DK957229 |
Clone id |
TST39A01NGRL0027_N02 |
Library |
TST39 |
Length |
674 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0027_N02. 5' end sequence. |
Accession |
DK957229 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL57Contig1 |
Sequence |
GTTTCTGCCTTTCCGCTGCTACAGCCATGGCGTGTTTCGCTGCTGCTTCCGCAGCCATCT CCTCCTCCTCTTTTGCCGATGTCTCGGCTAAATTATGTTTCTCCTCTTCTTCCTCCGTTT CTGGCTCTCGCCTTTGCGCACCTGTCTCTCTAACGGTTCCTTCCTCCCGCGCCCGCTCGT CGTCCGTGTCTGCTGCACTGTATTCTGATTCCTCATATGACCTTTCCTCCTTCAAGTTTG AGCCCATTCGGGAATCCATTGTTGCCCGTGAGATGACCCGCCGCTACATGACAGACATGA TCACCCATGCAGACACTGATGTTGTGGTTGTGGGTGCTGGTTCTGCTGGCCTGTCATGTG CGTATGAGCTCAGCAAGAACCCCAACGTCAAGGTTGCCATTGTGGAGCAGTCTGTAAGCC CAGGTGGTGGAGCTTGGCTCGGTGGGCAGCTCTTCTCTGCCATGATTGTAAGGAAGCCAG CCCACCTCTTCCTTGATGAGATTGGTGTGCCCTACGATGAGAAGGATACCTATGTTGTTA TCAAGCATGCTGCGCTCTTCACATCCACCATCATGAGCAAGCTTCTGGCCAGGCCAAATG TGAAGCTCTTTAATGCGGTTGCTGCAGAGGATCTGATAATTAAGGAGAATCGTGTAGCGG GTGTGGTCACAAAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O23787 |
Definition |
sp|O23787|THI4_CITSI Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis |
Align length |
148 |
Score (bit) |
259.0 |
E-value |
1.0e-68 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957229|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0027_N02, 5' (674 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|O23787|THI4_CITSI Thiazole biosynthetic enzyme, chloroplastic... 259 1e-68 sp|Q38814|THI4_ARATH Thiazole biosynthetic enzyme, chloroplastic... 258 3e-68 sp|Q41739|THI42_MAIZE Thiazole biosynthetic enzyme 1-2, chloropl... 249 1e-65 sp|Q41738|THI41_MAIZE Thiazole biosynthetic enzyme 1-1, chloropl... 245 2e-64 sp|Q38709|THI4_ALNGL Thiazole biosynthetic enzyme, chloroplastic... 243 9e-64 sp|P40998|THI2_SCHPO Thiazole biosynthetic enzyme, mitochondrial... 199 1e-50 sp|P23618|THI4_FUSOX Thiazole biosynthetic enzyme, mitochondrial... 193 6e-49 sp|P23617|THI4_FUSSH Thiazole biosynthetic enzyme, mitochondrial... 187 3e-47 sp|Q9UUZ9|THI4_ASPOR Thiazole biosynthetic enzyme, mitochondrial... 186 1e-46 sp|P32318|THI4_YEAST Thiazole biosynthetic enzyme, mitochondrial... 183 6e-46 sp|Q9UVF8|THI4_UROFA Thiazole biosynthetic enzyme, mitochondrial... 179 2e-44 sp|O59082|THI4_PYRHO Putative thiazole biosynthetic enzyme OS=Py... 103 6e-22 sp|Q9V0J8|THI4_PYRAB Putative thiazole biosynthetic enzyme OS=Py... 100 5e-21 sp|Q8U0Q5|THI4_PYRFU Putative thiazole biosynthetic enzyme OS=Py... 97 6e-20 sp|Q5JD25|THI4_PYRKO Putative thiazole biosynthetic enzyme OS=Py... 93 1e-18 sp|Q9WZP4|THI4_THEMA Putative thiazole biosynthetic enzyme OS=Th... 92 2e-18 sp|O27657|THI4_METTH Putative thiazole biosynthetic enzyme OS=Me... 83 1e-15 sp|Q9Y9Z0|THI4_AERPE Putative thiazole biosynthetic enzyme OS=Ae... 80 1e-14 sp|Q8TM19|THI4_METAC Putative thiazole biosynthetic enzyme OS=Me... 79 2e-14 sp|Q9HMC7|THI4_HALSA Putative thiazole biosynthetic enzyme OS=Ha... 78 5e-14 sp|Q8Q0B5|THI4_METMA Putative thiazole biosynthetic enzyme OS=Me... 77 6e-14 sp|Q18KP1|THI4_HALWD Putative thiazole biosynthetic enzyme OS=Ha... 77 8e-14 sp|Q46AR1|THI4_METBF Putative thiazole biosynthetic enzyme OS=Me... 76 1e-13 sp|A3CXS4|THI4_METMJ Putative thiazole biosynthetic enzyme OS=Me... 74 9e-13 sp|Q6LXJ8|THI4_METMP Putative thiazole biosynthetic enzyme OS=Me... 73 1e-12 sp|Q97ZY5|THI4_SULSO Putative thiazole biosynthetic enzyme OS=Su... 72 3e-12 sp|Q4JAF8|THI4_SULAC Putative thiazole biosynthetic enzyme OS=Su... 72 3e-12 sp|Q58018|THI4_METJA Putative thiazole biosynthetic enzyme OS=Me... 70 8e-12 sp|Q3V7Z9|THI4_HALMA Putative thiazole biosynthetic enzyme OS=Ha... 69 2e-11 sp|Q12U93|THI4_METBU Putative thiazole biosynthetic enzyme OS=Me... 69 3e-11
>sp|O23787|THI4_CITSI Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis GN=THI1 PE=2 SV=1 Length = 356
Score = 259 bits (661), Expect = 1e-68 Identities = 125/148 (84%), Positives = 139/148 (93%) Frame = +3
Query: 231 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKNPNVKVAIVEQ 410 FKF+PI+ESIV+REMTRRYMTDMIT+ADTD GAGSAGLSCAYELSKNPN+++AI+EQ Sbjct: 63 FKFDPIKESIVSREMTRRYMTDMITYADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQ 122
Query: 411 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLLA 590 SVSPGGGAWLGGQLFSAM+VRKPAH+FLDE+G+ YDE+D YVVIKHAALFTSTIMSKLLA Sbjct: 123 SVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLA 182
Query: 591 RPNVKLFNAVAAEDLIIKENRVAGVVTN 674 RPNVKLFNAVAAEDLI+K RV GVVTN Sbjct: 183 RPNVKLFNAVAAEDLIVKGGRVGGVVTN 210
>sp|Q38814|THI4_ARATH Thiazole biosynthetic enzyme, chloroplastic OS=Arabidopsis thaliana GN=THI1 PE=1 SV=1 Length = 349
Score = 258 bits (658), Expect = 3e-68 Identities = 128/148 (86%), Positives = 139/148 (93%) Frame = +3
Query: 231 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKNPNVKVAIVEQ 410 F F+PI+ESIV+REMTRRYMTDMIT+A+TD GAGSAGLS AYE+SKNPNV+VAI+EQ Sbjct: 56 FTFDPIKESIVSREMTRRYMTDMITYAETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQ 115
Query: 411 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLLA 590 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGV YDE+DTYVV+KHAALFTSTIMSKLLA Sbjct: 116 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAALFTSTIMSKLLA 175
Query: 591 RPNVKLFNAVAAEDLIIKENRVAGVVTN 674 RPNVKLFNAVAAEDLI+K NRV GVVTN Sbjct: 176 RPNVKLFNAVAAEDLIVKGNRVGGVVTN 203
>sp|Q41739|THI42_MAIZE Thiazole biosynthetic enzyme 1-2, chloroplastic OS=Zea mays GN=THI1-2 PE=2 SV=1 Length = 354
Score = 249 bits (635), Expect = 1e-65 Identities = 121/148 (81%), Positives = 134/148 (90%) Frame = +3
Query: 231 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKNPNVKVAIVEQ 410 F+F PI+ESIV+REMTRRYMTDMITHADTD GAGSAGLSCAYELSK+P V VAIVEQ Sbjct: 59 FRFSPIKESIVSREMTRRYMTDMITHADTDVVIVGAGSAGLSCAYELSKDPTVSVAIVEQ 118
Query: 411 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLLA 590 SVSPGGGAWLGGQLFSAM+VR+PAHLFLDE+GV YDE + YVV+KHAALFTST+MS+LLA Sbjct: 119 SVSPGGGAWLGGQLFSAMVVRRPAHLFLDELGVGYDEAEDYVVVKHAALFTSTVMSRLLA 178
Query: 591 RPNVKLFNAVAAEDLIIKENRVAGVVTN 674 RPNVKLFNAVA EDLI++ RV GVVTN Sbjct: 179 RPNVKLFNAVAVEDLIVRRGRVGGVVTN 206
>sp|Q41738|THI41_MAIZE Thiazole biosynthetic enzyme 1-1, chloroplastic OS=Zea mays GN=THI1-1 PE=2 SV=1 Length = 354
Score = 245 bits (625), Expect = 2e-64 Identities = 121/148 (81%), Positives = 133/148 (89%) Frame = +3
Query: 231 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKNPNVKVAIVEQ 410 F+F PI+ESIV+REMTRRYMTDMIT+ADTD GAGSAGLSCAYELSK+P V +AIVEQ Sbjct: 62 FRFSPIKESIVSREMTRRYMTDMITYADTDVVIVGAGSAGLSCAYELSKDPAVSIAIVEQ 121
Query: 411 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLLA 590 SVSPGGGAWLGGQLFSAM+VRKPAHLFLDE+GV YDE + YVVIKHAALFTST+MS LLA Sbjct: 122 SVSPGGGAWLGGQLFSAMVVRKPAHLFLDELGVAYDEAEDYVVIKHAALFTSTVMSLLLA 181
Query: 591 RPNVKLFNAVAAEDLIIKENRVAGVVTN 674 RPNVKLFNAVA EDLI++ RV GVVTN Sbjct: 182 RPNVKLFNAVAVEDLIVRGGRVGGVVTN 209
>sp|Q38709|THI4_ALNGL Thiazole biosynthetic enzyme, chloroplastic OS=Alnus glutinosa GN=THI4 PE=2 SV=1 Length = 352
Score = 243 bits (619), Expect = 9e-64 Identities = 121/148 (81%), Positives = 134/148 (90%) Frame = +3
Query: 231 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKNPNVKVAIVEQ 410 F F+PI+ESIV+REMTRRYM DMIT+ADTD GAGS+GL C YELSKNP+V+VAI+EQ Sbjct: 60 FTFDPIKESIVSREMTRRYMMDMITYADTDVVVVGAGSSGLVC-YELSKNPSVQVAIIEQ 118
Query: 411 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLLA 590 SVSPGGGAWLGGQLFS M+VRKPAHLFLDE+G+ YDE+D YVVIKHAALFTSTIMSKLLA Sbjct: 119 SVSPGGGAWLGGQLFSGMVVRKPAHLFLDELGIEYDEQDNYVVIKHAALFTSTIMSKLLA 178
Query: 591 RPNVKLFNAVAAEDLIIKENRVAGVVTN 674 RPNVKLFNAVAAEDLI+K RV GVVTN Sbjct: 179 RPNVKLFNAVAAEDLIVKGGRVGGVVTN 206
>sp|P40998|THI2_SCHPO Thiazole biosynthetic enzyme, mitochondrial OS=Schizosaccharomyces pombe GN=thi2 PE=2 SV=2 Length = 328
Score = 199 bits (505), Expect = 1e-50 Identities = 99/154 (64%), Positives = 125/154 (81%), Gaps = 6/154 (3%) Frame = +3
Query: 231 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYEL-SKNPNVKVAIVE 407 F F PIRES V+R MTRRY +D+ +A++D GAGSAGL+ AY + ++ P++K+AI+E Sbjct: 49 FSFAPIRESTVSRAMTRRYFSDLDKYAESDIVIVGAGSAGLTAAYYIGTRRPDLKIAIIE 108
Query: 408 QSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLL 587 SV+PGGGAWLGGQLFSAM+VRKPA LFL+EIGVPY+++ YVV+KHAALFTST+M++ L Sbjct: 109 ASVAPGGGAWLGGQLFSAMVVRKPADLFLNEIGVPYEDEGDYVVVKHAALFTSTVMARTL 168
Query: 588 ARPNVKLFNAVAAEDLIIKE-----NRVAGVVTN 674 A PNVKLFNA A EDLI+KE R+AGVVTN Sbjct: 169 ALPNVKLFNATAVEDLIVKEGKDGKQRIAGVVTN 202
>sp|P23618|THI4_FUSOX Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium oxysporum GN=STI35 PE=2 SV=2 Length = 320
Score = 193 bits (491), Expect = 6e-49 Identities = 99/153 (64%), Positives = 119/153 (77%), Gaps = 5/153 (3%) Frame = +3
Query: 231 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKN-PNVKVAIVE 407 FKF PIRES V+R MTRRY D+ +A++D GAGS GLS AY L K P++K+AI+E Sbjct: 44 FKFAPIRESQVSRAMTRRYFQDLDNYAESDIVIIGAGSCGLSAAYILGKKRPDLKIAIIE 103
Query: 408 QSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLL 587 SVSPGGGAWLGGQLFSAMI+RKPA FL E+GVPY+++ YVV+KHAALFTSTIMSK+L Sbjct: 104 ASVSPGGGAWLGGQLFSAMIMRKPADAFLREVGVPYEDEGNYVVVKHAALFTSTIMSKVL 163
Query: 588 ARPNVKLFNAVAAEDLIIKEN----RVAGVVTN 674 PN+KLFNA EDLI + + R+AGVVTN Sbjct: 164 QMPNIKLFNATCVEDLITRPSEEGVRIAGVVTN 196
>sp|P23617|THI4_FUSSH Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium solani subsp. phaseoli GN=STI35 PE=2 SV=1 Length = 324
Score = 187 bits (476), Expect = 3e-47 Identities = 96/153 (62%), Positives = 117/153 (76%), Gaps = 5/153 (3%) Frame = +3
Query: 231 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKN-PNVKVAIVE 407 FKF PIRES V+R MTRRY D+ +A++D GAGS GLS Y L K P++K+AI+E Sbjct: 48 FKFAPIRESQVSRAMTRRYFQDLDNYAESDIVIVGAGSCGLSTRYILGKKRPDLKIAIIE 107
Query: 408 QSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLL 587 SVSPGGGAWLGGQLFSAM++RKPA FL E+GVPY+++ YVV+KHAALFTSTIMSK+L Sbjct: 108 ASVSPGGGAWLGGQLFSAMVMRKPADAFLREVGVPYEDEGNYVVVKHAALFTSTIMSKVL 167
Query: 588 ARPNVKLFNAVAAEDLIIKEN----RVAGVVTN 674 PN KLFNA EDLI + + R++GVVTN Sbjct: 168 QLPNCKLFNATCVEDLITRPSKEGVRISGVVTN 200
>sp|Q9UUZ9|THI4_ASPOR Thiazole biosynthetic enzyme, mitochondrial OS=Aspergillus oryzae GN=thiA PE=3 SV=2 Length = 327
Score = 186 bits (472), Expect = 1e-46 Identities = 99/156 (63%), Positives = 123/156 (78%), Gaps = 8/156 (5%) Frame = +3
Query: 231 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSK-NPNVKVAIVE 407 FKF PIRES V+R MTRRY D+ +A++D GAGS GLS AY L+K P++K+AIVE Sbjct: 48 FKFAPIRESQVSRAMTRRYFEDLDKYAESDVVIVGAGSCGLSTAYVLAKARPDLKIAIVE 107
Query: 408 QSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDE--KDTYVVIKHAALFTSTIMSK 581 SVSPGGGAWLGGQLFSAM++R+PA +FL+E+GVPY+E YVV+KHA+LFTST+MSK Sbjct: 108 ASVSPGGGAWLGGQLFSAMVMRRPAEVFLNELGVPYEEDANPNYVVVKHASLFTSTLMSK 167
Query: 582 LLARPNVKLFNAVAAEDLIIK--EN---RVAGVVTN 674 +L+ PNVKLFNA A EDLI + EN ++AGVV N Sbjct: 168 VLSFPNVKLFNATAVEDLITRPTENGNPQIAGVVVN 203
>sp|P32318|THI4_YEAST Thiazole biosynthetic enzyme, mitochondrial OS=Saccharomyces cerevisiae GN=THI4 PE=1 SV=1 Length = 326
Score = 183 bits (465), Expect = 6e-46 Identities = 93/155 (60%), Positives = 117/155 (75%), Gaps = 7/155 (4%) Frame = +3
Query: 231 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKN-PNVKVAIVE 407 FKF PIRES V+R MT RY D+ A +D GAGS+GLS AY ++KN P++KV I+E Sbjct: 38 FKFAPIRESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIE 97
Query: 408 QSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLL 587 SV+PGGG+WLGGQLFSAM++RKPAHLFL E+ +PY+++ YVV+KHAALF ST++SK+L Sbjct: 98 SSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHAALFISTVLSKVL 157
Query: 588 ARPNVKLFNAVAAEDLIIK------ENRVAGVVTN 674 PNVKLFNA EDL+ + E VAGVVTN Sbjct: 158 QLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTN 192
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NRW5 |
Definition |
tr|A9NRW5|A9NRW5_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
148 |
Score (bit) |
267.0 |
E-value |
4.0e-70 |
Report |
|