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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK957305
Clone id TST39A01NGRL0028_A08
Library
Length 649
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0028_A08. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GGCTGTTGTGGAGGCGTCTTCGTAAACGTATCCATCAGCCAGCCCTCTTCTGCAAATCCT
AGATTCAACGAGCTCTCTCCTCCTCCTCCACCATGAGAGAGTGCATCTCCGTCCACATTG
GTCAGGCTGGCATCCAGGTCGGGAATGCATGCTGGGAGCTCTACTGCCTCGAGCATGGAA
TCCATCCAGATGGACAGATGCCCAGTGACAAGACTGTGGGTGGCGGTGATGATGCCTTTA
ACACCTTCTTCAGTGAGACGGGGGCGGGAAAGCATGTTCCTCGAGCTGTGTTTGTCGATT
TAGAGCCCACTGTGATTGATGAAGTCCGTACTGGTACTTACAGACAGCTCTTTCATCCTG
AGCAGCTCATCAGTGGCAAAGAGGATGCTGCCAACAACTTTGCCCGTGGCCATTATACCA
TTGGAAAGGAGATTGTTGATCTTTGCCTCGACCGCATCAGGAAGCTTGCAGATAACTGCA
CCGGTCTGCAGGGTTTTCTTGTCTTCCATGCTGTTGGAGGTGGAACTGGTTCTGGCCTTG
CATCCCTTCTTTTGGAAAGGCTATCTGTGGACTATGGGAAGAAATCAAAGCTTGGATTCA
CTGTTTATCCGTCTCCCCAGGTGTCCACATCTGTAGTTGAGCCATACAA
■■Homology search results ■■ -
sp_hit_id P29510
Definition sp|P29510|TBA2_ARATH Tubulin alpha-2/alpha-4 chain OS=Arabidopsis thaliana
Align length 185
Score (bit) 348.0
E-value 1.0e-95
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK957305|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0028_A08, 5'
         (649 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P29510|TBA2_ARATH Tubulin alpha-2/alpha-4 chain OS=Arabidopsi...   348   1e-95
sp|P33629|TBA_PRUDU Tubulin alpha chain OS=Prunus dulcis GN=TUBA...   347   4e-95
sp|P29511|TBA6_ARATH Tubulin alpha-6 chain OS=Arabidopsis thalia...   347   4e-95
sp|Q9ZRR5|TBA3_HORVU Tubulin alpha-3 chain OS=Hordeum vulgare GN...   347   4e-95
sp|Q6VAF9|TBA4_GOSHI Tubulin alpha-4 chain OS=Gossypium hirsutum...   346   5e-95
sp|Q6VAG0|TBA2_GOSHI Tubulin alpha-2 chain OS=Gossypium hirsutum...   346   5e-95
sp|Q9FT36|TBA_DAUCA Tubulin alpha chain OS=Daucus carota GN=TBA ...   345   9e-95
sp|P33623|TBA1_ANEPH Tubulin alpha-1 chain OS=Anemia phyllitidis...   345   1e-94
sp|P46259|TBA1_PEA Tubulin alpha-1 chain OS=Pisum sativum GN=TUB...   345   2e-94
sp|Q53M52|TBA2_ORYSJ Tubulin alpha-2 chain OS=Oryza sativa subsp...   344   2e-94
sp|Q6VAG1|TBA1_GOSHI Tubulin alpha-1 chain OS=Gossypium hirsutum...   344   3e-94
sp|Q96460|TBA2_HORVU Tubulin alpha-2 chain OS=Hordeum vulgare GN...   343   3e-94
sp|P14641|TBA2_MAIZE Tubulin alpha-2 chain OS=Zea mays GN=TUBA2 ...   343   4e-94
sp|P14640|TBA1_MAIZE Tubulin alpha-1 chain OS=Zea mays GN=TUBA1 ...   343   4e-94
sp|O22347|TBA1_ELEIN Tubulin alpha-1 chain OS=Eleusine indica GN...   343   4e-94
sp|Q9ZRB7|TBA_WHEAT Tubulin alpha chain OS=Triticum aestivum GN=...   342   8e-94
sp|Q9ZRJ4|TBA_CHLVU Tubulin alpha chain OS=Chlorella vulgaris GN...   340   4e-93
sp|P41351|TBA_TETTH Tubulin alpha chain OS=Tetrahymena thermophi...   337   4e-92
sp|P10872|TBA_TETPY Tubulin alpha chain OS=Tetrahymena pyriformi...   337   4e-92
sp|P09205|TBA2_CHLRE Tubulin alpha-2 chain OS=Chlamydomonas rein...   336   7e-92
sp|P11481|TBA1_VOLCA Tubulin alpha-1/alpha-2 chain OS=Volvox car...   336   7e-92
sp|P09204|TBA1_CHLRE Tubulin alpha-1 chain OS=Chlamydomonas rein...   336   7e-92
sp|P22275|TBA3_MAIZE Tubulin alpha-3 chain OS=Zea mays GN=TUBA3 ...   333   6e-91
sp|P28287|TBA_OXYGR Tubulin alpha chain OS=Oxytricha granulifera...   332   1e-90
sp|P07304|TBA1_STYLE Tubulin alpha-1 chain OS=Stylonychia lemnae...   331   2e-90
sp|Q08114|TBA_EUPOC Tubulin alpha chain OS=Euplotes octocarinatu...   330   4e-90
sp|Q3ZCJ7|TBA1C_BOVIN Tubulin alpha-1C chain OS=Bos taurus GN=TU...   330   5e-90
sp|P36220|TBA_TORMA Tubulin alpha chain OS=Torpedo marmorata PE=...   329   9e-90
sp|P06605|TBA3_DROME Tubulin alpha-3 chain OS=Drosophila melanog...   329   9e-90
sp|Q6AYZ1|TBA1C_RAT Tubulin alpha-1C chain OS=Rattus norvegicus ...   329   9e-90

>sp|P29510|TBA2_ARATH Tubulin alpha-2/alpha-4 chain OS=Arabidopsis
           thaliana GN=TUBA2 PE=2 SV=1
          Length = 450

 Score =  348 bits (893), Expect = 1e-95
 Identities = 169/185 (91%), Positives = 171/185 (92%)
 Frame = +3

Query: 93  MRECISVHIGQAGIQVGNACWELYCLEHGIHPDGQMPSDKTVGGGDDAFNTFFSETGAGK 272
           MRECIS+HIGQAGIQVGNACWELYCLEHGI PDGQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 273 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 452
           HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 453 RIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXERLSVDYGKKSKLGFTVYPSPQVSTS 632
           RIRKLADNCTGLQGFLVF+AV             ERLSVDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 633 VVEPY 647
           VVEPY
Sbjct: 181 VVEPY 185


>sp|P33629|TBA_PRUDU Tubulin alpha chain OS=Prunus dulcis GN=TUBA
           PE=2 SV=1
          Length = 450

 Score =  347 bits (889), Expect = 4e-95
 Identities = 168/185 (90%), Positives = 170/185 (91%)
 Frame = +3

Query: 93  MRECISVHIGQAGIQVGNACWELYCLEHGIHPDGQMPSDKTVGGGDDAFNTFFSETGAGK 272
           MRECIS+HIGQAGIQVGNACWELYCLEHGI PDGQMP DKTVGGGDDAFNTFFSETGAGK
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60

Query: 273 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 452
           HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 453 RIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXERLSVDYGKKSKLGFTVYPSPQVSTS 632
           RIRKLADNCTGLQGFLVF+AV             ERLSVDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 633 VVEPY 647
           VVEPY
Sbjct: 181 VVEPY 185


>sp|P29511|TBA6_ARATH Tubulin alpha-6 chain OS=Arabidopsis thaliana
           GN=TUBA6 PE=2 SV=1
          Length = 450

 Score =  347 bits (889), Expect = 4e-95
 Identities = 168/185 (90%), Positives = 170/185 (91%)
 Frame = +3

Query: 93  MRECISVHIGQAGIQVGNACWELYCLEHGIHPDGQMPSDKTVGGGDDAFNTFFSETGAGK 272
           MRECIS+HIGQAGIQVGNACWELYCLEHGI PDGQMP DKTVGGGDDAFNTFFSETGAGK
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60

Query: 273 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 452
           HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 453 RIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXERLSVDYGKKSKLGFTVYPSPQVSTS 632
           RIRKLADNCTGLQGFLVF+AV             ERLSVDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 633 VVEPY 647
           VVEPY
Sbjct: 181 VVEPY 185


>sp|Q9ZRR5|TBA3_HORVU Tubulin alpha-3 chain OS=Hordeum vulgare
           GN=TUBA3 PE=2 SV=1
          Length = 451

 Score =  347 bits (889), Expect = 4e-95
 Identities = 168/185 (90%), Positives = 170/185 (91%)
 Frame = +3

Query: 93  MRECISVHIGQAGIQVGNACWELYCLEHGIHPDGQMPSDKTVGGGDDAFNTFFSETGAGK 272
           MRECIS+HIGQAGIQVGNACWELYCLEHGI PDGQMP DKTVGGGDDAFNTFFSETGAGK
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60

Query: 273 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 452
           HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 453 RIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXERLSVDYGKKSKLGFTVYPSPQVSTS 632
           RIRKLADNCTGLQGFLVF+AV             ERLSVDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 633 VVEPY 647
           VVEPY
Sbjct: 181 VVEPY 185


>sp|Q6VAF9|TBA4_GOSHI Tubulin alpha-4 chain OS=Gossypium hirsutum
           PE=2 SV=1
          Length = 450

 Score =  346 bits (888), Expect = 5e-95
 Identities = 168/185 (90%), Positives = 170/185 (91%)
 Frame = +3

Query: 93  MRECISVHIGQAGIQVGNACWELYCLEHGIHPDGQMPSDKTVGGGDDAFNTFFSETGAGK 272
           MRECIS+HIGQAGIQVGNACWELYCLEHGI PDGQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 273 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 452
           HVPRAVFVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 453 RIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXERLSVDYGKKSKLGFTVYPSPQVSTS 632
           RIRKLADNCTGLQGFLVF+AV             ERLSVDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 633 VVEPY 647
           VVEPY
Sbjct: 181 VVEPY 185


>sp|Q6VAG0|TBA2_GOSHI Tubulin alpha-2 chain OS=Gossypium hirsutum
           PE=2 SV=1
          Length = 450

 Score =  346 bits (888), Expect = 5e-95
 Identities = 168/185 (90%), Positives = 170/185 (91%)
 Frame = +3

Query: 93  MRECISVHIGQAGIQVGNACWELYCLEHGIHPDGQMPSDKTVGGGDDAFNTFFSETGAGK 272
           MRECIS+HIGQAGIQVGNACWELYCLEHGI PDGQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 273 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 452
           HVPRAVFVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 453 RIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXERLSVDYGKKSKLGFTVYPSPQVSTS 632
           RIRKLADNCTGLQGFLVF+AV             ERLSVDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 633 VVEPY 647
           VVEPY
Sbjct: 181 VVEPY 185


>sp|Q9FT36|TBA_DAUCA Tubulin alpha chain OS=Daucus carota GN=TBA
           PE=2 SV=1
          Length = 451

 Score =  345 bits (886), Expect = 9e-95
 Identities = 166/185 (89%), Positives = 171/185 (92%)
 Frame = +3

Query: 93  MRECISVHIGQAGIQVGNACWELYCLEHGIHPDGQMPSDKTVGGGDDAFNTFFSETGAGK 272
           MRECISVHIGQAGIQ+GNACWELYCLEHGI P+GQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1   MRECISVHIGQAGIQIGNACWELYCLEHGIQPNGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 273 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 452
           HVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61  HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 453 RIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXERLSVDYGKKSKLGFTVYPSPQVSTS 632
           RIRKLADNCTGLQGFLVF+AV             ERLSVDYGKKSKLGFTVYPSPQ+STS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQISTS 180

Query: 633 VVEPY 647
           VVEPY
Sbjct: 181 VVEPY 185


>sp|P33623|TBA1_ANEPH Tubulin alpha-1 chain OS=Anemia phyllitidis
           GN=TUBA1 PE=2 SV=1
          Length = 451

 Score =  345 bits (885), Expect = 1e-94
 Identities = 169/185 (91%), Positives = 171/185 (92%)
 Frame = +3

Query: 93  MRECISVHIGQAGIQVGNACWELYCLEHGIHPDGQMPSDKTVGGGDDAFNTFFSETGAGK 272
           MRECIS+HIGQAGIQVGNA WELYCLEHGI PDGQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1   MRECISIHIGQAGIQVGNARWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 273 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 452
           HVPRAVF+DLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61  HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 453 RIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXERLSVDYGKKSKLGFTVYPSPQVSTS 632
           RIRKLADNCTGLQGFLVFHAV             ERLSVDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121 RIRKLADNCTGLQGFLVFHAVGGXTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 633 VVEPY 647
           VVEPY
Sbjct: 181 VVEPY 185


>sp|P46259|TBA1_PEA Tubulin alpha-1 chain OS=Pisum sativum GN=TUBA1
           PE=3 SV=1
          Length = 452

 Score =  345 bits (884), Expect = 2e-94
 Identities = 167/185 (90%), Positives = 169/185 (91%)
 Frame = +3

Query: 93  MRECISVHIGQAGIQVGNACWELYCLEHGIHPDGQMPSDKTVGGGDDAFNTFFSETGAGK 272
           MRECIS+HIGQAGIQVGNACWELYCLEHGI PDGQMP DKTVGGGDDAFNTFFSETGAGK
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60

Query: 273 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 452
           HVPRAVFVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 453 RIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXERLSVDYGKKSKLGFTVYPSPQVSTS 632
           RIRKLADNCTGLQGFLVF+AV             ERLSVDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 633 VVEPY 647
           VVEPY
Sbjct: 181 VVEPY 185


>sp|Q53M52|TBA2_ORYSJ Tubulin alpha-2 chain OS=Oryza sativa subsp.
           japonica GN=TUBA PE=2 SV=1
          Length = 451

 Score =  344 bits (883), Expect = 2e-94
 Identities = 167/185 (90%), Positives = 169/185 (91%)
 Frame = +3

Query: 93  MRECISVHIGQAGIQVGNACWELYCLEHGIHPDGQMPSDKTVGGGDDAFNTFFSETGAGK 272
           MRECIS+HIGQAGIQVGNACWELYCLEHGI PDGQMP DKTVGGGDDAFNTFFSETGAGK
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60

Query: 273 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 452
           HVPRAVFVDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 453 RIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXERLSVDYGKKSKLGFTVYPSPQVSTS 632
           RIRKLADNCTGLQGFLVF+AV             ERLSVDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 633 VVEPY 647
           VVEPY
Sbjct: 181 VVEPY 185
tr_hit_id A7PMS7
Definition tr|A7PMS7|A7PMS7_VITVI Chromosome chr14 scaffold_21, whole genome shotgun sequence OS=Vitis vinifera
Align length 185
Score (bit) 350.0
E-value 5.0e-95
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK957305|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0028_A08, 5'
         (649 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7PMS7|A7PMS7_VITVI Chromosome chr14 scaffold_21, whole genom...   350   5e-95
tr|A9PL15|A9PL15_GOSHI Alpha-tubulin OS=Gossypium hirsutum GN=TU...   348   1e-94
tr|Q5ME66|Q5ME66_PSEMZ Alpha tubulin 1 OS=Pseudotsuga menziesii ...   348   2e-94
tr|Q0WV25|Q0WV25_ARATH Tubulin alpha-2/alpha-4 chain OS=Arabidop...   348   2e-94
tr|B7TIW7|B7TIW7_BETVE Alpha tubulin OS=Betula verrucosa PE=2 SV=1    348   2e-94
tr|A9QVH4|A9QVH4_9CONI Alpha tubulin OS=Picea wilsonii GN=TUA1 P...   348   2e-94
tr|A9PL19|A9PL19_GOSHI Alpha-tubulin OS=Gossypium hirsutum GN=TU...   348   2e-94
tr|A9P849|A9P849_POPTR Putative uncharacterized protein OS=Popul...   348   2e-94
tr|A5HJR1|A5HJR1_THEHA TUA2 (TUA2-2) OS=Thellungiella halophila ...   348   2e-94
tr|Q84UZ5|Q84UZ5_CERRI Alpha-tubulin OS=Ceratopteris richardii G...   348   2e-94
tr|A7QZH1|A7QZH1_VITVI Chromosome chr7 scaffold_275, whole genom...   348   2e-94
tr|A9PL16|A9PL16_GOSHI Alpha-tubulin OS=Gossypium hirsutum GN=TU...   347   4e-94
tr|Q8H6L8|Q8H6L8_GOSHI Alpha-tubulin 4 (Fragment) OS=Gossypium h...   347   5e-94
tr|Q3EA24|Q3EA24_ARATH Uncharacterized protein At4g14960.1 OS=Ar...   347   5e-94
tr|Q1ZZV1|Q1ZZV1_BRACM Tubulin alpha-1 chain OS=Brassica rapa su...   347   5e-94
tr|A9PL21|A9PL21_GOSHI Alpha-tubulin OS=Gossypium hirsutum GN=TU...   347   5e-94
tr|A9P817|A9P817_POPTR Putative uncharacterized protein OS=Popul...   347   5e-94
tr|A5YRY1|A5YRY1_POPTM Alpha-tubulin 5 OS=Populus tremuloides PE...   347   5e-94
tr|A4K4Y4|A4K4Y4_WHEAT Alpha tubulin-3B (Alpha tubulin-3A) (Alph...   347   5e-94
tr|Q8VXD1|Q8VXD1_TOBAC Alpha-tubulin OS=Nicotiana tabacum GN=tub...   346   6e-94
tr|Q8VXC9|Q8VXC9_TOBAC Alpha-tubulin OS=Nicotiana tabacum GN=tub...   346   6e-94
tr|Q38JI1|Q38JI1_SOLTU Putative uncharacterized protein OS=Solan...   346   6e-94
tr|A9PL18|A9PL18_GOSHI Alpha-tubulin OS=Gossypium hirsutum GN=TU...   346   6e-94
tr|A5BZF5|A5BZF5_VITVI Putative uncharacterized protein (Chromos...   346   6e-94
tr|Q9M3T2|Q9M3T2_BETVE Alpha-tubulin OS=Betula verrucosa GN=atub...   346   8e-94
tr|Q8VXD0|Q8VXD0_TOBAC Alpha-tubulin OS=Nicotiana tabacum GN=tub...   346   8e-94
tr|Q84XV0|Q84XV0_POPTM Alpha tubulin OS=Populus tremuloides PE=2...   346   8e-94
tr|Q84TK6|Q84TK6_POPTM Alpha-tubulin 1 OS=Populus tremuloides PE...   346   8e-94
tr|A9SEI4|A9SEI4_PHYPA Predicted protein OS=Physcomitrella paten...   346   8e-94
tr|A9PHZ8|A9PHZ8_POPTR Putative uncharacterized protein OS=Popul...   346   8e-94

>tr|A7PMS7|A7PMS7_VITVI Chromosome chr14 scaffold_21, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00020930001
           PE=3 SV=1
          Length = 450

 Score =  350 bits (897), Expect = 5e-95
 Identities = 169/185 (91%), Positives = 171/185 (92%)
 Frame = +3

Query: 93  MRECISVHIGQAGIQVGNACWELYCLEHGIHPDGQMPSDKTVGGGDDAFNTFFSETGAGK 272
           MRECIS+HIGQAGIQVGNACWELYCLEHGI PDGQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 273 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 452
           HVPRAVF+DLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61  HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 453 RIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXERLSVDYGKKSKLGFTVYPSPQVSTS 632
           RIRKLADNCTGLQGFLVFHAV             ERLSVDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121 RIRKLADNCTGLQGFLVFHAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 633 VVEPY 647
           VVEPY
Sbjct: 181 VVEPY 185


>tr|A9PL15|A9PL15_GOSHI Alpha-tubulin OS=Gossypium hirsutum GN=TUA6
           PE=2 SV=1
          Length = 450

 Score =  348 bits (894), Expect = 1e-94
 Identities = 170/185 (91%), Positives = 171/185 (92%)
 Frame = +3

Query: 93  MRECISVHIGQAGIQVGNACWELYCLEHGIHPDGQMPSDKTVGGGDDAFNTFFSETGAGK 272
           MRECISVHIGQAGIQVGNACWELYCLEHGI PDGQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1   MRECISVHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 273 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 452
           HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 453 RIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXERLSVDYGKKSKLGFTVYPSPQVSTS 632
           RIRKLADNCTGLQGFLVF+AV             ERLSVDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 633 VVEPY 647
           VVEPY
Sbjct: 181 VVEPY 185


>tr|Q5ME66|Q5ME66_PSEMZ Alpha tubulin 1 OS=Pseudotsuga menziesii
           var. menziesii GN=AT1 PE=3 SV=1
          Length = 451

 Score =  348 bits (893), Expect = 2e-94
 Identities = 169/185 (91%), Positives = 171/185 (92%)
 Frame = +3

Query: 93  MRECISVHIGQAGIQVGNACWELYCLEHGIHPDGQMPSDKTVGGGDDAFNTFFSETGAGK 272
           MRECIS+HIGQAGIQVGNACWELYCLEHGI PDGQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 273 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 452
           HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 453 RIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXERLSVDYGKKSKLGFTVYPSPQVSTS 632
           RIRKLADNCTGLQGFLVF+AV             ERLSVDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 633 VVEPY 647
           VVEPY
Sbjct: 181 VVEPY 185


>tr|Q0WV25|Q0WV25_ARATH Tubulin alpha-2/alpha-4 chain OS=Arabidopsis
           thaliana GN=At1g04820 PE=2 SV=1
          Length = 450

 Score =  348 bits (893), Expect = 2e-94
 Identities = 169/185 (91%), Positives = 171/185 (92%)
 Frame = +3

Query: 93  MRECISVHIGQAGIQVGNACWELYCLEHGIHPDGQMPSDKTVGGGDDAFNTFFSETGAGK 272
           MRECIS+HIGQAGIQVGNACWELYCLEHGI PDGQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 273 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 452
           HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 453 RIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXERLSVDYGKKSKLGFTVYPSPQVSTS 632
           RIRKLADNCTGLQGFLVF+AV             ERLSVDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 633 VVEPY 647
           VVEPY
Sbjct: 181 VVEPY 185


>tr|B7TIW7|B7TIW7_BETVE Alpha tubulin OS=Betula verrucosa PE=2 SV=1
          Length = 450

 Score =  348 bits (893), Expect = 2e-94
 Identities = 169/185 (91%), Positives = 171/185 (92%)
 Frame = +3

Query: 93  MRECISVHIGQAGIQVGNACWELYCLEHGIHPDGQMPSDKTVGGGDDAFNTFFSETGAGK 272
           MRECIS+HIGQAGIQVGNACWELYCLEHGI PDGQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 273 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 452
           HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 453 RIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXERLSVDYGKKSKLGFTVYPSPQVSTS 632
           RIRKLADNCTGLQGFLVF+AV             ERLSVDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 633 VVEPY 647
           VVEPY
Sbjct: 181 VVEPY 185


>tr|A9QVH4|A9QVH4_9CONI Alpha tubulin OS=Picea wilsonii GN=TUA1 PE=2
           SV=1
          Length = 451

 Score =  348 bits (893), Expect = 2e-94
 Identities = 169/185 (91%), Positives = 171/185 (92%)
 Frame = +3

Query: 93  MRECISVHIGQAGIQVGNACWELYCLEHGIHPDGQMPSDKTVGGGDDAFNTFFSETGAGK 272
           MRECIS+HIGQAGIQVGNACWELYCLEHGI PDGQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 273 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 452
           HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 453 RIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXERLSVDYGKKSKLGFTVYPSPQVSTS 632
           RIRKLADNCTGLQGFLVF+AV             ERLSVDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 633 VVEPY 647
           VVEPY
Sbjct: 181 VVEPY 185


>tr|A9PL19|A9PL19_GOSHI Alpha-tubulin OS=Gossypium hirsutum GN=TUA10
           PE=2 SV=1
          Length = 450

 Score =  348 bits (893), Expect = 2e-94
 Identities = 169/185 (91%), Positives = 171/185 (92%)
 Frame = +3

Query: 93  MRECISVHIGQAGIQVGNACWELYCLEHGIHPDGQMPSDKTVGGGDDAFNTFFSETGAGK 272
           MRECISVHIGQAGIQVGNACWELYCLEHGI PDGQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1   MRECISVHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 273 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 452
           HVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61  HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 453 RIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXERLSVDYGKKSKLGFTVYPSPQVSTS 632
           RIRKLADNCTGLQGFLVF+AV             ERLSVDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 633 VVEPY 647
           VVEPY
Sbjct: 181 VVEPY 185


>tr|A9P849|A9P849_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 451

 Score =  348 bits (893), Expect = 2e-94
 Identities = 169/185 (91%), Positives = 171/185 (92%)
 Frame = +3

Query: 93  MRECISVHIGQAGIQVGNACWELYCLEHGIHPDGQMPSDKTVGGGDDAFNTFFSETGAGK 272
           MRECIS+HIGQAGIQVGNACWELYCLEHGI PDGQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 273 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 452
           HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 453 RIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXERLSVDYGKKSKLGFTVYPSPQVSTS 632
           RIRKLADNCTGLQGFLVF+AV             ERLSVDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 633 VVEPY 647
           VVEPY
Sbjct: 181 VVEPY 185


>tr|A5HJR1|A5HJR1_THEHA TUA2 (TUA2-2) OS=Thellungiella halophila
           PE=2 SV=1
          Length = 450

 Score =  348 bits (893), Expect = 2e-94
 Identities = 169/185 (91%), Positives = 171/185 (92%)
 Frame = +3

Query: 93  MRECISVHIGQAGIQVGNACWELYCLEHGIHPDGQMPSDKTVGGGDDAFNTFFSETGAGK 272
           MRECIS+HIGQAGIQVGNACWELYCLEHGI PDGQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 273 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 452
           HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61  HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 453 RIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXERLSVDYGKKSKLGFTVYPSPQVSTS 632
           RIRKLADNCTGLQGFLVF+AV             ERLSVDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 633 VVEPY 647
           VVEPY
Sbjct: 181 VVEPY 185


>tr|Q84UZ5|Q84UZ5_CERRI Alpha-tubulin OS=Ceratopteris richardii
           GN=TUA1 PE=2 SV=1
          Length = 450

 Score =  348 bits (892), Expect = 2e-94
 Identities = 168/185 (90%), Positives = 171/185 (92%)
 Frame = +3

Query: 93  MRECISVHIGQAGIQVGNACWELYCLEHGIHPDGQMPSDKTVGGGDDAFNTFFSETGAGK 272
           MRECIS+HIGQAGIQVGNACWELYCLEHGI PDGQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1   MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60

Query: 273 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 452
           HVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
Sbjct: 61  HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120

Query: 453 RIRKLADNCTGLQGFLVFHAVXXXXXXXXXXXXXERLSVDYGKKSKLGFTVYPSPQVSTS 632
           RIRKLADNCTGLQGFLVF+AV             ERLSVDYGKKSKLGFTVYPSPQVSTS
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180

Query: 633 VVEPY 647
           VVEPY
Sbjct: 181 VVEPY 185