DK957211 |
Clone id |
TST39A01NGRL0027_M08 |
Library |
TST39 |
Length |
521 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0027_M08. 5' end sequence. |
Accession |
DK957211 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL825Contig1 |
Sequence |
CAGAACTTGTTTCAAGGAGCGCCATGGCCCCCGATCCTCAGCAAAACGGCACTGTGGAGA AGTCCACGCAGCCACCGCCTACCAAGGAACCGAAGAAGCTGAAAAAAGAGGAGAAGAAAG ACGAAGACTTGTCTGAGGAGGATCTTGCATTAAAACAACAGCTGGAACTATATGTGGAGC GAGCACAAGACTCTGATCCAGGCGTGCAGAAGCTTGCTCTTGAAAGCATGAGACAAGAGA TTCGCACTGCTACGAGCTCAATGACGTCTGTTCCTAAGCCTCTCAAATTTTTGCGACCTC ATTATGGTACTTTGAAGAAGTTTTATGAAACCATGGCAGAGGGTGACTTGAAGAGATATT TGGCTGACATCATCTCAGTATTAGCTTTGACCATGTCAGAGGAAGGAGAAAGGGAAAGTC TGAAGTTCAGGCTGCTGGGATCTGTAGAGGACATTGGTTCTTGGGGACATGAGTATGTAA GAAATCTTGCTGGAGAGATAGGTGTCGAGTTTCAAACTCGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5R9I6 |
Definition |
sp|Q5R9I6|PSMD2_PONAB 26S proteasome non-ATPase regulatory subunit 2 OS=Pongo abelii |
Align length |
119 |
Score (bit) |
153.0 |
E-value |
5.0e-37 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LRR7 |
Definition |
tr|B8LRR7|B8LRR7_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
122 |
Score (bit) |
206.0 |
E-value |
4.0e-52 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957211|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0027_M08, 5' (521 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LRR7|B8LRR7_PICSI Putative uncharacterized protein OS=Picea... 206 4e-52 tr|A7PJ90|A7PJ90_VITVI Chromosome chr12 scaffold_18, whole genom... 205 1e-51 tr|Q6Z2Z3|Q6Z2Z3_ORYSJ Os02g0146700 protein OS=Oryza sativa subs... 204 2e-51 tr|B8AHQ9|B8AHQ9_ORYSI Putative uncharacterized protein OS=Oryza... 204 2e-51 tr|A3A343|A3A343_ORYSJ Putative uncharacterized protein OS=Oryza... 204 2e-51 tr|A3BF32|A3BF32_ORYSJ Putative uncharacterized protein OS=Oryza... 204 3e-51 tr|B8BEG9|B8BEG9_ORYSI Putative uncharacterized protein OS=Oryza... 203 4e-51 tr|A2YGN8|A2YGN8_ORYSI Putative uncharacterized protein OS=Oryza... 203 5e-51 tr|Q6K2Q1|Q6K2Q1_ORYSJ Os09g0326800 protein OS=Oryza sativa subs... 201 2e-50 tr|A9U198|A9U198_PHYPA Predicted protein OS=Physcomitrella paten... 196 4e-49 tr|A9RDZ2|A9RDZ2_PHYPA Predicted protein OS=Physcomitrella paten... 193 4e-48 tr|Q9SIV2|Q9SIV2_ARATH 26S proteasome regulatory subunit S2 (RPN... 192 1e-47 tr|A3BXH7|A3BXH7_ORYSJ Putative uncharacterized protein OS=Oryza... 185 1e-45 tr|Q6XJG8|Q6XJG8_ARATH 26S proteasome subunit RPN1b OS=Arabidops... 184 3e-45 tr|O49456|O49456_ARATH Putative uncharacterized protein F20O9.15... 169 6e-41 tr|Q5Z854|Q5Z854_ORYSJ Putative 26S proteasome regulatory subuni... 164 3e-39 tr|Q5ZLU4|Q5ZLU4_CHICK Putative uncharacterized protein OS=Gallu... 153 6e-36 tr|Q5ZIM4|Q5ZIM4_CHICK Putative uncharacterized protein (Fragmen... 153 6e-36 tr|Q9NSM5|Q9NSM5_HUMAN Putative uncharacterized protein DKFZp564... 153 6e-36 tr|Q59EG8|Q59EG8_HUMAN Proteasome 26S non-ATPase subunit 2 varia... 153 6e-36 tr|Q53XQ4|Q53XQ4_HUMAN Proteasome (Prosome, macropain) 26S subun... 153 6e-36 tr|Q6NTK4|Q6NTK4_XENLA MGC83233 protein OS=Xenopus laevis GN=MGC... 150 3e-35 tr|Q4KLW5|Q4KLW5_XENLA MGC83233 protein OS=Xenopus laevis GN=psm... 150 3e-35 tr|Q5EB37|Q5EB37_XENTR MGC97650 protein OS=Xenopus tropicalis GN... 150 4e-35 tr|A4S2C3|A4S2C3_OSTLU Predicted protein OS=Ostreococcus lucimar... 150 4e-35 tr|Q6NTP6|Q6NTP6_XENLA Putative uncharacterized protein OS=Xenop... 150 5e-35 tr|Q3U9Y8|Q3U9Y8_MOUSE Putative uncharacterized protein OS=Mus m... 150 5e-35 tr|Q3TWL6|Q3TWL6_MOUSE Putative uncharacterized protein OS=Mus m... 150 5e-35 tr|Q3TW71|Q3TW71_MOUSE Putative uncharacterized protein OS=Mus m... 150 5e-35 tr|Q3TKV1|Q3TKV1_MOUSE Putative uncharacterized protein OS=Mus m... 150 5e-35
>tr|B8LRR7|B8LRR7_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 892
Score = 206 bits (525), Expect = 4e-52 Identities = 104/122 (85%), Positives = 109/122 (89%) Frame = +3
Query: 156 QQLELYVERAQDSDPGVQKLALESMRQEIRTATSSMTSVPKPLKFLRPHYGTLKKFYETM 335 QQLELYVER QD DPGVQKLALESMRQEIRTATSSMTSVPKPLKFLRPHYGTLK +YETM Sbjct: 43 QQLELYVERVQDVDPGVQKLALESMRQEIRTATSSMTSVPKPLKFLRPHYGTLKAYYETM 102
Query: 336 AEGDLKRYLADIISVLALTMSEEGERESLKFRLLGSVEDIGSWGHEYVRNLAGEIGVEFQ 515 + D+K YLADI+SVLALTMS EGERESLKFRLLGS DIGSWGHEYVRN AGEI E+Q Sbjct: 103 EDSDVKNYLADILSVLALTMSAEGERESLKFRLLGSKGDIGSWGHEYVRNHAGEIAQEYQ 162
Query: 516 TR 521 R Sbjct: 163 KR 164
>tr|A7PJ90|A7PJ90_VITVI Chromosome chr12 scaffold_18, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00018640001 PE=4 SV=1 Length = 629
Score = 205 bits (522), Expect = 1e-51 Identities = 102/122 (83%), Positives = 109/122 (89%) Frame = +3
Query: 156 QQLELYVERAQDSDPGVQKLALESMRQEIRTATSSMTSVPKPLKFLRPHYGTLKKFYETM 335 QQLELYVER QDSDPG+QK+ALESMRQEIRTATSSMTSVPKPLKFLRPHYG LK FYETM Sbjct: 45 QQLELYVERVQDSDPGLQKMALESMRQEIRTATSSMTSVPKPLKFLRPHYGALKSFYETM 104
Query: 336 AEGDLKRYLADIISVLALTMSEEGERESLKFRLLGSVEDIGSWGHEYVRNLAGEIGVEFQ 515 + DLK+YLADI+SVLALTMS EGE ESLK+RLLGS DIGSWGHEYVRNLAGEI E+ Sbjct: 105 GDSDLKKYLADILSVLALTMSAEGELESLKYRLLGSEGDIGSWGHEYVRNLAGEISQEYA 164
Query: 516 TR 521 R Sbjct: 165 KR 166
>tr|Q6Z2Z3|Q6Z2Z3_ORYSJ Os02g0146700 protein OS=Oryza sativa subsp. japonica GN=OJ1008_C03.11 PE=2 SV=1 Length = 898
Score = 204 bits (519), Expect = 2e-51 Identities = 104/123 (84%), Positives = 112/123 (91%), Gaps = 1/123 (0%) Frame = +3
Query: 156 QQLELYVERAQDSDPGVQKLALESMRQEIRTATSSMTSVPKPLKFLRPHYGTLKKFYETM 335 +QLELYV RAQD+DPGVQKLALESMRQEIR+ATSSMTSVPKPLKFLRPHYGTLK ++ETM Sbjct: 51 EQLELYVVRAQDADPGVQKLALESMRQEIRSATSSMTSVPKPLKFLRPHYGTLKSYFETM 110
Query: 336 AE-GDLKRYLADIISVLALTMSEEGERESLKFRLLGSVEDIGSWGHEYVRNLAGEIGVEF 512 E DLKRY+ADI+SVLALTMS EGERESLK+RLLGS DIGSWGHEYVRNLAGEI EF Sbjct: 111 PESSDLKRYMADILSVLALTMSAEGERESLKYRLLGSEGDIGSWGHEYVRNLAGEIAQEF 170
Query: 513 QTR 521 Q R Sbjct: 171 QKR 173
>tr|B8AHQ9|B8AHQ9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_05840 PE=4 SV=1 Length = 898
Score = 204 bits (519), Expect = 2e-51 Identities = 104/123 (84%), Positives = 112/123 (91%), Gaps = 1/123 (0%) Frame = +3
Query: 156 QQLELYVERAQDSDPGVQKLALESMRQEIRTATSSMTSVPKPLKFLRPHYGTLKKFYETM 335 +QLELYV RAQD+DPGVQKLALESMRQEIR+ATSSMTSVPKPLKFLRPHYGTLK ++ETM Sbjct: 51 EQLELYVVRAQDADPGVQKLALESMRQEIRSATSSMTSVPKPLKFLRPHYGTLKSYFETM 110
Query: 336 AE-GDLKRYLADIISVLALTMSEEGERESLKFRLLGSVEDIGSWGHEYVRNLAGEIGVEF 512 E DLKRY+ADI+SVLALTMS EGERESLK+RLLGS DIGSWGHEYVRNLAGEI EF Sbjct: 111 PESSDLKRYMADILSVLALTMSAEGERESLKYRLLGSEGDIGSWGHEYVRNLAGEIAQEF 170
Query: 513 QTR 521 Q R Sbjct: 171 QKR 173
>tr|A3A343|A3A343_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_005215 PE=4 SV=1 Length = 1454
Score = 204 bits (519), Expect = 2e-51 Identities = 104/123 (84%), Positives = 112/123 (91%), Gaps = 1/123 (0%) Frame = +3
Query: 156 QQLELYVERAQDSDPGVQKLALESMRQEIRTATSSMTSVPKPLKFLRPHYGTLKKFYETM 335 +QLELYV RAQD+DPGVQKLALESMRQEIR+ATSSMTSVPKPLKFLRPHYGTLK ++ETM Sbjct: 537 EQLELYVVRAQDADPGVQKLALESMRQEIRSATSSMTSVPKPLKFLRPHYGTLKSYFETM 596
Query: 336 AE-GDLKRYLADIISVLALTMSEEGERESLKFRLLGSVEDIGSWGHEYVRNLAGEIGVEF 512 E DLKRY+ADI+SVLALTMS EGERESLK+RLLGS DIGSWGHEYVRNLAGEI EF Sbjct: 597 PESSDLKRYMADILSVLALTMSAEGERESLKYRLLGSEGDIGSWGHEYVRNLAGEIAQEF 656
Query: 513 QTR 521 Q R Sbjct: 657 QKR 659
>tr|A3BF32|A3BF32_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_021654 PE=4 SV=1 Length = 873
Score = 204 bits (518), Expect = 3e-51 Identities = 100/122 (81%), Positives = 111/122 (90%) Frame = +3
Query: 156 QQLELYVERAQDSDPGVQKLALESMRQEIRTATSSMTSVPKPLKFLRPHYGTLKKFYETM 335 +QLELYV RAQD+DPGVQKLALESMRQEIR+ATSSMTSVPKPLKFLRPHYGTLK ++ETM Sbjct: 56 EQLELYVVRAQDTDPGVQKLALESMRQEIRSATSSMTSVPKPLKFLRPHYGTLKAYFETM 115
Query: 336 AEGDLKRYLADIISVLALTMSEEGERESLKFRLLGSVEDIGSWGHEYVRNLAGEIGVEFQ 515 E DLK+Y+ADI+SVLALTMS EGERESL +R++GS DIGSWGHEYVRNLAGEI EFQ Sbjct: 116 PESDLKKYMADILSVLALTMSAEGERESLNYRMIGSEGDIGSWGHEYVRNLAGEIAQEFQ 175
Query: 516 TR 521 R Sbjct: 176 KR 177
>tr|B8BEG9|B8BEG9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_30901 PE=4 SV=1 Length = 891
Score = 203 bits (517), Expect = 4e-51 Identities = 100/122 (81%), Positives = 111/122 (90%) Frame = +3
Query: 156 QQLELYVERAQDSDPGVQKLALESMRQEIRTATSSMTSVPKPLKFLRPHYGTLKKFYETM 335 +QLELYV RAQD DPGVQKLALESMRQEIR+ATSSMTSVPKPLKFLRPHYGTLK ++ETM Sbjct: 46 EQLELYVVRAQDPDPGVQKLALESMRQEIRSATSSMTSVPKPLKFLRPHYGTLKAYFETM 105
Query: 336 AEGDLKRYLADIISVLALTMSEEGERESLKFRLLGSVEDIGSWGHEYVRNLAGEIGVEFQ 515 E +LK+Y+ADI+SVLALTMS EGERESLK+R++GS DIGSWGHEYVRNLAGEI EFQ Sbjct: 106 PESELKKYMADILSVLALTMSAEGERESLKYRMIGSEGDIGSWGHEYVRNLAGEIAQEFQ 165
Query: 516 TR 521 R Sbjct: 166 KR 167
>tr|A2YGN8|A2YGN8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_24349 PE=4 SV=1 Length = 901
Score = 203 bits (516), Expect = 5e-51 Identities = 100/122 (81%), Positives = 110/122 (90%) Frame = +3
Query: 156 QQLELYVERAQDSDPGVQKLALESMRQEIRTATSSMTSVPKPLKFLRPHYGTLKKFYETM 335 +QLELYV RAQD DPGVQKLALESMRQEIR+ATSSMTSVPKPLKFLRPHYGTLK ++ETM Sbjct: 56 EQLELYVVRAQDPDPGVQKLALESMRQEIRSATSSMTSVPKPLKFLRPHYGTLKAYFETM 115
Query: 336 AEGDLKRYLADIISVLALTMSEEGERESLKFRLLGSVEDIGSWGHEYVRNLAGEIGVEFQ 515 E DLK+Y+ADI+SVLALTMS EGERESL +R++GS DIGSWGHEYVRNLAGEI EFQ Sbjct: 116 PESDLKKYMADILSVLALTMSAEGERESLNYRMIGSEGDIGSWGHEYVRNLAGEIAQEFQ 175
Query: 516 TR 521 R Sbjct: 176 KR 177
>tr|Q6K2Q1|Q6K2Q1_ORYSJ Os09g0326800 protein OS=Oryza sativa subsp. japonica GN=P0706E03.1 PE=2 SV=1 Length = 891
Score = 201 bits (511), Expect = 2e-50 Identities = 99/122 (81%), Positives = 110/122 (90%) Frame = +3
Query: 156 QQLELYVERAQDSDPGVQKLALESMRQEIRTATSSMTSVPKPLKFLRPHYGTLKKFYETM 335 +QLELYV RAQD DPGVQKLALESMRQEIR+ATSSMTSVPKPLKFLRPHYG LK ++ETM Sbjct: 46 EQLELYVVRAQDPDPGVQKLALESMRQEIRSATSSMTSVPKPLKFLRPHYGILKAYFETM 105
Query: 336 AEGDLKRYLADIISVLALTMSEEGERESLKFRLLGSVEDIGSWGHEYVRNLAGEIGVEFQ 515 E +LK+Y+ADI+SVLALTMS EGERESLK+R++GS DIGSWGHEYVRNLAGEI EFQ Sbjct: 106 PESELKKYMADILSVLALTMSAEGERESLKYRMIGSEGDIGSWGHEYVRNLAGEIAQEFQ 165
Query: 516 TR 521 R Sbjct: 166 KR 167
>tr|A9U198|A9U198_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_154274 PE=4 SV=1 Length = 873
Score = 196 bits (499), Expect = 4e-49 Identities = 97/122 (79%), Positives = 110/122 (90%) Frame = +3
Query: 156 QQLELYVERAQDSDPGVQKLALESMRQEIRTATSSMTSVPKPLKFLRPHYGTLKKFYETM 335 QQLELYVERAQD++ G+Q+ ALE+MR+EIRTATSSMTSVPKPLKFLRPHY TLK YE M Sbjct: 26 QQLELYVERAQDAEEGIQRAALEAMRKEIRTATSSMTSVPKPLKFLRPHYKTLKTHYEVM 85
Query: 336 AEGDLKRYLADIISVLALTMSEEGERESLKFRLLGSVEDIGSWGHEYVRNLAGEIGVEFQ 515 E +LKR++ADIISVLALTMSEEG+RESL++RL G+V DIGSWGHEYVRNLAGEIG EFQ Sbjct: 86 PESELKRFMADIISVLALTMSEEGDRESLRYRLQGTVGDIGSWGHEYVRNLAGEIGNEFQ 145
Query: 516 TR 521 R Sbjct: 146 QR 147
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