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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK957299
Clone id TST39A01NGRL0028_A02
Library
Length 678
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0028_A02. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GAGAAGGAGAGGGGGCCCGAGAGGGAGAAGCTCGTGTTTGTTTGCAGAAATGGCTGCCAT
GCAGGCGACATTGGGCGTTTCCTGCCCTTCTTCGTCTCTATGCAAGTCGTCTTTCTTGGG
GAGCGCCTCTCGTCTTTCTCGGGTGGCCTCTGCTATTGCCCCTTCCCCTGTCCGTGCCTT
CAAGGTCGAGGCAAAGAAAGGCAATGGCTTCCCGGTCTGGCATCCCCTGCTTACCTAGAC
GGAAACCTTGCTGGTGACAATGGCTTCGACCCCCTTGGCTTGGCTGAGGATCCTGCCAAC
CTTAAATGGTATGTGCAAGCAGAGCTTCAAAATGGAAGATGGGCAATGCTTGGAGTAGCT
GGCATGTTGATCCCCGACCTCTTGACAAAGATTGGTATCATCAATGTTCCTGCATGGTAT
GATGCGGGCAAGGTCGAGTACTTCGCCCCCGCCTCCACTCTCTTTGTGATCGAATTCATC
TTGTTCCACTATGTGGAGGTGAGAAGATGGCAAGACATCAAGTACCCTGGCAGTGTGAAT
GCCGATCCGTTCAACCCTAAGCTTACTCTGCCCCCTGGCGAGGTTGGATACCCTGGAGGC
ATCTTCAACCCCTTCAATTTCCCTACTTCTCTGGAATACAAGGAGAAGGAGATTGCAAAT
GGGCCGGCTTGCTATGCT
■■Homology search results ■■ -
sp_hit_id P27521
Definition sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana
Align length 157
Score (bit) 262.0
E-value 9.0e-70
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK957299|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0028_A02, 5'
         (678 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4, chloropl...   262   9e-70
sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4, chloropla...   260   4e-69
sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20, chl...   201   2e-51
sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplas...   174   3e-43
sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7, chloropl...   174   4e-43
sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8, chloropl...   107   8e-23
sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplas...   103   8e-22
sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24, chloro...    99   3e-20
sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A, c...    96   1e-19
sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B, c...    91   4e-18
sp|P12360|CB11_SOLLC Chlorophyll a-b binding protein 6A, chlorop...    91   7e-18
sp|Q9SDM1|CB121_HORVU Chlorophyll a-b binding protein 1B-21, chl...    87   6e-17
sp|Q9XF89|CB26_ARATH Chlorophyll a-b binding protein CP26, chlor...    76   2e-13
sp|P14273|CB2_CHLRE Chlorophyll a-b binding protein of LHCII typ...    70   1e-11
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...    70   1e-11
sp|P27517|CB2_DUNTE Chlorophyll a-b binding protein of LHCII typ...    69   2e-11
sp|P08976|LH18_EUGGR Light-harvesting complex I LH38 proteins (F...    69   3e-11
sp|P22686|CB2_CHLMO Chlorophyll a-b binding protein of LHCII typ...    68   4e-11
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas...    66   2e-10
sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas...    66   2e-10
sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2, chloropl...    65   3e-10
sp|P04777|CB21_ARATH Chlorophyll a-b binding protein 165/180, ch...    65   3e-10
sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl...    65   4e-10
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb...    64   1e-09
sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplas...    64   1e-09
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...    64   1e-09
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...    64   1e-09
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop...    64   1e-09
sp|P27523|CB23_HORVU Chlorophyll a-b binding protein of LHCII ty...    63   1e-09
sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1, chloropl...    63   1e-09

>sp|P27521|CB24_ARATH Chlorophyll a-b binding protein 4,
           chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1
          Length = 251

 Score =  262 bits (669), Expect(2) = 9e-70
 Identities = 122/157 (77%), Positives = 136/157 (86%)
 Frame = +1

Query: 193 KERQWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLI 372
           K+ +WLPGLASP YL G+LAGDNGFDPLGLAEDP NLKW+VQAEL NGRWAMLGVAGML+
Sbjct: 53  KKGEWLPGLASPDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLL 112

Query: 373 PDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYPGSVNADPF 552
           P++ TKIGIINVP WYDAGK +YFA +STLFVIEFILFHYVE+RRWQDIK PGSVN DP 
Sbjct: 113 PEVFTKIGIINVPEWYDAGKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPI 172

Query: 553 NPKLTLPPGEVGYPGGIFNPFNFPTSLEYKEKEIANG 663
             + +LP GEVGYPGGIFNP NF  + E KEKE+ANG
Sbjct: 173 FKQYSLPKGEVGYPGGIFNPLNFAPTQEAKEKELANG 209



 Score = 22.3 bits (46), Expect(2) = 9e-70
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +2

Query: 176 AFKVEAKKGNGFP 214
           +FKVEAKKG   P
Sbjct: 47  SFKVEAKKGEWLP 59


>sp|Q9SQL2|CB24_PEA Chlorophyll a-b binding protein P4,
           chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1
          Length = 252

 Score =  260 bits (665), Expect = 4e-69
 Identities = 126/187 (67%), Positives = 143/187 (76%), Gaps = 3/187 (1%)
 Frame = +1

Query: 112 FLGERLSSFSGGLCYCPFPCP---CLQGRGKERQWLPGLASPAYLDGNLAGDNGFDPLGL 282
           FLG      + G+ + P  C      +   K+ +WLPGLASP YL G+L GDNGFDPLGL
Sbjct: 22  FLGGSSGKLNRGVAFRPVGCSPSASFKVEAKKGEWLPGLASPGYLTGSLPGDNGFDPLGL 81

Query: 283 AEDPANLKWYVQAELQNGRWAMLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTL 462
           AEDP NL+W+VQAEL NGRWAMLGVAGML+P++ T IGIINVP WY AGK EYFA +STL
Sbjct: 82  AEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGIINVPKWYAAGKEEYFASSSTL 141

Query: 463 FVIEFILFHYVEVRRWQDIKYPGSVNADPFNPKLTLPPGEVGYPGGIFNPFNFPTSLEYK 642
           FVIEFIL HYVE+RRWQDIK PGSVN DP   + +LP GEVGYPGGIFNP NF  +LE K
Sbjct: 142 FVIEFILSHYVEIRRWQDIKNPGSVNQDPIFKQYSLPAGEVGYPGGIFNPLNFAPTLEAK 201

Query: 643 EKEIANG 663
           EKEIANG
Sbjct: 202 EKEIANG 208


>sp|Q36718|CB120_HORVU Chlorophyll a-b binding protein 1B-20,
           chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20
           PE=1 SV=1
          Length = 231

 Score =  201 bits (512), Expect = 2e-51
 Identities = 99/154 (64%), Positives = 116/154 (75%), Gaps = 1/154 (0%)
 Frame = +1

Query: 205 WLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLIPDLL 384
           WLPGL SPAYLDG+L GDNGFDPL LAEDP +L+W+VQA++ NGRWAMLGVAGMLIP++L
Sbjct: 36  WLPGLQSPAYLDGSLEGDNGFDPLALAEDPEDLRWFVQADVVNGRWAMLGVAGMLIPEVL 95

Query: 385 TKIGIINVPAWYD-AGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYPGSVNADPFNPK 561
           TK G++N P W    GK  YFA +ST   +  +   YVE+RRWQDIK PGSVN DP    
Sbjct: 96  TKAGLMNAPEWLRLPGKETYFASSSTALRVH-MSSTYVEIRRWQDIKNPGSVNQDPIFKS 154

Query: 562 LTLPPGEVGYPGGIFNPFNFPTSLEYKEKEIANG 663
            +LPP E GYPG +FNP NF   LE KEKE+ANG
Sbjct: 155 YSLPPHECGYPGRVFNPLNF-APLENKEKELANG 187


>sp|P13869|CB12_PETHY Chlorophyll a-b binding protein, chloroplastic
           OS=Petunia hybrida PE=2 SV=1
          Length = 270

 Score =  174 bits (442), Expect = 3e-43
 Identities = 86/159 (54%), Positives = 105/159 (66%), Gaps = 6/159 (3%)
 Frame = +1

Query: 205 WLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLIPDLL 384
           W PG   P +LDG+L GD GFDPLGL  DP +LKW  QAEL + RWAMLG AG+ IP+ L
Sbjct: 68  WFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFL 127

Query: 385 TKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYPGSVNADPFNPKL 564
           TKIG++N P+WY AG+ EYF   +TLFVIE +L  + E RRW DI  PG VN DP  P  
Sbjct: 128 TKIGVLNTPSWYTAGEQEYFTDTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNN 187

Query: 565 TLPPGEVGYPGGI-FNPFNF----PTSL-EYKEKEIANG 663
            L   +VGYPGG+ F+P  +    P  + E + KEI NG
Sbjct: 188 KLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNG 226



 Score = 33.9 bits (76), Expect = 0.82
 Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +1

Query: 238 DGNLAGDNGFDPLGLAE-DPANLKWYVQAELQNGRWAMLGVAGMLIPDLLTKIGIIN 405
           D    G   FDPLG     PA +K     E++NGR AML V G     + T  G I+
Sbjct: 193 DVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPID 249


>sp|P10708|CB12_SOLLC Chlorophyll a-b binding protein 7,
           chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1
          Length = 270

 Score =  174 bits (441), Expect = 4e-43
 Identities = 86/159 (54%), Positives = 107/159 (67%), Gaps = 6/159 (3%)
 Frame = +1

Query: 205 WLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLIPDLL 384
           W PG   P +LDG+L GD GFDPLGLA DP +L+W  QAEL + RWAMLG AG+ IP+LL
Sbjct: 68  WFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELL 127

Query: 385 TKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYPGSVNADPFNPKL 564
           TKIGI+N P+WY AG+ EYF   +TLF++E +L  + E RRW DI  PG VN DP  P  
Sbjct: 128 TKIGILNTPSWYTAGEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKPGCVNTDPIFPNN 187

Query: 565 TLPPGEVGYPGGI-FNPFNF----PTSL-EYKEKEIANG 663
            L   +VGYPGG+ F+P  +    P  + E + KEI NG
Sbjct: 188 KLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNG 226



 Score = 33.9 bits (76), Expect = 0.82
 Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +1

Query: 238 DGNLAGDNGFDPLGLAE-DPANLKWYVQAELQNGRWAMLGVAGMLIPDLLTKIGIIN 405
           D    G   FDPLG     PA +K     E++NGR AML V G     + T  G I+
Sbjct: 193 DVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPID 249


>sp|P27522|CB13_SOLLC Chlorophyll a-b binding protein 8,
           chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1
          Length = 273

 Score =  107 bits (266), Expect = 8e-23
 Identities = 76/182 (41%), Positives = 94/182 (51%), Gaps = 23/182 (12%)
 Frame = +1

Query: 187 RGKERQ-WLPGLASPAYLDGNLAGDNGFDPLGLAEDPANL------KWYVQAELQNGRWA 345
           +G  RQ W     S +YLDG L GD GFDPLGL+ DP         KW    E+ NGR+A
Sbjct: 49  QGANRQLWFASKQSLSYLDGRLPGDFGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRFA 107

Query: 346 MLGVAGMLIPDLLTKIGII---NVPAWYD------AGKVEYFAPASTLFVIEFILFHYVE 498
           MLG AG + P++L K G+I      AW+       AG   Y+A   TLFV+E  L  + E
Sbjct: 108 MLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAE 167

Query: 499 VRRWQDIKYPGSVNADPF--NPKLTLPPGEVGYPGG-IFNPFNF----PTSLEYKEKEIA 657
            RR+QD   PGS+    F    K     G+  YPGG +FNP  F     +  E K KEI 
Sbjct: 168 HRRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIK 227

Query: 658 NG 663
           NG
Sbjct: 228 NG 229



 Score = 43.5 bits (101), Expect = 0.001
 Identities = 25/63 (39%), Positives = 34/63 (53%)
 Frame = +1

Query: 208 LPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLIPDLLT 387
           L G   PAY  G L     F+PLG  +D  ++K     E++NGR AML + G  I  L+T
Sbjct: 192 LGGSGDPAYPGGPL-----FNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQALVT 246

Query: 388 KIG 396
            +G
Sbjct: 247 GVG 249


>sp|Q32904|CB23_PEA Chlorophyll a-b binding protein 3, chloroplastic
           OS=Pisum sativum GN=lhca3 PE=1 SV=1
          Length = 275

 Score =  103 bits (257), Expect = 8e-22
 Identities = 75/189 (39%), Positives = 93/189 (49%), Gaps = 25/189 (13%)
 Frame = +1

Query: 172 PCLQGRGKERQWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANL------KWYVQAELQN 333
           P  QG      W     S +YLDG+L GD GFDPLGL+ DP         +W    E+ N
Sbjct: 47  PVKQGGVDRPLWFASKQSLSYLDGSLPGDYGFDPLGLS-DPEGTGGFIEPRWLAYGEVIN 105

Query: 334 GRWAMLGVAGMLIPDLLTKIGII---NVPAWYD------AGKVEYFAPASTLFVIEFILF 486
           GR+AMLG  G + P+ L K+G+I      AW+       AG   Y+A   TLFV+E  L 
Sbjct: 106 GRFAMLGAVGAIAPEYLGKVGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALM 165

Query: 487 HYVEVRRWQDIKYPGSVNADPFNPKLTLPPGEVG-----YPGG-IFNPFNF----PTSLE 636
            + E RR+QD   PGS+    F   L L  G  G     YPGG  FNP  F     +  E
Sbjct: 166 GFAEHRRFQDWAKPGSMGKQYF---LGLEKGFGGSGNPAYPGGPFFNPLGFGKDEKSLKE 222

Query: 637 YKEKEIANG 663
            K KE+ NG
Sbjct: 223 LKLKEVKNG 231



 Score = 42.4 bits (98), Expect = 0.002
 Identities = 24/61 (39%), Positives = 33/61 (54%)
 Frame = +1

Query: 214 GLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLIPDLLTKI 393
           G  +PAY  G       F+PLG  +D  +LK     E++NGR AML + G  I  L+T +
Sbjct: 196 GSGNPAYPGGPF-----FNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGV 250

Query: 394 G 396
           G
Sbjct: 251 G 251


>sp|P36494|CB4_SPIOL Chlorophyll a-b binding protein CP24,
           chloroplastic OS=Spinacia oleracea PE=2 SV=1
          Length = 261

 Score = 98.6 bits (244), Expect = 3e-20
 Identities = 61/149 (40%), Positives = 80/149 (53%), Gaps = 12/149 (8%)
 Frame = +1

Query: 196 ERQWLPGLAS------PAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGV 357
           ++ W+P +        P +LDG+L GD GFDPLGL +DPA LKWY +AEL +GRWAML V
Sbjct: 57  KKSWIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMLAV 116

Query: 358 AGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYPGSV 537
            G+ +    T  GI    A  D G V  F+   TL   + +L  +VE +RW D   P S 
Sbjct: 117 LGIFVGQAWT--GIPWFEAGADPGAVAPFS-FGTLLGTQLLLMGWVESKRWVDFFDPDSQ 173

Query: 538 NADPFNP------KLTLPPGEVGYPGGIF 606
           + +   P        +   GE GYPGG F
Sbjct: 174 SVEWATPWSRTAENFSNSTGEQGYPGGKF 202


>sp|P27524|CB4A_SOLLC Chlorophyll a-b binding protein CP24 10A,
           chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3
           SV=1
          Length = 256

 Score = 96.3 bits (238), Expect = 1e-19
 Identities = 61/152 (40%), Positives = 79/152 (51%), Gaps = 15/152 (9%)
 Frame = +1

Query: 196 ERQWLPG------LASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGV 357
           ++ W+P       L  P +LDG+L GD GFDPLGL +DPA LKWY +AEL +GRWAM  V
Sbjct: 52  KKSWIPAVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 111

Query: 358 AGMLIPDLLTKIGIINVPAWYDAG-KVEYFAPAS--TLFVIEFILFHYVEVRRWQDIKYP 528
            G+ +    + I       W++AG      AP S  TL   + IL  +VE +RW D   P
Sbjct: 112 LGIFVGQAWSGI------PWFEAGADPGAIAPFSFGTLLGTQLILMGWVESKRWVDFFDP 165

Query: 529 GSVNADPFNP------KLTLPPGEVGYPGGIF 606
            S + +   P            GE GYPGG F
Sbjct: 166 DSQSVEWATPWSKTAENFANFTGEQGYPGGKF 197


>sp|P27525|CB4B_SOLLC Chlorophyll a-b binding protein CP24 10B,
           chloroplastic OS=Solanum lycopersicum GN=CAP10B PE=3
           SV=1
          Length = 256

 Score = 91.3 bits (225), Expect = 4e-18
 Identities = 59/152 (38%), Positives = 79/152 (51%), Gaps = 15/152 (9%)
 Frame = +1

Query: 196 ERQWLPGLAS------PAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGV 357
           ++ W+P + S      P +LDG+L GD GFDPLGL +DPA LKWY +AEL +GRWAM  V
Sbjct: 52  KKSWIPAVKSGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV 111

Query: 358 AGMLIPDLLTKIGIINVPAWYDAG-KVEYFAPAS--TLFVIEFILFHYVEVRRWQDIKYP 528
            G+ +    + I       W++AG      AP S  +L   + +L  +VE +RW D    
Sbjct: 112 LGIFVGQAWSGI------PWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFDN 165

Query: 529 GSVNADPFNP------KLTLPPGEVGYPGGIF 606
            S + D   P            GE GYPGG F
Sbjct: 166 DSQSIDWATPWSKTAENFANFTGEQGYPGGKF 197
tr_hit_id Q07489
Definition tr|Q07489|Q07489_PINSY Lhca4 protein,Type 4 protein of light-harvesting complex of photosystem I OS=Pinus sylvestris
Align length 154
Score (bit) 268.0
E-value 7.0e-72
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK957299|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0028_A02, 5'
         (678 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q07489|Q07489_PINSY Lhca4 protein,Type 4 protein of light-har...   268   7e-72
tr|Q41039|Q41039_PINSY Lhca4 protein,Type 4 protein of light-har...   268   2e-71
tr|A5AEI0|A5AEI0_VITVI Putative uncharacterized protein (Chromos...   262   1e-69
tr|A9NUC5|A9NUC5_PICSI Putative uncharacterized protein OS=Picea...   265   3e-69
tr|B1PDK1|B1PDK1_CAPAN Chloroplast chlorophyll a/b binding prote...   262   3e-69
tr|B7FJY9|B7FJY9_MEDTR Putative uncharacterized protein OS=Medic...   264   4e-69
tr|Q8RVI8|Q8RVI8_PINPS Putative chlorophyll a/b-binding protein ...   262   1e-68
tr|Q7XAC6|Q7XAC6_BETVU Chlorophyll a /b binding protein OS=Beta ...   262   1e-68
tr|Q7M1K8|Q7M1K8_SOLLC Chlorophyll a/b-binding protein (cab-12) ...   261   2e-68
tr|Q1H8L9|Q1H8L9_SOLTU Chlorophyll a/b binding protein OS=Solanu...   258   6e-68
tr|A9PIX4|A9PIX4_POPJC Putative uncharacterized protein OS=Popul...   259   1e-67
tr|Q7M1K9|Q7M1K9_SOLLC Chlorophyll a/b-binding protein (cab-11) ...   257   2e-67
tr|B6SZR1|B6SZR1_MAIZE Chlorophyll a-b binding protein 4 OS=Zea ...   258   2e-67
tr|B4FV94|B4FV94_MAIZE Chlorophyll a-b binding protein 4 OS=Zea ...   257   4e-67
tr|B6TNZ8|B6TNZ8_MAIZE Chlorophyll a-b binding protein 4 OS=Zea ...   255   2e-66
tr|B6TFT2|B6TFT2_MAIZE Chlorophyll a-b binding protein 4 OS=Zea ...   254   5e-66
tr|Q40481|Q40481_TOBAC Light-harvesting chlorophyll a /b binding...   253   1e-65
tr|B8LS59|B8LS59_BAMOL Photosystem I light-harvesting complex ty...   252   2e-65
tr|Q9LKC7|Q9LKC7_HORVU Chlorophyll a/b-binding protein (Fragment...   251   4e-65
tr|Q6YWJ7|Q6YWJ7_ORYSJ Os08g0435900 protein OS=Oryza sativa subs...   249   1e-64
tr|A2YVJ1|A2YVJ1_ORYSI Putative uncharacterized protein OS=Oryza...   249   1e-64
tr|A2YVI8|A2YVI8_ORYSI Putative uncharacterized protein OS=Oryza...   246   1e-63
tr|Q9ZSU1|Q9ZSU1_ORYSA Chlorophyll a/b-binding protein presursor...   243   8e-63
tr|Q6SYB3|Q6SYB3_ORYSJ Chlorophyll a/b binding protein presusor ...   239   9e-62
tr|B6DYZ9|B6DYZ9_LIQST Chloroplast chlorophyll a-b binding prote...   229   2e-58
tr|B6DZ35|B6DZ35_9MAGN Chloroplast chlorophyll a-b binding prote...   228   4e-58
tr|B6DZ24|B6DZ24_9MAGN Chloroplast chlorophyll a-b binding prote...   227   5e-58
tr|B6DZ20|B6DZ20_9MAGN Chloroplast chlorophyll a-b binding prote...   227   5e-58
tr|B6DZ12|B6DZ12_9MAGN Chloroplast chlorophyll a-b binding prote...   227   5e-58
tr|B6DYZ6|B6DYZ6_LIQFO Chloroplast chlorophyll a-b binding prote...   227   5e-58

>tr|Q07489|Q07489_PINSY Lhca4 protein,Type 4 protein of
           light-harvesting complex of photosystem I OS=Pinus
           sylvestris GN=Lhca4*1-1 PE=2 SV=1
          Length = 251

 Score =  268 bits (685), Expect(2) = 7e-72
 Identities = 123/154 (79%), Positives = 138/154 (89%)
 Frame = +1

Query: 202 QWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLIPDL 381
           +WLPGL+SP+YL+G+L GDNGFDPLGLAEDP +LKWYVQAEL NGRWAMLGVAGMLIP++
Sbjct: 54  EWLPGLSSPSYLNGSLPGDNGFDPLGLAEDPESLKWYVQAELVNGRWAMLGVAGMLIPEV 113

Query: 382 LTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYPGSVNADPFNPK 561
           LT IG+INVP WYDAGKVEYFA +STLFVIEFILFHYVE+RRWQDIKYPGSVN DP   +
Sbjct: 114 LTSIGLINVPKWYDAGKVEYFASSSTLFVIEFILFHYVELRRWQDIKYPGSVNQDPLFKQ 173

Query: 562 LTLPPGEVGYPGGIFNPFNFPTSLEYKEKEIANG 663
            +LPP EVGYPGGIFNP NF  S+E KEKE+ANG
Sbjct: 174 YSLPPNEVGYPGGIFNPLNFSPSMEAKEKELANG 207



 Score = 26.6 bits (57), Expect(2) = 7e-72
 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
 Frame = +2

Query: 62  QATLGVXXXXXXXXXXXXXXXXXRLSR-VASAIAPSPVRAFKVEAK 196
           QA LGV                 RL+R V     P+P R+FKVEAK
Sbjct: 7   QAALGVSCPSVCRSAFLTGSSVSRLARRVRPGSNPAPARSFKVEAK 52


>tr|Q41039|Q41039_PINSY Lhca4 protein,Type 4 protein of
           light-harvesting complex of photosystem I (Fragment)
           OS=Pinus sylvestris GN=Lhca4*1-2 PE=2 SV=1
          Length = 244

 Score =  268 bits (685), Expect(2) = 2e-71
 Identities = 123/154 (79%), Positives = 138/154 (89%)
 Frame = +1

Query: 202 QWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLIPDL 381
           +WLPGL+SP+YL+G+L GDNGFDPLGLAEDP +LKWYVQAEL NGRWAMLGVAGMLIP++
Sbjct: 47  EWLPGLSSPSYLNGSLPGDNGFDPLGLAEDPESLKWYVQAELVNGRWAMLGVAGMLIPEV 106

Query: 382 LTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYPGSVNADPFNPK 561
           LT IG+INVP WYDAGKVEYFA +STLFVIEFILFHYVE+RRWQDIKYPGSVN DP   +
Sbjct: 107 LTSIGLINVPKWYDAGKVEYFASSSTLFVIEFILFHYVELRRWQDIKYPGSVNQDPLFKQ 166

Query: 562 LTLPPGEVGYPGGIFNPFNFPTSLEYKEKEIANG 663
            +LPP EVGYPGGIFNP NF  S+E KEKE+ANG
Sbjct: 167 YSLPPNEVGYPGGIFNPLNFSPSMEAKEKELANG 200



 Score = 25.0 bits (53), Expect(2) = 2e-71
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +2

Query: 140 RVASAIAPSPVRAFKVEAK 196
           RV     P+P R+FKVEAK
Sbjct: 27  RVRPGSNPAPARSFKVEAK 45


>tr|A5AEI0|A5AEI0_VITVI Putative uncharacterized protein (Chromosome
           chr17 scaffold_12, whole genome shotgun sequence)
           OS=Vitis vinifera GN=GSVIVT00016319001 PE=4 SV=1
          Length = 252

 Score =  262 bits (670), Expect(2) = 1e-69
 Identities = 121/157 (77%), Positives = 134/157 (85%)
 Frame = +1

Query: 193 KERQWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLI 372
           K+ +WLPGL+SP+YLDG+L GDNGFDPLGLAEDP NLKWYVQAEL N RWAMLGVAGML+
Sbjct: 52  KKGEWLPGLSSPSYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVAGMLL 111

Query: 373 PDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYPGSVNADPF 552
           P++ TKIGIIN P WYDAGK EYFA +STLFVIEFILFHYVE+RRWQDIK PGSVN DP 
Sbjct: 112 PEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPI 171

Query: 553 NPKLTLPPGEVGYPGGIFNPFNFPTSLEYKEKEIANG 663
               +LPP EVGYPGGIFNP NF  + E KEKE+ANG
Sbjct: 172 FKNYSLPPNEVGYPGGIFNPLNFAPTEEAKEKELANG 208



 Score = 25.0 bits (53), Expect(2) = 1e-69
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +2

Query: 164 SPVRAFKVEAKKGNGFP 214
           S  R+FKVEAKKG   P
Sbjct: 42  SSYRSFKVEAKKGEWLP 58


>tr|A9NUC5|A9NUC5_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 251

 Score =  265 bits (676), Expect = 3e-69
 Identities = 133/207 (64%), Positives = 150/207 (72%)
 Frame = +1

Query: 43  CRNGCHAGDIGRFLPFFVSMQVVFLGERLSSFSGGLCYCPFPCPCLQGRGKERQWLPGLA 222
           CR+ C +G       F     V  L  R+   S      P P    +   K  +WLPGL+
Sbjct: 14  CRSVCRSG-------FLTGSSVSRLARRVRPGSN-----PAPARSFKVEAKG-EWLPGLS 60

Query: 223 SPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLIPDLLTKIGII 402
           SP YL+G+L GDNGFDPLGLAEDP +LKWYVQAEL NGRWAMLGVAGMLIP++LT  G I
Sbjct: 61  SPTYLNGSLPGDNGFDPLGLAEDPESLKWYVQAELVNGRWAMLGVAGMLIPEVLTSFGFI 120

Query: 403 NVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYPGSVNADPFNPKLTLPPGE 582
           +VP WYDAGKVEYFA +STLFVIEFILFHYVE+RRWQDIKYPGSVN DP     +LPP E
Sbjct: 121 DVPKWYDAGKVEYFASSSTLFVIEFILFHYVELRRWQDIKYPGSVNQDPVFKNYSLPPNE 180

Query: 583 VGYPGGIFNPFNFPTSLEYKEKEIANG 663
           VGYPGGIFNP NF  S+E KEKE+ANG
Sbjct: 181 VGYPGGIFNPLNFSPSMEAKEKELANG 207


>tr|B1PDK1|B1PDK1_CAPAN Chloroplast chlorophyll a/b binding protein
           OS=Capsicum annuum PE=2 SV=1
          Length = 250

 Score =  262 bits (669), Expect(2) = 3e-69
 Identities = 120/157 (76%), Positives = 133/157 (84%)
 Frame = +1

Query: 193 KERQWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLI 372
           K+ +WLPGLASPAYLDG+L GDNGFDPLGLAEDP NLKWY+QAEL NGRWAMLGVAGML+
Sbjct: 50  KKGEWLPGLASPAYLDGSLPGDNGFDPLGLAEDPENLKWYIQAELVNGRWAMLGVAGMLL 109

Query: 373 PDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYPGSVNADPF 552
           P++ T IGI+NVP WYDAGK EYFA +STLFVIEFILFHYVE+RRWQDIK PG VN DP 
Sbjct: 110 PEVFTSIGILNVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGCVNQDPI 169

Query: 553 NPKLTLPPGEVGYPGGIFNPFNFPTSLEYKEKEIANG 663
               +LPP E GYPGGIFNP NF  + E KEKE+ANG
Sbjct: 170 FKNYSLPPNECGYPGGIFNPLNFAATEEAKEKELANG 206



 Score = 23.9 bits (50), Expect(2) = 3e-69
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +2

Query: 131 RLSRVASAIAPSPVRAFKVEAKKGNGFP 214
           +L+R  S    +   +FKVEAKKG   P
Sbjct: 29  KLNREVSFRPSTSNNSFKVEAKKGEWLP 56


>tr|B7FJY9|B7FJY9_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 253

 Score =  264 bits (674), Expect = 4e-69
 Identities = 124/166 (74%), Positives = 137/166 (82%)
 Frame = +1

Query: 166 PCPCLQGRGKERQWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWA 345
           P    +   K+ +WLPGLASP YL G+L GDNGFDPLGLAEDP NLKW+VQAEL NGRWA
Sbjct: 43  PSASFKVEAKKGEWLPGLASPGYLTGSLPGDNGFDPLGLAEDPENLKWFVQAELVNGRWA 102

Query: 346 MLGVAGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKY 525
           MLGVAGML+P++ T IGIINVP WYDAGK EYFA +STLFVIEFILFHYVE+RRWQDIK 
Sbjct: 103 MLGVAGMLLPEVFTNIGIINVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIKN 162

Query: 526 PGSVNADPFNPKLTLPPGEVGYPGGIFNPFNFPTSLEYKEKEIANG 663
           PGSVN DP   + +LP GEVGYPGGIFNP NF  +LE KEKEIANG
Sbjct: 163 PGSVNQDPIFKQYSLPKGEVGYPGGIFNPLNFAPTLEAKEKEIANG 208


>tr|Q8RVI8|Q8RVI8_PINPS Putative chlorophyll a/b-binding protein
           type 4 OS=Pinus pinaster PE=2 SV=1
          Length = 251

 Score =  262 bits (670), Expect = 1e-68
 Identities = 133/216 (61%), Positives = 152/216 (70%)
 Frame = +1

Query: 16  PEREKLVFVCRNGCHAGDIGRFLPFFVSMQVVFLGERLSSFSGGLCYCPFPCPCLQGRGK 195
           P +  L   C + C +G       F     V  L  R+   S      P P    +   K
Sbjct: 5   PTQAALGVSCPSVCRSG-------FLTGSSVSRLARRVRPGSN-----PAPARSFKVEAK 52

Query: 196 ERQWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLIP 375
             +WLPGL+SP+YL+G+L GDNG DPLGLAEDP +LKWYVQAEL NGRWAMLGVAGM IP
Sbjct: 53  G-EWLPGLSSPSYLNGSLPGDNGXDPLGLAEDPESLKWYVQAELVNGRWAMLGVAGMXIP 111

Query: 376 DLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYPGSVNADPFN 555
           ++LT IG+INVP WYDAGKVEYFA + TLFVIEFILFHYVE+RRWQDIKYPGSVN DP  
Sbjct: 112 EVLTSIGLINVPKWYDAGKVEYFASSXTLFVIEFILFHYVELRRWQDIKYPGSVNQDPIX 171

Query: 556 PKLTLPPGEVGYPGGIFNPFNFPTSLEYKEKEIANG 663
              +LPP EVGYPGGIFNP NF  S+E KEKE+ANG
Sbjct: 172 KSYSLPPNEVGYPGGIFNPLNFSPSMEAKEKELANG 207


>tr|Q7XAC6|Q7XAC6_BETVU Chlorophyll a /b binding protein OS=Beta
           vulgaris GN=cab11 PE=2 SV=1
          Length = 252

 Score =  262 bits (670), Expect = 1e-68
 Identities = 122/162 (75%), Positives = 138/162 (85%)
 Frame = +1

Query: 178 LQGRGKERQWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGV 357
           L+   K+ +WLPGLASPAYL+G+L GDNGFDPL LAEDP NLKW+VQAEL NGRWAMLGV
Sbjct: 47  LKVEAKKGEWLPGLASPAYLNGSLPGDNGFDPLALAEDPENLKWFVQAELVNGRWAMLGV 106

Query: 358 AGMLIPDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYPGSV 537
           AGML+P++ T+IGIINVP WYDAGK EYFA +STLFVIEFILFHYVE+RRWQDIK PGSV
Sbjct: 107 AGMLLPEVFTQIGIINVPKWYDAGKQEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSV 166

Query: 538 NADPFNPKLTLPPGEVGYPGGIFNPFNFPTSLEYKEKEIANG 663
           N DP   + +LPP EVGYPGGIFNP NF  + E KEKE+ANG
Sbjct: 167 NQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTAEAKEKELANG 208


>tr|Q7M1K8|Q7M1K8_SOLLC Chlorophyll a/b-binding protein (cab-12)
           OS=Solanum lycopersicum PE=4 SV=1
          Length = 250

 Score =  261 bits (666), Expect(2) = 2e-68
 Identities = 119/157 (75%), Positives = 135/157 (85%)
 Frame = +1

Query: 193 KERQWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLI 372
           K+ +WLPGL SP YL+G+LAGDNGFDPLGLAEDP NL+W+VQAEL NGRWAMLGVAGML+
Sbjct: 51  KKGEWLPGLTSPTYLNGSLAGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLL 110

Query: 373 PDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYPGSVNADPF 552
           P++ T IG++NVP WYDAGK +YFA +STLFVIEFILFHYVE+RRWQDIK PGSVN DP 
Sbjct: 111 PEVFTSIGLLNVPKWYDAGKSDYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPI 170

Query: 553 NPKLTLPPGEVGYPGGIFNPFNFPTSLEYKEKEIANG 663
               +LPP EVGYPGGIFNP NF  +LE KEKEIANG
Sbjct: 171 FKSYSLPPNEVGYPGGIFNPLNFAPTLEAKEKEIANG 207



 Score = 22.3 bits (46), Expect(2) = 2e-68
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +2

Query: 176 AFKVEAKKGNGFP 214
           +FKVEAKKG   P
Sbjct: 45  SFKVEAKKGEWLP 57


>tr|Q1H8L9|Q1H8L9_SOLTU Chlorophyll a/b binding protein OS=Solanum
           tuberosum GN=cab1 PE=2 SV=1
          Length = 251

 Score =  258 bits (660), Expect(2) = 6e-68
 Identities = 119/157 (75%), Positives = 133/157 (84%)
 Frame = +1

Query: 193 KERQWLPGLASPAYLDGNLAGDNGFDPLGLAEDPANLKWYVQAELQNGRWAMLGVAGMLI 372
           K+ QWLPGLASP YLDG+L GDNGFDPLGLAEDP NLKW++QAEL NGRWAMLGVAGML+
Sbjct: 52  KKGQWLPGLASPDYLDGSLPGDNGFDPLGLAEDPENLKWFIQAELVNGRWAMLGVAGMLL 111

Query: 373 PDLLTKIGIINVPAWYDAGKVEYFAPASTLFVIEFILFHYVEVRRWQDIKYPGSVNADPF 552
           P++ T IGI+NVP WYDAGK EYFA +STLFVIEFILFHYVE+RRWQDIK PGSVN DP 
Sbjct: 112 PEVFTSIGILNVPKWYDAGKSEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPI 171

Query: 553 NPKLTLPPGEVGYPGGIFNPFNFPTSLEYKEKEIANG 663
               +LPP + GYPGGIFNP NF  + E KEKE+ANG
Sbjct: 172 FKSYSLPPNKCGYPGGIFNPLNFAPTEEAKEKELANG 208



 Score = 23.1 bits (48), Expect(2) = 6e-68
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +2

Query: 164 SPVRAFKVEAKKGNGFP 214
           S   +FKVEAKKG   P
Sbjct: 42  SSYNSFKVEAKKGQWLP 58