ I TTR AARGLLA+G+YF RLRALSSLW ARP+E Sbjct: 329 ESFVNQADHLRQQTLQQMSKILTTRQAARGLLALGEYFHRLRALSSLWAARPRE 382
>tr|A9TLE8|A9TLE8_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_147335 PE=3 SV=1 Length = 290
Score = 77.8 bits (190), Expect = 3e-13 Identities = 40/54 (74%), Positives = 43/54 (79%) Frame = +3
Query: 3 ENFVRQADLLRQQTLQGPKLIHTTRHAARGLLAMGDYFSRLRALSSLWVARPQE 164 E FVRQAD LRQQTLQ + T R ARGLLAMGDYF+RLRALSSLW ARP+E Sbjct: 237 EGFVRQADHLRQQTLQQMHRVLTIRQVARGLLAMGDYFARLRALSSLWSARPRE 290
>tr|Q5Z6N9|Q5Z6N9_ORYSJ Os06g0265400 protein OS=Oryza sativa subsp. japonica GN=OJ1001_B06.18 PE=2 SV=1 Length = 385
Score = 77.4 bits (189), Expect = 3e-13 Identities = 39/54 (72%), Positives = 44/54 (81%) Frame = +3
Query: 3 ENFVRQADLLRQQTLQGPKLIHTTRHAARGLLAMGDYFSRLRALSSLWVARPQE 164 ENF+RQADLLR QTLQ I TTR AAR LL + DYFSRLRALSSLW+ARP++ Sbjct: 332 ENFLRQADLLRHQTLQQMHRILTTRQAARALLVISDYFSRLRALSSLWLARPRD 385
>tr|A3BAH7|A3BAH7_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_020049 PE=3 SV=1 Length = 463
Score = 77.4 bits (189), Expect = 3e-13 Identities = 39/54 (72%), Positives = 44/54 (81%) Frame = +3
Query: 3 ENFVRQADLLRQQTLQGPKLIHTTRHAARGLLAMGDYFSRLRALSSLWVARPQE 164 ENF+RQADLLR QTLQ I TTR AAR LL + DYFSRLRALSSLW+ARP++ Sbjct: 410 ENFLRQADLLRHQTLQQMHRILTTRQAARALLVISDYFSRLRALSSLWLARPRD 463
>tr|A2YBH9|A2YBH9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_22461 PE=3 SV=1 Length = 464
Score = 77.4 bits (189), Expect = 3e-13 Identities = 39/54 (72%), Positives = 44/54 (81%) Frame = +3
Query: 3 ENFVRQADLLRQQTLQGPKLIHTTRHAARGLLAMGDYFSRLRALSSLWVARPQE 164 ENF+RQADLLR QTLQ I TTR AAR LL + DYFSRLRALSSLW+ARP++ Sbjct: 411 ENFLRQADLLRHQTLQQMHRILTTRQAARALLVISDYFSRLRALSSLWLARPRD 464
>tr|Q9SQK1|Q9SQK1_TOBAC BZIP transcription factor OS=Nicotiana tabacum GN=TGA2.2 PE=1 SV=1 Length = 325
Score = 76.6 bits (187), Expect = 6e-13 Identities = 39/54 (72%), Positives = 44/54 (81%) Frame = +3
Query: 3 ENFVRQADLLRQQTLQGPKLIHTTRHAARGLLAMGDYFSRLRALSSLWVARPQE 164 E F+RQAD LRQQTLQ I TTR +AR LLA+ DYFSRLRALSSLW+ARP+E Sbjct: 272 EGFIRQADNLRQQTLQQMHRILTTRQSARALLAISDYFSRLRALSSLWLARPRE 325
>tr|Q8W5R7|Q8W5R7_ORYSA BZIP transcription factor OS=Oryza sativa GN=OsNIF4 PE=2 SV=1 Length = 332
Score = 76.3 bits (186), Expect = 7e-13 Identities = 39/54 (72%), Positives = 45/54 (83%) Frame = +3
Query: 3 ENFVRQADLLRQQTLQGPKLIHTTRHAARGLLAMGDYFSRLRALSSLWVARPQE 164 ENF+RQAD LR QTLQ + I TTR +AR LLA+ DYFSRLRALSSLW+ARP+E Sbjct: 279 ENFLRQADNLRLQTLQQMQRILTTRQSARALLAISDYFSRLRALSSLWLARPRE 332
>tr|Q6IVC2|Q6IVC2_ORYSJ BZIP transcription factor OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 473
Score = 76.3 bits (186), Expect = 7e-13 Identities = 39/54 (72%), Positives = 45/54 (83%) Frame = +3
Query: 3 ENFVRQADLLRQQTLQGPKLIHTTRHAARGLLAMGDYFSRLRALSSLWVARPQE 164 ENF+RQAD LR QTLQ + I TTR +AR LLA+ DYFSRLRALSSLW+ARP+E Sbjct: 420 ENFLRQADNLRLQTLQQMQRILTTRQSARALLAISDYFSRLRALSSLWLARPRE 473
>tr|Q06979|Q06979_MAIZE Ocs-element binding factor 3.2 OS=Zea mays GN=OBF3.2 PE=2 SV=1 Length = 468
Score = 76.3 bits (186), Expect = 7e-13 Identities = 39/54 (72%), Positives = 45/54 (83%) Frame = +3
Query: 3 ENFVRQADLLRQQTLQGPKLIHTTRHAARGLLAMGDYFSRLRALSSLWVARPQE 164 ENF+RQAD LR QTLQ + I TTR +AR LLA+ DYFSRLRALSSLW+ARP+E Sbjct: 415 ENFLRQADNLRLQTLQQMQRILTTRQSARALLAISDYFSRLRALSSLWLARPRE 468
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