DK957192
Clone id TST39A01NGRL0027_L13
Library
Length 603
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0027_L13. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
AAAACACGCACGCGCGCGCGTACTCTTTCTCCGTCGCTCTGCCTGTCAGCTTAACTCAGA
TCCCTACAGCTCCCTCATCGGCAGCGACGTGCCTCTCCCTCGCAAAGGCCCGCAGCAGTT
TGCCTTGCGGCATTTATAATTTGCCCCTTTTCCTCGCAGGAATATTTGATCCTTACAGTA
AGTAAAGGGCGGCTCGAAGCTTGCCATGGCGTCCTTCACAGCCTCTAGCATATGCTTCAC
ATTTCAAGCGGCGGAAGTCAGCCATGGCAGGTCCTTTGTCAGCAAGCCTTCTTGCAGTGA
AGTTATTACAACTGGACTCAGAAGTAGCGTCTCCAAGCAGGACGTGAAGCTCTGTGAGCA
AGCACAGAGAAGAGGGATTCAGTGCATGGCACAACAGACTGTCTCTCCACTGCTAGAATA
TTCAGAGAGAGCTGATAGTAGCTTCGCATTGCCAACACTGGCTTCATCACCATCATCCCT
GGTAGAATCAGGTCACTATTGGAGTAGCCCTGCCGATGTGCAACCTGCTAGTTCTGGTTC
ATCCTCAAGTCAAGCTGACGCTCTCGGAGGTGTGTCTGTTGCCTCCCTCATGGAACCTGT
TGC
■■Homology search results ■■ -
sp_hit_id Q9FH76
Definition sp|Q9FH76|ABAH3_ARATH Abscisic acid 8'-hydroxylase 3 OS=Arabidopsis thaliana
Align length 55
Score (bit) 30.8
E-value 5.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK957192|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0027_L13, 5'
(603 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9FH76|ABAH3_ARATH Abscisic acid 8'-hydroxylase 3 OS=Arabidop... 31 5.5

>sp|Q9FH76|ABAH3_ARATH Abscisic acid 8'-hydroxylase 3 OS=Arabidopsis
thaliana GN=CYP707A3 PE=1 SV=1
Length = 463

Score = 30.8 bits (68), Expect = 5.5
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = -2

Query: 512 QGYSNSDLILPGMMVMKPVLAMRSYYQLSLNILAVERQSVVPCTESLFSVLAHRA 348
+GY++ + LPG + K + A + Q+ NIL+ RQ+ T+ L S + +A
Sbjct: 204 KGYNSMPINLPGTLFHKAMKARKELAQILANILSKRRQNPSSHTDLLGSFMEDKA 258


tr_hit_id A2R9V2
Definition tr|A2R9V2|A2R9V2_ASPNC Similarity: similarity corresponds to fungal Zn(2)-Cys(6) binuclear cluster domain OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513)
Align length 151
Score (bit) 34.3
E-value 5.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK957192|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0027_L13, 5'
(603 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A2R9V2|A2R9V2_ASPNC Similarity: similarity corresponds to fun... 34 5.7
tr|A3GGD8|A3GGD8_PICST Possible regulatory protein OS=Pichia sti... 34 7.5
tr|Q8R1A5|Q8R1A5_MOUSE Sh3tc1 protein (Fragment) OS=Mus musculus... 33 9.8
tr|Q6KAR4|Q6KAR4_MOUSE MFLJ00164 protein (Fragment) OS=Mus muscu... 33 9.8
tr|Q3UDI4|Q3UDI4_MOUSE Putative uncharacterized protein OS=Mus m... 33 9.8
tr|Q3TXV8|Q3TXV8_MOUSE Putative uncharacterized protein OS=Mus m... 33 9.8

>tr|A2R9V2|A2R9V2_ASPNC Similarity: similarity corresponds to fungal
Zn(2)-Cys(6) binuclear cluster domain OS=Aspergillus
niger (strain CBS 513.88 / FGSC A1513) GN=An18g00320
PE=4 SV=1
Length = 608

Score = 34.3 bits (77), Expect = 5.7
Identities = 43/151 (28%), Positives = 61/151 (40%), Gaps = 19/151 (12%)
Frame = +3

Query: 6 THARAYSFSVALPVSLTQIPT--APSSAATCLSLAKARSSLPCGIYNLPLFLAGIFDPYS 179
T+ YSF P L + PT A S + L L+ S + + +LP + I +
Sbjct: 45 TYGIDYSFHNITPTKLQRQPTTLAESPRSALLPLSSVPSKVAVELRHLPR--SCISHQLT 102

Query: 180 K*RAARSLPWRPSQPLAYASHFKR--RKSAMAGPLSAS---------------LLAVKLL 308
+ R ARSL + Y SHF+R R A PL ++ + A L
Sbjct: 103 RARIARSLDCGENLETCYLSHFQRHVRYLLPASPLPSATATFHSPYLRAAVLCISASNLS 162

Query: 309 QLDSEVASPSRT*SSVSKHREEGFSAWHNRL 401
LD++V S V HR+ FS N L
Sbjct: 163 MLDAQVQSR----ILVGSHRQSSFSPLVNSL 189


>tr|A3GGD8|A3GGD8_PICST Possible regulatory protein OS=Pichia
stipitis GN=PICST_64902 PE=4 SV=1
Length = 675

Score = 33.9 bits (76), Expect = 7.5
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +3

Query: 3 NTHARAYSFSVALPVSLTQIPTAPSSAATCLSLAKARSSLPCGIYNLPLFLAGI 164
NT R+++ S PV+LT++ P S+ ++RS + NLPL LAG+
Sbjct: 179 NTPLRSHTSSALSPVALTKVSKTPHSSKV-KGHTRSRSRMSIDALNLPLSLAGV 231


>tr|Q8R1A5|Q8R1A5_MOUSE Sh3tc1 protein (Fragment) OS=Mus musculus
GN=Sh3tc1 PE=2 SV=1
Length = 1150

Score = 33.5 bits (75), Expect = 9.8
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Frame = +3

Query: 72 PSSAATCLSLAK--ARSSLPCGIYNLPLFLAGIFDPYSK*RAARSLPWRPSQPL--AYAS 239
P A +CL ++ R SLP + ++ L L + P S+ RA SLP + + L A AS
Sbjct: 668 PHLALSCLRVSSLWTRCSLPGSLRSVDLVLQNVPGPNSQRRAGHSLPSQIAYYLRQALAS 727

Query: 240 HFKRRKSAMAGPLSASL 290
A+ GPL ASL
Sbjct: 728 LAPGTGQALRGPLYASL 744


>tr|Q6KAR4|Q6KAR4_MOUSE MFLJ00164 protein (Fragment) OS=Mus musculus
GN=Sh3tc1 PE=2 SV=1
Length = 1012

Score = 33.5 bits (75), Expect = 9.8
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Frame = +3

Query: 72 PSSAATCLSLAK--ARSSLPCGIYNLPLFLAGIFDPYSK*RAARSLPWRPSQPL--AYAS 239
P A +CL ++ R SLP + ++ L L + P S+ RA SLP + + L A AS
Sbjct: 392 PHLALSCLRVSSLWTRCSLPGSLRSVDLVLQNVPGPNSQRRAGHSLPSQIAYYLRQALAS 451

Query: 240 HFKRRKSAMAGPLSASL 290
A+ GPL ASL
Sbjct: 452 LAPGTGQALRGPLYASL 468


>tr|Q3UDI4|Q3UDI4_MOUSE Putative uncharacterized protein OS=Mus
musculus GN=Sh3tc1 PE=2 SV=1
Length = 1346

Score = 33.5 bits (75), Expect = 9.8
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Frame = +3

Query: 72 PSSAATCLSLAK--ARSSLPCGIYNLPLFLAGIFDPYSK*RAARSLPWRPSQPL--AYAS 239
P A +CL ++ R SLP + ++ L L + P S+ RA SLP + + L A AS
Sbjct: 726 PHLALSCLRVSSLWTRCSLPGSLRSVDLVLQNVPGPNSQRRAGHSLPSQIAYYLRQALAS 785

Query: 240 HFKRRKSAMAGPLSASL 290
A+ GPL ASL
Sbjct: 786 LAPGTGQALRGPLYASL 802


>tr|Q3TXV8|Q3TXV8_MOUSE Putative uncharacterized protein OS=Mus
musculus GN=Sh3tc1 PE=2 SV=1
Length = 1346

Score = 33.5 bits (75), Expect = 9.8
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Frame = +3

Query: 72 PSSAATCLSLAK--ARSSLPCGIYNLPLFLAGIFDPYSK*RAARSLPWRPSQPL--AYAS 239
P A +CL ++ R SLP + ++ L L + P S+ RA SLP + + L A AS
Sbjct: 726 PHLALSCLRVSSLWTRCSLPGSLRSVDLVLQNVPGPNSQRRAGHSLPSQIAYYLRQALAS 785

Query: 240 HFKRRKSAMAGPLSASL 290
A+ GPL ASL
Sbjct: 786 LAPGTGQALRGPLYASL 802