DK957272 |
Clone id |
TST39A01NGRL0027_O23 |
Library |
TST39 |
Length |
585 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0027_O23. 5' end sequence. |
Accession |
DK957272 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL233Contig1 |
Sequence |
GAACGAAGGGCTTTGCTTAAGCGGAATTTCCCTCTTAGGGCTACCGGTCAAAAGCTTCAG GCAGCTCAGACGCTCCTTGAGAAGGAGATGCTGCAGATTCTGTTGTAGGTGTGTTCTCTT CACTCCGGTGAAGTGAAGACCGGTGATATGTACAAAGATAGGGGTGATGGGCGTGGTGGA AGCCGTGAATCTATCGATGCTAAGAAGCGCATTGAGGAGACTCTAGAGAGGACATCTCCT TCGACATCCAAGGGAAATGCAAGGGAAAAAGATCGTGTTTCTATGGTGCCTGCATCAACT GGTAGACGCCTAGGCTCTGTTGACTTAAGGCCTACATTTGACAAGACCAAGTATGCAGAC GATGGCGAAGAATCAGAGACTGACAGCGAAGAATCGGATGTTAGTGGATCAGATGGTGAC GACACTTCTTGGGTTTCTTGGTTTTGCGGTTTGAGAGGGAATGAGTTCTTTTGTGAGGTG GACGACGAGTACATTCAGGATGATTTCAATTTAAGTGGACTAAGCAGCCAGGTCCCTTAT TATGAGTATGCACTGGATTTGATTCTGGATGCAGAGTCTCCGAAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P40228 |
Definition |
sp|P40228|CSK2B_ARATH Casein kinase II subunit beta OS=Arabidopsis thaliana |
Align length |
141 |
Score (bit) |
95.9 |
E-value |
1.0e-19 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9T768 |
Definition |
tr|A9T768|A9T768_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
136 |
Score (bit) |
133.0 |
E-value |
6.0e-30 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957272|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0027_O23, 5' (585 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9T768|A9T768_PHYPA Predicted protein OS=Physcomitrella paten... 133 6e-30 tr|A9T5Q0|A9T5Q0_PHYPA Predicted protein OS=Physcomitrella paten... 117 6e-25 tr|B8LPQ3|B8LPQ3_PICSI Putative uncharacterized protein OS=Picea... 108 2e-22 tr|A9RL84|A9RL84_PHYPA Predicted protein OS=Physcomitrella paten... 105 2e-21 tr|A7PK61|A7PK61_VITVI Chromosome chr15 scaffold_19, whole genom... 103 9e-21 tr|A5BGR6|A5BGR6_VITVI Putative uncharacterized protein OS=Vitis... 103 9e-21 tr|A9PJM8|A9PJM8_POPJC Putative uncharacterized protein OS=Popul... 100 6e-20 tr|Q9AY38|Q9AY38_ORYSA Putative casein kinase II beta subunit OS... 100 1e-19 tr|Q336R5|Q336R5_ORYSJ Casein kinase II beta-4 subunit, putative... 100 1e-19 tr|Q0KKA4|Q0KKA4_HORVU Casein kinase II beta OS=Hordeum vulgare ... 100 1e-19 tr|B8BIA2|B8BIA2_ORYSI Putative uncharacterized protein OS=Oryza... 100 1e-19 tr|Q7XC26|Q7XC26_ORYSJ Casein kinase II beta-4 subunit, putative... 99 2e-19 tr|Q336R6|Q336R6_ORYSJ Os10g0564900 protein OS=Oryza sativa subs... 99 2e-19 tr|Q9FQF8|Q9FQF8_MAIZE Protein kinase CK2 regulatory subunit CK2... 98 4e-19 tr|Q2V308|Q2V308_ARATH Uncharacterized protein At5g47080.3 OS=Ar... 97 7e-19 tr|B6T9Z0|B6T9Z0_MAIZE Casein kinase II subunit beta-4 OS=Zea ma... 97 7e-19 tr|Q9FQF7|Q9FQF7_MAIZE Protein kinase CK2 regulatory subunit CK2... 97 9e-19 tr|B6SQ06|B6SQ06_MAIZE Casein kinase II subunit beta-4 OS=Zea ma... 97 9e-19 tr|B4FN07|B4FN07_MAIZE Putative uncharacterized protein OS=Zea m... 97 9e-19 tr|A9S7H2|A9S7H2_PHYPA Predicted protein OS=Physcomitrella paten... 96 1e-18 tr|Q3E8F5|Q3E8F5_ARATH Uncharacterized protein At5g47080.2 OS=Ar... 96 1e-18 tr|Q8LPD2|Q8LPD2_TOBAC Protein kinase Ck2 regulatory subunit 2 O... 94 4e-18 tr|B4FZQ7|B4FZQ7_MAIZE Putative uncharacterized protein OS=Zea m... 94 7e-18 tr|A8HPM0|A8HPM0_CHLRE Casein kinase 2 beta chain, CK2B (Fragmen... 93 1e-17 tr|Q70Z23|Q70Z23_TOBAC Protein kinase 2 beta chain OS=Nicotiana ... 92 3e-17 tr|B7FJF9|B7FJF9_MEDTR Putative uncharacterized protein (Fragmen... 92 3e-17 tr|A3C7E2|A3C7E2_ORYSJ Putative uncharacterized protein OS=Oryza... 92 3e-17 tr|A9PE79|A9PE79_POPTR Putative uncharacterized protein OS=Popul... 91 6e-17 tr|Q9FQF6|Q9FQF6_MAIZE Protein kinase CK2 regulatory subunit CK2... 90 8e-17 tr|Q84VF5|Q84VF5_ORYSJ Possible protein kinase CK2 regulatory su... 90 8e-17
>tr|A9T768|A9T768_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_59578 PE=4 SV=1 Length = 298
Score = 133 bits (335), Expect = 6e-30 Identities = 71/136 (52%), Positives = 86/136 (63%), Gaps = 2/136 (1%) Frame = +1
Query: 184 RESIDAKKRIEETLERTSPSTSKGN-AREKDRVSMVPAST-GRRLGSVDLRPTFDKTKYA 357 R+ D KKR+E+ ++++SPSTS+G REKDR++ A+T RR + RPT +K KY Sbjct: 26 RDVTDNKKRLEDGIDKSSPSTSRGGIGREKDRIAAPAATTQSRRNAGHETRPTMEKAKYP 85
Query: 358 XXXXXXXXXXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLSSQVP 537 FC LRGNEFFCEVDDEYIQDDFNLSGLSSQVP Sbjct: 86 EDAEDSESESEDSDVSASDGEDTSWISWFCSLRGNEFFCEVDDEYIQDDFNLSGLSSQVP 145
Query: 538 YYEYALDLILDAESPN 585 YY+YALDLILD ESP+ Sbjct: 146 YYDYALDLILDVESPS 161
>tr|A9T5Q0|A9T5Q0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_219176 PE=4 SV=1 Length = 299
Score = 117 bits (292), Expect = 6e-25 Identities = 70/139 (50%), Positives = 81/139 (58%), Gaps = 5/139 (3%) Frame = +1
Query: 184 RESIDAKKRIEETLERTSP-STSKGN-AREKDRVSMVPASTGR-RLGSVDLRPTFDKTKY 354 R+ D KKR E + P STSKG REKDR++ + T R +++ RPT +K KY Sbjct: 24 RDVTDNKKRFEGGIPLLQPPSTSKGLIGREKDRIAAAASKTQTSRNAALEARPTLEKAKY 83
Query: 355 AXXXXXXXXXXXXXXXXXXXXXXXXXXXX--FCGLRGNEFFCEVDDEYIQDDFNLSGLSS 528 FCGLRGNEFFCEVDDEYIQDDFNLSGLSS Sbjct: 84 PEDVAAEDSESESEDSDVSASDGEDTSWISWFCGLRGNEFFCEVDDEYIQDDFNLSGLSS 143
Query: 529 QVPYYEYALDLILDAESPN 585 QVPYY+YALDLILD ESP+ Sbjct: 144 QVPYYDYALDLILDVESPS 162
>tr|B8LPQ3|B8LPQ3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 297
Score = 108 bits (270), Expect = 2e-22 Identities = 66/135 (48%), Positives = 73/135 (54%), Gaps = 7/135 (5%) Frame = +1
Query: 202 KKRIEETL------ERTSPSTSKGNAREKDRVSMVPASTGRRL-GSVDLRPTFDKTKYAX 360 +KRI + L E++ PSTSKG R+S+ S GRR G DKT YA Sbjct: 29 RKRINDALDKHLHLEKSPPSTSKGL---NGRLSIPSTSAGRRAPGDSRNASALDKTNYAE 85
Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLSSQVPY 540 FC LRGNEFFCEVDDEYIQDDFNL GLSSQVPY Sbjct: 86 DVEDSDTDSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPY 145
Query: 541 YEYALDLILDAESPN 585 Y+YALDLILD ES N Sbjct: 146 YDYALDLILDVESSN 160
>tr|A9RL84|A9RL84_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_116155 PE=4 SV=1 Length = 249
Score = 105 bits (261), Expect = 2e-21 Identities = 60/128 (46%), Positives = 79/128 (61%), Gaps = 1/128 (0%) Frame = +1
Query: 205 KRIEETLERTSPSTSKG-NAREKDRVSMVPASTGRRLGSVDLRPTFDKTKYAXXXXXXXX 381 KR+++ +E++S STSKG +EKDR++ A+T + L + DL +++ + Sbjct: 2 KRLDDGIEKSSASTSKGWIGKEKDRLAPAAAAT-QILVAEDLESESEESDVSGSDGEDTA 60
Query: 382 XXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLSSQVPYYEYALDL 561 FCGLRGNEFFCE+DDEYIQDDFNLSGL SQVPYY+YALDL Sbjct: 61 WISW----------------FCGLRGNEFFCEIDDEYIQDDFNLSGLRSQVPYYDYALDL 104
Query: 562 ILDAESPN 585 ILD E P+ Sbjct: 105 ILDVEPPS 112
>tr|A7PK61|A7PK61_VITVI Chromosome chr15 scaffold_19, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019032001 PE=4 SV=1 Length = 288
Score = 103 bits (256), Expect = 9e-21 Identities = 60/126 (47%), Positives = 76/126 (60%), Gaps = 3/126 (2%) Frame = +1
Query: 211 IEETLERTSPSTSKG-NAREKDRVSMVPASTGRRLGSVDLRPTFDKT--KYAXXXXXXXX 381 +++ LE++SPSTSKG ++++K+R+S+ S G+ +D R T + K Sbjct: 28 LDKHLEKSSPSTSKGLSSKDKERLSVPSTSAGK--SQLDHRDTRAASLPKNKCSDEESET 85
Query: 382 XXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLSSQVPYYEYALDL 561 FC LRGNEFFCEVDDEYIQDDFNL GLSSQVPYY+YALDL Sbjct: 86 DSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDL 145
Query: 562 ILDAES 579 ILD ES Sbjct: 146 ILDVES 151
>tr|A5BGR6|A5BGR6_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_022015 PE=4 SV=1 Length = 282
Score = 103 bits (256), Expect = 9e-21 Identities = 60/126 (47%), Positives = 76/126 (60%), Gaps = 3/126 (2%) Frame = +1
Query: 211 IEETLERTSPSTSKG-NAREKDRVSMVPASTGRRLGSVDLRPTFDKT--KYAXXXXXXXX 381 +++ LE++SPSTSKG ++++K+R+S+ S G+ +D R T + K Sbjct: 28 LDKHLEKSSPSTSKGLSSKDKERLSVPSTSAGK--SQLDHRDTRAASLPKNKCSDEESET 85
Query: 382 XXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLSSQVPYYEYALDL 561 FC LRGNEFFCEVDDEYIQDDFNL GLSSQVPYY+YALDL Sbjct: 86 DSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPYYDYALDL 145
Query: 562 ILDAES 579 ILD ES Sbjct: 146 ILDVES 151
>tr|A9PJM8|A9PJM8_POPJC Putative uncharacterized protein OS=Populus jackii PE=2 SV=1 Length = 330
Score = 100 bits (249), Expect = 6e-20 Identities = 60/135 (44%), Positives = 76/135 (56%), Gaps = 12/135 (8%) Frame = +1
Query: 211 IEETLERTSPSTSKG---NAREKDRVSMVPASTGRRLGS---------VDLRPTFDKTKY 354 +++ LE++SPSTS+G ++++K+R+S+ STG+ L D R +K Sbjct: 31 LDKHLEKSSPSTSRGLNNSSKDKERLSVPSTSTGKSLQHHQQQLDHHRADSRSA-SLSKN 89
Query: 355 AXXXXXXXXXXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLSSQV 534 FC LRGNEFFCEVDDEYIQDDFNL GLSSQV Sbjct: 90 KCSDEESETDSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQV 149
Query: 535 PYYEYALDLILDAES 579 PYY+YALDLILD ES Sbjct: 150 PYYDYALDLILDVES 164
>tr|Q9AY38|Q9AY38_ORYSA Putative casein kinase II beta subunit OS=Oryza sativa GN=OSJNBa0027P10.8 PE=4 SV=1 Length = 280
Score = 99.8 bits (247), Expect = 1e-19 Identities = 58/128 (45%), Positives = 73/128 (57%) Frame = +1
Query: 202 KKRIEETLERTSPSTSKGNAREKDRVSMVPASTGRRLGSVDLRPTFDKTKYAXXXXXXXX 381 K +E+ L+R+SPSTS+G A K+R + A+ G +L + P K + Sbjct: 23 KDVLEKHLDRSSPSTSRGAAVAKERDRL--AAAGGKLPA----PLGKAGKVSDGAEEFET 76
Query: 382 XXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLSSQVPYYEYALDL 561 FC LRGNEFFCE+DD+YIQDDFNL GLS+QVPYY+YALDL Sbjct: 77 DSEDSDVSGSEGEDTSWISWFCSLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYYDYALDL 136
Query: 562 ILDAESPN 585 ILD ES N Sbjct: 137 ILDIESSN 144
>tr|Q336R5|Q336R5_ORYSJ Casein kinase II beta-4 subunit, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os10g41520 PE=4 SV=2 Length = 280
Score = 99.8 bits (247), Expect = 1e-19 Identities = 58/128 (45%), Positives = 73/128 (57%) Frame = +1
Query: 202 KKRIEETLERTSPSTSKGNAREKDRVSMVPASTGRRLGSVDLRPTFDKTKYAXXXXXXXX 381 K +E+ L+R+SPSTS+G A K+R + A+ G +L + P K + Sbjct: 23 KDVLEKHLDRSSPSTSRGAAVAKERDRL--AAAGGKLPA----PLGKAGKVSDGAEEFET 76
Query: 382 XXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLSSQVPYYEYALDL 561 FC LRGNEFFCE+DD+YIQDDFNL GLS+QVPYY+YALDL Sbjct: 77 DSEDSDVSGSEGEDTSWISWFCSLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYYDYALDL 136
Query: 562 ILDAESPN 585 ILD ES N Sbjct: 137 ILDIESSN 144
>tr|Q0KKA4|Q0KKA4_HORVU Casein kinase II beta OS=Hordeum vulgare GN=Hvck2b PE=2 SV=1 Length = 259
Score = 99.8 bits (247), Expect = 1e-19 Identities = 59/132 (44%), Positives = 76/132 (57%), Gaps = 4/132 (3%) Frame = +1
Query: 202 KKRIEETLE----RTSPSTSKGNAREKDRVSMVPASTGRRLGSVDLRPTFDKTKYAXXXX 369 +KRI+E LE R SPSTS+G +REK+ ++ +T ++G V ++ + Sbjct: 3 RKRIKEALEKHTERPSPSTSRGASREKEMLAAGKITT--QIGKVPKVSDVEEFE------ 54
Query: 370 XXXXXXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLSSQVPYYEY 549 FC LRGNEFFCE+DD+YIQDDFNL GLS+QVPYY+Y Sbjct: 55 ---TDSEDSDVSGSEGEDTSWISWFCSLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYYDY 111
Query: 550 ALDLILDAESPN 585 ALDLILD ES N Sbjct: 112 ALDLILDIESSN 123
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