NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK957294
Clone id TST39A01NGRL0027_P21
Library
Length 576
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0027_P21. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CACATTTCGATATGGCGGACGAAGACTTCAACGACTTTGATGGAGGTGACGCCGGATACG
ATGAGGAGCCGGCTGAACCAGAAGTTGAAGAAGAGGTTGAGGAGGATGCTGAACAAGCTG
CACCCATTGACACACTTGGAGGTGAAGATGTGGAGATGAAGGATGGAGAAACTCCTACTG
ATAAACCTCGTAAGACGACACGGTATATGACAAAATATGAACGCGCTCGGGTCTTGGGTA
CTAGAGCACTGCAGATAAGTATGAATGCGCCTGTGATGGTTGAGCTCGAAGGGGAGACAG
ATCCTCTTGAGATTGCAATGAAGGAGCTTAGAGCTCGGAAGATTCCATTCACGATGAGAC
GCTACTTACCAGATGGAAGTTTTGAGGACTGGGGTGTGGACAAACTCATAGTAGAAGATT
CATGGAAGCGACAAGTGGGTTAAGGAGATCTGGAATAATTTCTGTAATGTCATTGGACAT
TCAGCATCCTTAACACAATCATCATGTGGCCGAATGCTGGACAGTTGGTGCATTTTCAAC
CCTATCATCATCAAAGTGGTGGGACAAATGTCGCTT
■■Homology search results ■■ -
sp_hit_id O88828
Definition sp|O88828|RPAB2_RAT DNA-directed RNA polymerases I, II, and III subunit RPABC2 OS=Rattus norvegicus
Align length 96
Score (bit) 135.0
E-value 1.0e-31
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK957294|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0027_P21, 5'
         (576 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O88828|RPAB2_RAT DNA-directed RNA polymerases I, II, and III ...   135   1e-31
sp|P61219|RPAB2_MOUSE DNA-directed RNA polymerases I, II, and II...   135   1e-31
sp|Q5R592|RPAB2_PONAB DNA-directed RNA polymerases I, II, and II...   135   1e-31
sp|P61218|RPAB2_HUMAN DNA-directed RNA polymerases I, II, and II...   135   1e-31
sp|P61217|RPAB2_CRIGR DNA-directed RNA polymerases I, II, and II...   135   1e-31
sp|Q32PE0|RPAB2_BOVIN DNA-directed RNA polymerases I, II, and II...   132   9e-31
sp|P20435|RPAB2_YEAST DNA-directed RNA polymerases I, II, and II...   128   2e-29
sp|Q54FA8|RPAB2_DICDI DNA-directed RNA polymerases I, II, and II...   125   2e-28
sp|P36595|RPAB2_SCHPO DNA-directed RNA polymerases I, II, and II...   124   3e-28
sp|Q24320|RPAB2_DROME DNA-directed RNA polymerases I, II, and II...   123   6e-28
sp|Q17684|RPAB2_CAEEL Probable DNA-directed RNA polymerases I, I...   119   8e-27
sp|A8WSV7|RPAB2_CAEBR Probable DNA-directed RNA polymerases I, I...   117   3e-26
sp|Q8PW42|RPOK_METMA DNA-directed RNA polymerase subunit K OS=Me...    64   4e-10
sp|Q8TT40|RPOK_METAC DNA-directed RNA polymerase subunit K OS=Me...    63   1e-09
sp|Q9YDJ9|RPOK_AERPE DNA-directed RNA polymerase subunit K OS=Ae...    61   3e-09
sp|A1RWX0|RPOK_THEPD DNA-directed RNA polymerase subunit K OS=Th...    61   5e-09
sp|O29134|RPOK_ARCFU DNA-directed RNA polymerase subunit K OS=Ar...    59   2e-08
sp|Q5UQ32|RPO6_MIMIV DNA-directed RNA polymerase subunit 6 OS=Ac...    59   2e-08
sp|Q8ZTF9|RPOK_PYRAE DNA-directed RNA polymerase subunit K OS=Py...    57   5e-08
sp|O26148|RPOK_METTH DNA-directed RNA polymerase subunit K OS=Me...    57   5e-08
sp|Q6L1M4|RPOK_PICTO DNA-directed RNA polymerase subunit K OS=Pi...    55   2e-07
sp|Q9HQJ0|RPOK_HALSA DNA-directed RNA polymerase subunit K OS=Ha...    55   3e-07
sp|Q97ZJ9|RPOK_SULSO DNA-directed RNA polymerase subunit K OS=Su...    55   3e-07
sp|Q9HJ14|RPOK_THEAC DNA-directed RNA polymerase subunit K OS=Th...    52   2e-06
sp|P58232|RPOK_THEVO DNA-directed RNA polymerase subunit K OS=Th...    52   3e-06
sp|Q8U0E8|RPOK_PYRFU DNA-directed RNA polymerase subunit K OS=Py...    51   4e-06
sp|P62015|RPOK_PYRHO DNA-directed RNA polymerase subunit K OS=Py...    50   6e-06
sp|P62014|RPOK_PYRAB DNA-directed RNA polymerase subunit K OS=Py...    50   6e-06
sp|P39463|RPOK_SULAC DNA-directed RNA polymerase subunit K OS=Su...    50   1e-05
sp|P29200|RPOK_HALMA DNA-directed RNA polymerase subunit K OS=Ha...    50   1e-05

>sp|O88828|RPAB2_RAT DNA-directed RNA polymerases I, II, and III
           subunit RPABC2 OS=Rattus norvegicus GN=Polr2f PE=1 SV=1
          Length = 127

 Score =  135 bits (341), Expect = 1e-31
 Identities = 71/96 (73%), Positives = 81/96 (84%), Gaps = 2/96 (2%)
 Frame = +3

Query: 138 GGEDVE-MKDGETP-TDKPRKTTRYMTKYERARVLGTRALQISMNAPVMVELEGETDPLE 311
           G E+VE +  GE P  ++ R TT YMTKYERARVLGTRALQI+M APVMVELEGETDPL 
Sbjct: 32  GQENVEILPSGERPQANQKRITTPYMTKYERARVLGTRALQIAMCAPVMVELEGETDPLL 91

Query: 312 IAMKELRARKIPFTMRRYLPDGSFEDWGVDKLIVED 419
           IAMKEL+ARKIP  +RRYLPDGS+EDWGVD+LI+ D
Sbjct: 92  IAMKELKARKIPIIIRRYLPDGSYEDWGVDELIISD 127


>sp|P61219|RPAB2_MOUSE DNA-directed RNA polymerases I, II, and III
           subunit RPABC2 OS=Mus musculus GN=Polr2f PE=2 SV=1
          Length = 127

 Score =  135 bits (341), Expect = 1e-31
 Identities = 71/96 (73%), Positives = 81/96 (84%), Gaps = 2/96 (2%)
 Frame = +3

Query: 138 GGEDVE-MKDGETP-TDKPRKTTRYMTKYERARVLGTRALQISMNAPVMVELEGETDPLE 311
           G E+VE +  GE P  ++ R TT YMTKYERARVLGTRALQI+M APVMVELEGETDPL 
Sbjct: 32  GQENVEILPSGERPQANQKRITTPYMTKYERARVLGTRALQIAMCAPVMVELEGETDPLL 91

Query: 312 IAMKELRARKIPFTMRRYLPDGSFEDWGVDKLIVED 419
           IAMKEL+ARKIP  +RRYLPDGS+EDWGVD+LI+ D
Sbjct: 92  IAMKELKARKIPIIIRRYLPDGSYEDWGVDELIISD 127


>sp|Q5R592|RPAB2_PONAB DNA-directed RNA polymerases I, II, and III
           subunit RPABC2 OS=Pongo abelii GN=POLR2F PE=2 SV=1
          Length = 127

 Score =  135 bits (340), Expect = 1e-31
 Identities = 71/96 (73%), Positives = 81/96 (84%), Gaps = 2/96 (2%)
 Frame = +3

Query: 138 GGEDVE-MKDGETP-TDKPRKTTRYMTKYERARVLGTRALQISMNAPVMVELEGETDPLE 311
           G E+VE +  GE P  ++ R TT YMTKYERARVLGTRALQI+M APVMVELEGETDPL 
Sbjct: 32  GQENVEILPSGERPQANQKRITTPYMTKYERARVLGTRALQIAMCAPVMVELEGETDPLL 91

Query: 312 IAMKELRARKIPFTMRRYLPDGSFEDWGVDKLIVED 419
           IAMKEL+ARKIP  +RRYLPDGS+EDWGVD+LI+ D
Sbjct: 92  IAMKELKARKIPIIIRRYLPDGSYEDWGVDELIITD 127


>sp|P61218|RPAB2_HUMAN DNA-directed RNA polymerases I, II, and III
           subunit RPABC2 OS=Homo sapiens GN=POLR2F PE=1 SV=1
          Length = 127

 Score =  135 bits (340), Expect = 1e-31
 Identities = 71/96 (73%), Positives = 81/96 (84%), Gaps = 2/96 (2%)
 Frame = +3

Query: 138 GGEDVE-MKDGETP-TDKPRKTTRYMTKYERARVLGTRALQISMNAPVMVELEGETDPLE 311
           G E+VE +  GE P  ++ R TT YMTKYERARVLGTRALQI+M APVMVELEGETDPL 
Sbjct: 32  GQENVEILPSGERPQANQKRITTPYMTKYERARVLGTRALQIAMCAPVMVELEGETDPLL 91

Query: 312 IAMKELRARKIPFTMRRYLPDGSFEDWGVDKLIVED 419
           IAMKEL+ARKIP  +RRYLPDGS+EDWGVD+LI+ D
Sbjct: 92  IAMKELKARKIPIIIRRYLPDGSYEDWGVDELIITD 127


>sp|P61217|RPAB2_CRIGR DNA-directed RNA polymerases I, II, and III
           subunit RPABC2 OS=Cricetulus griseus GN=POLR2F PE=2 SV=1
          Length = 127

 Score =  135 bits (340), Expect = 1e-31
 Identities = 71/96 (73%), Positives = 81/96 (84%), Gaps = 2/96 (2%)
 Frame = +3

Query: 138 GGEDVE-MKDGETP-TDKPRKTTRYMTKYERARVLGTRALQISMNAPVMVELEGETDPLE 311
           G E+VE +  GE P  ++ R TT YMTKYERARVLGTRALQI+M APVMVELEGETDPL 
Sbjct: 32  GQENVEILPSGERPQANQKRITTPYMTKYERARVLGTRALQIAMCAPVMVELEGETDPLL 91

Query: 312 IAMKELRARKIPFTMRRYLPDGSFEDWGVDKLIVED 419
           IAMKEL+ARKIP  +RRYLPDGS+EDWGVD+LI+ D
Sbjct: 92  IAMKELKARKIPIIIRRYLPDGSYEDWGVDELIITD 127


>sp|Q32PE0|RPAB2_BOVIN DNA-directed RNA polymerases I, II, and III
           subunit RPABC2 OS=Bos taurus GN=POLR2F PE=2 SV=1
          Length = 127

 Score =  132 bits (333), Expect = 9e-31
 Identities = 67/89 (75%), Positives = 76/89 (85%), Gaps = 1/89 (1%)
 Frame = +3

Query: 156 MKDGETP-TDKPRKTTRYMTKYERARVLGTRALQISMNAPVMVELEGETDPLEIAMKELR 332
           +  GE P  ++ R TT YMTKYERARVLGTRALQI+M APVMVELEGETDPL IAMKEL+
Sbjct: 39  LPSGERPQANQKRITTPYMTKYERARVLGTRALQIAMCAPVMVELEGETDPLLIAMKELK 98

Query: 333 ARKIPFTMRRYLPDGSFEDWGVDKLIVED 419
           ARKIP  +RRYLPDGS+EDWGVD+LI+ D
Sbjct: 99  ARKIPIIIRRYLPDGSYEDWGVDELIITD 127


>sp|P20435|RPAB2_YEAST DNA-directed RNA polymerases I, II, and III
           subunit RPABC2 OS=Saccharomyces cerevisiae GN=RPO26 PE=1
           SV=1
          Length = 155

 Score =  128 bits (321), Expect = 2e-29
 Identities = 63/87 (72%), Positives = 73/87 (83%)
 Frame = +3

Query: 156 MKDGETPTDKPRKTTRYMTKYERARVLGTRALQISMNAPVMVELEGETDPLEIAMKELRA 335
           +K+   P D+ R TT YMTKYERAR+LGTRALQISMNAPV V+LEGETDPL IAMKEL  
Sbjct: 69  LKEKAIPKDQ-RATTPYMTKYERARILGTRALQISMNAPVFVDLEGETDPLRIAMKELAE 127

Query: 336 RKIPFTMRRYLPDGSFEDWGVDKLIVE 416
           +KIP  +RRYLPDGSFEDW V++LIV+
Sbjct: 128 KKIPLVIRRYLPDGSFEDWSVEELIVD 154


>sp|Q54FA8|RPAB2_DICDI DNA-directed RNA polymerases I, II, and III
           subunit rpabc2 OS=Dictyostelium discoideum GN=polr2f
           PE=3 SV=1
          Length = 133

 Score =  125 bits (313), Expect = 2e-28
 Identities = 58/75 (77%), Positives = 69/75 (92%)
 Frame = +3

Query: 189 RKTTRYMTKYERARVLGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTMRRYL 368
           RKTTRYMTKYERAR+LG+RALQISMNAP+MVELEGETDPL+IA KELRA+KIP  +RR+L
Sbjct: 59  RKTTRYMTKYERARLLGSRALQISMNAPIMVELEGETDPLQIAWKELRAKKIPLIIRRFL 118

Query: 369 PDGSFEDWGVDKLIV 413
           P+G +EDW VD+L +
Sbjct: 119 PNGMYEDWSVDELSI 133


>sp|P36595|RPAB2_SCHPO DNA-directed RNA polymerases I, II, and III
           subunit RPABC2 OS=Schizosaccharomyces pombe GN=rpb6 PE=2
           SV=1
          Length = 142

 Score =  124 bits (312), Expect = 3e-28
 Identities = 64/100 (64%), Positives = 76/100 (76%), Gaps = 4/100 (4%)
 Frame = +3

Query: 123 PIDTLGGEDVEM----KDGETPTDKPRKTTRYMTKYERARVLGTRALQISMNAPVMVELE 290
           P  T+  EDV      + G+    + R TT YMTKYERAR+LGTRALQISMNAPV+V+LE
Sbjct: 43  PSTTVITEDVASSKTAQSGKAVAKEDRTTTPYMTKYERARILGTRALQISMNAPVLVDLE 102

Query: 291 GETDPLEIAMKELRARKIPFTMRRYLPDGSFEDWGVDKLI 410
           GETDPL+IAMKEL  +KIP  +RRYLPDGS+EDW V +LI
Sbjct: 103 GETDPLQIAMKELAQKKIPLLVRRYLPDGSYEDWSVAELI 142


>sp|Q24320|RPAB2_DROME DNA-directed RNA polymerases I, II, and III
           subunit RPABC2 OS=Drosophila melanogaster GN=RpII18 PE=1
           SV=1
          Length = 131

 Score =  123 bits (309), Expect = 6e-28
 Identities = 60/86 (69%), Positives = 73/86 (84%)
 Frame = +3

Query: 165 GETPTDKPRKTTRYMTKYERARVLGTRALQISMNAPVMVELEGETDPLEIAMKELRARKI 344
           G  P  K R TT+YMTKYERARVLGTRALQI+M AP+MVEL+GETDPL+IAMKEL+ +KI
Sbjct: 47  GGVPKSK-RITTKYMTKYERARVLGTRALQIAMCAPIMVELDGETDPLQIAMKELKQKKI 105

Query: 345 PFTMRRYLPDGSFEDWGVDKLIVEDS 422
           P  +RRYLPD S+EDW +D+LI+ D+
Sbjct: 106 PIIIRRYLPDHSYEDWSIDELIMVDN 131
tr_hit_id A9NU56
Definition tr|A9NU56|A9NU56_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 145
Score (bit) 206.0
E-value 7.0e-52
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK957294|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0027_P21, 5'
         (576 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NU56|A9NU56_PICSI Putative uncharacterized protein OS=Picea...   206   7e-52
tr|A2XIZ2|A2XIZ2_ORYSI Putative uncharacterized protein OS=Oryza...   181   3e-44
tr|Q8LI69|Q8LI69_ORYSJ Os07g0463100 protein OS=Oryza sativa subs...   179   1e-43
tr|A2YL15|A2YL15_ORYSI Putative uncharacterized protein OS=Oryza...   179   1e-43
tr|Q9FJ98|Q9FJ98_ARATH DNA-directed RNA polymerase II subunit-li...   179   1e-43
tr|B6TJG4|B6TJG4_MAIZE DNA-directed RNA polymerases I, II, and I...   178   2e-43
tr|B6SI57|B6SI57_MAIZE DNA-directed RNA polymerases I, II, and I...   178   2e-43
tr|B4FLZ6|B4FLZ6_MAIZE Putative uncharacterized protein OS=Zea m...   178   2e-43
tr|Q6F2V1|Q6F2V1_ORYSJ Os03g0586600 protein OS=Oryza sativa subs...   177   5e-43
tr|B6T8K1|B6T8K1_MAIZE DNA-directed RNA polymerases I, II, and I...   175   1e-42
tr|Q9S7Q6|Q9S7Q6_TOBAC DNA-directed RNA polymerase IIb (DNA-dire...   174   2e-42
tr|A2Q3E0|A2Q3E0_MEDTR DNA-directed RNA polymerase, 14 to 18 kDa...   173   5e-42
tr|A3BJH6|A3BJH6_ORYSJ Putative uncharacterized protein OS=Oryza...   172   9e-42
tr|B7FHE6|B7FHE6_MEDTR Putative uncharacterized protein OS=Medic...   172   2e-41
tr|A9TB02|A9TB02_PHYPA Predicted protein (Fragment) OS=Physcomit...   172   2e-41
tr|A7QVJ8|A7QVJ8_VITVI Chromosome chr16 scaffold_189, whole geno...   172   2e-41
tr|A7PJQ3|A7PJQ3_VITVI Chromosome chr12 scaffold_18, whole genom...   169   8e-41
tr|A5AKW7|A5AKW7_VITVI Putative uncharacterized protein OS=Vitis...   167   5e-40
tr|Q9SJ96|Q9SJ96_ARATH Putative DNA-directed RNA polymerase II s...   166   1e-39
tr|B7PRL4|B7PRL4_IXOSC RNA polymerase subunit K, putative OS=Ixo...   139   1e-31
tr|Q3TN04|Q3TN04_MOUSE Putative uncharacterized protein OS=Mus m...   135   2e-30
tr|Q6IAY3|Q6IAY3_HUMAN POLR2F protein (Polymerase (RNA) II (DNA ...   135   2e-30
tr|B2R4H6|B2R4H6_HUMAN cDNA, FLJ92093, highly similar to Homo sa...   135   2e-30
tr|B6MQG1|B6MQG1_BRAFL Putative uncharacterized protein OS=Branc...   133   6e-30
tr|Q9PT88|Q9PT88_CHICK RNA polymerase common subunit RPB6 OS=Gal...   132   1e-29
tr|Q6DGS5|Q6DGS5_DANRE Zgc:92790 OS=Danio rerio GN=zgc:92790 PE=...   132   1e-29
tr|B5G123|B5G123_TAEGU Putative DNA directed RNA polymerase II p...   132   1e-29
tr|B8C3F5|B8C3F5_THAPS Dna-directed RNA polymerase i (Fragment) ...   131   2e-29
tr|Q6DDA6|Q6DDA6_XENTR Polymerase (RNA) II (DNA directed) polype...   131   3e-29
tr|Q5U255|Q5U255_XENLA LOC495684 protein OS=Xenopus laevis GN=po...   131   3e-29

>tr|A9NU56|A9NU56_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 147

 Score =  206 bits (524), Expect = 7e-52
 Identities = 101/145 (69%), Positives = 115/145 (79%), Gaps = 2/145 (1%)
 Frame = +3

Query: 12  MADEDFNDFDGGDAGYXXXXXXXXXXXXXXXXXXQ--AAPIDTLGGEDVEMKDGETPTDK 185
           MADED+NDFDGGD GY                  +    P+DTLGG D E  + + P+DK
Sbjct: 1   MADEDYNDFDGGDVGYEEEPPEPEIEEEVAPEEEEHEEVPVDTLGGGDKEPVEQQRPSDK 60

Query: 186 PRKTTRYMTKYERARVLGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTMRRY 365
           PRKT+++MTKYERAR+LGTRALQISMNAPVMVELEGETDPLEIAMKELR RKIPFT+RRY
Sbjct: 61  PRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRY 120

Query: 366 LPDGSFEDWGVDKLIVEDSWKRQVG 440
           LPDGS+EDWGVD+LIVEDSW+RQVG
Sbjct: 121 LPDGSYEDWGVDELIVEDSWRRQVG 145


>tr|A2XIZ2|A2XIZ2_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_12404 PE=4 SV=1
          Length = 143

 Score =  181 bits (458), Expect = 3e-44
 Identities = 95/145 (65%), Positives = 108/145 (74%)
 Frame = +3

Query: 12  MADEDFNDFDGGDAGYXXXXXXXXXXXXXXXXXXQAAPIDTLGGEDVEMKDGETPTDKPR 191
           MAD+D+ND D G                      +  P + +G E  E K+ E  T +PR
Sbjct: 1   MADDDYNDMDMGYEDEPPEPEIEEGAEEEPENNNEDGPDEVVGAE-AEDKEQEK-TQRPR 58

Query: 192 KTTRYMTKYERARVLGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTMRRYLP 371
           KT++YMTKYERAR+LGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFT+RRYLP
Sbjct: 59  KTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLP 118

Query: 372 DGSFEDWGVDKLIVEDSWKRQVG*G 446
           DGS+EDWGVD+LIVEDSWKRQVG G
Sbjct: 119 DGSYEDWGVDELIVEDSWKRQVGGG 143


>tr|Q8LI69|Q8LI69_ORYSJ Os07g0463100 protein OS=Oryza sativa subsp.
           japonica GN=OJ1634_H04.114 PE=2 SV=1
          Length = 142

 Score =  179 bits (454), Expect = 1e-43
 Identities = 93/145 (64%), Positives = 108/145 (74%)
 Frame = +3

Query: 12  MADEDFNDFDGGDAGYXXXXXXXXXXXXXXXXXXQAAPIDTLGGEDVEMKDGETPTDKPR 191
           MA++D+ND D G                      + A  D +G ED + ++    T +PR
Sbjct: 1   MAEDDYNDMDMGYEDEPPEPEIEEGAEEEPENNNEDAVDDVVGAEDDKEQE---KTARPR 57

Query: 192 KTTRYMTKYERARVLGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTMRRYLP 371
           KT++YMTKYERAR+LGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFT+RRYLP
Sbjct: 58  KTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLP 117

Query: 372 DGSFEDWGVDKLIVEDSWKRQVG*G 446
           DGS+EDWGVD+LIVEDSWKRQVG G
Sbjct: 118 DGSYEDWGVDELIVEDSWKRQVGGG 142


>tr|A2YL15|A2YL15_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_25904 PE=4 SV=1
          Length = 142

 Score =  179 bits (454), Expect = 1e-43
 Identities = 93/145 (64%), Positives = 108/145 (74%)
 Frame = +3

Query: 12  MADEDFNDFDGGDAGYXXXXXXXXXXXXXXXXXXQAAPIDTLGGEDVEMKDGETPTDKPR 191
           MA++D+ND D G                      + A  D +G ED + ++    T +PR
Sbjct: 1   MAEDDYNDMDMGYEDEPPEPEIEEGAEEEPENNNEDAVDDVVGAEDDKEQE---KTARPR 57

Query: 192 KTTRYMTKYERARVLGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTMRRYLP 371
           KT++YMTKYERAR+LGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFT+RRYLP
Sbjct: 58  KTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLP 117

Query: 372 DGSFEDWGVDKLIVEDSWKRQVG*G 446
           DGS+EDWGVD+LIVEDSWKRQVG G
Sbjct: 118 DGSYEDWGVDELIVEDSWKRQVGGG 142


>tr|Q9FJ98|Q9FJ98_ARATH DNA-directed RNA polymerase II subunit-like
           protein OS=Arabidopsis thaliana GN=At5g51940 PE=2 SV=1
          Length = 144

 Score =  179 bits (453), Expect = 1e-43
 Identities = 96/145 (66%), Positives = 109/145 (75%), Gaps = 2/145 (1%)
 Frame = +3

Query: 12  MADEDFNDFDGGDAGYXXXXXXXXXXXXXXXXXXQAAPIDTLGGEDVEMKDG-ET-PTDK 185
           MADED+ND D  D GY                  +    D + GE +E +D  ET P  +
Sbjct: 1   MADEDYNDVD--DLGYEDEPAEPEIEEGVEEDV-EMKENDDVNGEPIEAEDKVETEPVQR 57

Query: 186 PRKTTRYMTKYERARVLGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTMRRY 365
           PRKT+++MTKYERAR+LGTRALQISMNAPVMVELEGETDPLEIAMKELR RKIPFT+RRY
Sbjct: 58  PRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRQRKIPFTIRRY 117

Query: 366 LPDGSFEDWGVDKLIVEDSWKRQVG 440
           LPDGSFE+WGVD+LIVEDSWKRQVG
Sbjct: 118 LPDGSFEEWGVDELIVEDSWKRQVG 142


>tr|B6TJG4|B6TJG4_MAIZE DNA-directed RNA polymerases I, II, and III
           14.4 kDa polypeptide OS=Zea mays PE=2 SV=1
          Length = 142

 Score =  178 bits (451), Expect = 2e-43
 Identities = 93/143 (65%), Positives = 107/143 (74%)
 Frame = +3

Query: 12  MADEDFNDFDGGDAGYXXXXXXXXXXXXXXXXXXQAAPIDTLGGEDVEMKDGETPTDKPR 191
           MAD+D+N+ D G                      + AP D +GGE  + +  +  T + R
Sbjct: 1   MADDDYNEIDMGYED-ELPEPEIEEGAEEELENNEDAPDDVIGGEGEDKE--QEKTKRER 57

Query: 192 KTTRYMTKYERARVLGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTMRRYLP 371
           KTT+YMTKYERAR+LGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFT+RRYLP
Sbjct: 58  KTTKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLP 117

Query: 372 DGSFEDWGVDKLIVEDSWKRQVG 440
           DGS+EDWGVD+LIVEDSWKRQVG
Sbjct: 118 DGSYEDWGVDELIVEDSWKRQVG 140


>tr|B6SI57|B6SI57_MAIZE DNA-directed RNA polymerases I, II, and III
           14.4 kDa polypeptide OS=Zea mays PE=2 SV=1
          Length = 142

 Score =  178 bits (451), Expect = 2e-43
 Identities = 93/143 (65%), Positives = 107/143 (74%)
 Frame = +3

Query: 12  MADEDFNDFDGGDAGYXXXXXXXXXXXXXXXXXXQAAPIDTLGGEDVEMKDGETPTDKPR 191
           MAD+D+N+ D G                      + AP D +GGE  + +  +  T + R
Sbjct: 1   MADDDYNEIDMGYED-EPPEPEIEEGAEEEPENNEDAPDDVIGGEGEDKE--QEKTKRER 57

Query: 192 KTTRYMTKYERARVLGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTMRRYLP 371
           KTT+YMTKYERAR+LGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFT+RRYLP
Sbjct: 58  KTTKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLP 117

Query: 372 DGSFEDWGVDKLIVEDSWKRQVG 440
           DGS+EDWGVD+LIVEDSWKRQVG
Sbjct: 118 DGSYEDWGVDELIVEDSWKRQVG 140


>tr|B4FLZ6|B4FLZ6_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 142

 Score =  178 bits (451), Expect = 2e-43
 Identities = 93/143 (65%), Positives = 107/143 (74%)
 Frame = +3

Query: 12  MADEDFNDFDGGDAGYXXXXXXXXXXXXXXXXXXQAAPIDTLGGEDVEMKDGETPTDKPR 191
           MAD+D+N+ D G                      + AP D +GGE  + +  +  T + R
Sbjct: 1   MADDDYNEIDMGYED-EPPEPEIEEGAEEELENNEDAPDDVIGGEGEDKE--QEKTKRER 57

Query: 192 KTTRYMTKYERARVLGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTMRRYLP 371
           KTT+YMTKYERAR+LGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFT+RRYLP
Sbjct: 58  KTTKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLP 117

Query: 372 DGSFEDWGVDKLIVEDSWKRQVG 440
           DGS+EDWGVD+LIVEDSWKRQVG
Sbjct: 118 DGSYEDWGVDELIVEDSWKRQVG 140


>tr|Q6F2V1|Q6F2V1_ORYSJ Os03g0586600 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBa0010D22.24 PE=2 SV=1
          Length = 142

 Score =  177 bits (448), Expect = 5e-43
 Identities = 94/145 (64%), Positives = 106/145 (73%)
 Frame = +3

Query: 12  MADEDFNDFDGGDAGYXXXXXXXXXXXXXXXXXXQAAPIDTLGGEDVEMKDGETPTDKPR 191
           MAD+D+ND D G                           D + G + E K+ E  T +PR
Sbjct: 1   MADDDYNDMDMGYEDEPPEPEIEEGAEEEPENNEDGP--DEVVGAEAEDKEQEK-TQRPR 57

Query: 192 KTTRYMTKYERARVLGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTMRRYLP 371
           KT++YMTKYERAR+LGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFT+RRYLP
Sbjct: 58  KTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLP 117

Query: 372 DGSFEDWGVDKLIVEDSWKRQVG*G 446
           DGS+EDWGVD+LIVEDSWKRQVG G
Sbjct: 118 DGSYEDWGVDELIVEDSWKRQVGGG 142


>tr|B6T8K1|B6T8K1_MAIZE DNA-directed RNA polymerases I, II, and III
           14.4 kDa polypeptide OS=Zea mays PE=2 SV=1
          Length = 142

 Score =  175 bits (444), Expect = 1e-42
 Identities = 92/143 (64%), Positives = 106/143 (74%)
 Frame = +3

Query: 12  MADEDFNDFDGGDAGYXXXXXXXXXXXXXXXXXXQAAPIDTLGGEDVEMKDGETPTDKPR 191
           MA +D+N+ D G                      + AP D +GGE  + +  +  T + R
Sbjct: 1   MAXDDYNEIDMGYED-EPPEPEIEEGAEEEPENNEDAPDDVIGGEGEDKE--QEKTKRER 57

Query: 192 KTTRYMTKYERARVLGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTMRRYLP 371
           KTT+YMTKYERAR+LGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFT+RRYLP
Sbjct: 58  KTTKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRARKIPFTIRRYLP 117

Query: 372 DGSFEDWGVDKLIVEDSWKRQVG 440
           DGS+EDWGVD+LIVEDSWKRQVG
Sbjct: 118 DGSYEDWGVDELIVEDSWKRQVG 140