DK957223 [AcEST]

DK957223
Clone id	TST39A01NGRL0027_M20
Library	TST39
Length	541
Definition	Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0027_M20. 5' end sequence.
Accession	DK957223
Tissue type	prothallia with plantlets
Developmental stage	gametophytes with sporophytes
Contig ID	CL605Contig1
Sequence	CCCCTCTCTCTCAGAACATTAACACACACATACACGAACGTACTGACTAATTTCCCTCTT CTTCATCTAGGCTCACATACACATACACACCACACACTCACTAATTGCCCACTCTCTGTG GAGGGTCCCTCGCATGCTTTATAGCGGGTTGGGCCTTAATTTTGCCCCTCAAACACCCTC TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTCTCCGTCTCAAGC TCAAGTTTCAGCAGATTCAAGGTTTGTGGGTTTTCAATGGAGGAGCAGAAAATTGAGAAG AAGCAGGAGGAAATCCCTAAAGTAGTGGAGGATGTGAAGGAAGAGGTAGTGGCAGCAGCT GCTGCAGAGGGAAAAGAAGAAGCGAAGAAGCCTATCAATGAAGAAGAAGCGAAGAAGGTA GAGGAAGAGGCGGAAACGGAGGAGAAAGCCCCCCCCAGTGAGTCCCTTACAGAAACCCCC TCTTTCAAAGAGGAGAGCTATAGCGTTGGGGACTTAACCGAGGTAGAGAAAAAGGCCCTG G
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK957223\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0027_M20, 5' (541 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done *** No hits found ****
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	A7QLX0
Definition	tr\|A7QLX0\|A7QLX0_VITVI Chromosome chr18 scaffold_122, whole genome shotgun sequence OS=Vitis vinifera
Align length	27
Score (bit)	35.4
E-value	2.0
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK957223\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0027_M20, 5' (541 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|A7QLX0\|A7QLX0_VITVI Chromosome chr18 scaffold_122, whole geno... 35 2.0 tr\|A5ASS1\|A5ASS1_VITVI Putative uncharacterized protein OS=Vitis... 35 2.0 tr\|A7PKK5\|A7PKK5_VITVI Chromosome chr7 scaffold_20, whole genome... 33 7.4 >tr\|A7QLX0\|A7QLX0_VITVI Chromosome chr18 scaffold_122, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00001819001 PE=4 SV=1 Length = 606 Score = 35.4 bits (80), Expect = 2.0 Identities = 17/27 (62%), Positives = 21/27 (77%) Frame = +1 Query: 460 ESLTETPSFKEESYSVGDLTEVEKKAL 540 E +TE+ SFKEES VGDL E ++KAL Sbjct: 78 EKMTESVSFKEESNVVGDLPESQRKAL 104 >tr\|A5ASS1\|A5ASS1_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_013163 PE=4 SV=1 Length = 595 Score = 35.4 bits (80), Expect = 2.0 Identities = 17/27 (62%), Positives = 21/27 (77%) Frame = +1 Query: 460 ESLTETPSFKEESYSVGDLTEVEKKAL 540 E +TE+ SFKEES VGDL E ++KAL Sbjct: 78 EKMTESVSFKEESNVVGDLPESQRKAL 104 >tr\|A7PKK5\|A7PKK5_VITVI Chromosome chr7 scaffold_20, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019216001 PE=4 SV=1 Length = 452 Score = 33.5 bits (75), Expect = 7.4 Identities = 16/27 (59%), Positives = 19/27 (70%) Frame = +1 Query: 460 ESLTETPSFKEESYSVGDLTEVEKKAL 540 E + ++ SFKEES V DL E EKKAL Sbjct: 72 EKIPQSDSFKEESTRVSDLPETEKKAL 98