DK957324 |
Clone id |
TST39A01NGRL0028_B03 |
Library |
TST39 |
Length |
648 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0028_B03. 5' end sequence. |
Accession |
DK957324 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL2756Contig1 |
Sequence |
CAACAAACAGCTTTTGGCTCACTGGAAAAGAGACCGACGAAAACCCATTGCGGCCTGCAG AGAATCGTCAATGAGGGCTTCTGTGAACAGGCCTCCTACACCTGATGGAGACGATGAGAA AGGGGCAGAGCCAACCCTTCAAGAGATTATCAACATAAAACTCGTTGAAAGTGGAGAGAA GGAAAAGCTGAAGGAGTTGTTGAGGGAGAGGCTTATTGAGTGTGGATGGAAGGACGAGAT GAAGGGCCATTGCAGAGCTTTTACTAGAAAAAGAGGCAGAACAGATGTGACACTCGACGA ACTCATTCGAACAATCACCCCCAAAGGAAGATCATCAGTACCTGACACTGTGAAAGCAGA GTTACTACAACGCATACGAAGCTTTCTTTTATCTGCTGCTTTATAAATGAGAGCCACCAT GTGTTCGTGAATGAGATGAGCAGTCTCTGGTGCTCATCTTTGCATTTTAGGCTTGGCATG GGAATCCTGTCTCTTATGGTGGACAACGTCTTCACCACTGGCAAAGCTGGAGATAGAAGA AGCAAGCACATGAGGCCTTTTCAATGTAAGTGCAGATGGAGTAGATTATGCCATGTGTCT TGGCGAGCTAAGATGAGGTTGTTGTCCCTGGAGAGTAGCGATATTTCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9JIX0 |
Definition |
sp|Q9JIX0|ENY2_MOUSE Enhancer of yellow 2 transcription factor homolog OS=Mus musculus |
Align length |
88 |
Score (bit) |
89.7 |
E-value |
1.0e-17 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NRQ0 |
Definition |
tr|A9NRQ0|A9NRQ0_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
114 |
Score (bit) |
163.0 |
E-value |
7.0e-39 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957324|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0028_B03, 5' (648 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NRQ0|A9NRQ0_PICSI Putative uncharacterized protein OS=Picea... 163 7e-39 tr|A9SEI5|A9SEI5_PHYPA Predicted protein OS=Physcomitrella paten... 151 4e-35 tr|A9RY47|A9RY47_PHYPA Predicted protein OS=Physcomitrella paten... 144 6e-33 tr|B6T6J7|B6T6J7_MAIZE E2 protein isoform 5 OS=Zea mays PE=4 SV=1 141 3e-32 tr|A7P9U2|A7P9U2_VITVI Chromosome chr14 scaffold_9, whole genome... 137 6e-31 tr|Q0JGJ6|Q0JGJ6_ORYSJ cDNA clone:J013034A14, full insert sequen... 135 3e-30 tr|Q6NQ54|Q6NQ54_ARATH At3g27100 (Putative uncharacterized prote... 132 2e-29 tr|B6TAW6|B6TAW6_MAIZE E2 protein isoform 5 OS=Zea mays PE=4 SV=1 128 3e-28 tr|B4FGX1|B4FGX1_MAIZE Putative uncharacterized protein OS=Zea m... 125 2e-27 tr|B8A8E7|B8A8E7_ORYSI Putative uncharacterized protein OS=Oryza... 124 4e-27 tr|B3H7K2|B3H7K2_ARATH Uncharacterized protein At3g27100.2 OS=Ar... 100 6e-20 tr|A9T3R4|A9T3R4_PHYPA Predicted protein (Fragment) OS=Physcomit... 100 6e-20 tr|Q5JJJ7|Q5JJJ7_ORYSJ Putative uncharacterized protein B1793G04... 98 4e-19 tr|A7S403|A7S403_NEMVE Predicted protein OS=Nematostella vectens... 91 8e-17 tr|B5FZ63|B5FZ63_TAEGU Putative e(Y)2 protein OS=Taeniopygia gut... 89 2e-16 tr|B6PRW9|B6PRW9_BRAFL Putative uncharacterized protein OS=Branc... 89 3e-16 tr|Q4T2T1|Q4T2T1_TETNG Chromosome undetermined SCAF10190, whole ... 88 5e-16 tr|Q4H3N8|Q4H3N8_CIOIN Ci-E(Y)2 protein OS=Ciona intestinalis GN... 87 7e-16 tr|B7Q2C5|B7Q2C5_IXOSC Transcription factor E(Y)2, putative OS=I... 87 7e-16 tr|B2RYZ5|B2RYZ5_XENTR LOC100170422 protein OS=Xenopus tropicali... 87 9e-16 tr|B5XGH3|B5XGH3_SALSA Enhancer of yellow 2 transcription factor... 84 7e-15 tr|B5X8H8|B5X8H8_SALSA Enhancer of yellow 2 transcription factor... 80 1e-13 tr|B7PV87|B7PV87_IXOSC Transcription factor E(Y)2, putative OS=I... 79 2e-13 tr|B5XC71|B5XC71_SALSA Enhancer of yellow 2 transcription factor... 78 4e-13 tr|A8JER6|A8JER6_CHLRE Predicted protein OS=Chlamydomonas reinha... 74 8e-12 tr|Q9LSC5|Q9LSC5_ARATH Genomic DNA, chromosome 3, P1 clone: MOJ1... 67 9e-10 tr|B3RIP9|B3RIP9_TRIAD Putative uncharacterized protein OS=Trich... 63 1e-08 tr|B4L1Z8|B4L1Z8_DROMO GI15902 OS=Drosophila mojavensis GN=GI159... 60 1e-07 tr|A0BIB7|A0BIB7_PARTE Chromosome undetermined scaffold_11, whol... 60 1e-07 tr|B4NUB3|B4NUB3_DROSI GD24533 OS=Drosophila simulans GN=GD24533... 59 2e-07
>tr|A9NRQ0|A9NRQ0_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 141
Score = 163 bits (413), Expect = 7e-39 Identities = 80/114 (70%), Positives = 90/114 (78%) Frame = +2
Query: 62 ESSMRASVNRPPTPDGDDEKGAEPTLQEIINIKLVESGXXXXXXXXXXXXXIECGWKDEM 241 E+ MRAS+NRPPTPD D+E EPTLQEIINIKL+ESG IECGWKDEM Sbjct: 28 ENDMRASINRPPTPDHDEETKPEPTLQEIINIKLIESGEKEKLKELLRERLIECGWKDEM 87
Query: 242 KGHCRAFTRKRGRTDVTLDELIRTITPKGRSSVPDTVKAELLQRIRSFLLSAAL 403 K CRAFTRK+GR+ VT+DEL+ ITPKGRSSVPD+VKAELLQRIRSFL+SA L Sbjct: 88 KAQCRAFTRKKGRSSVTVDELVHAITPKGRSSVPDSVKAELLQRIRSFLMSATL 141
>tr|A9SEI5|A9SEI5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_184100 PE=4 SV=1 Length = 111
Score = 151 bits (381), Expect = 4e-35 Identities = 71/106 (66%), Positives = 85/106 (80%) Frame = +2
Query: 71 MRASVNRPPTPDGDDEKGAEPTLQEIINIKLVESGXXXXXXXXXXXXXIECGWKDEMKGH 250 MRASV+RPPTPD D+++ EPTLQEIINIKL+ESG IECGW+D++K Sbjct: 1 MRASVHRPPTPDADEDREPEPTLQEIINIKLIESGEKERLKELLRERLIECGWRDDLKAQ 60
Query: 251 CRAFTRKRGRTDVTLDELIRTITPKGRSSVPDTVKAELLQRIRSFL 388 CRAFTRK+GR ++TLDEL+R+ITPKGR+ VPD VKAELLQRIRSFL Sbjct: 61 CRAFTRKKGRANITLDELVRSITPKGRAMVPDNVKAELLQRIRSFL 106
>tr|A9RY47|A9RY47_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_179334 PE=4 SV=1 Length = 114
Score = 144 bits (362), Expect = 6e-33 Identities = 69/110 (62%), Positives = 82/110 (74%) Frame = +2
Query: 71 MRASVNRPPTPDGDDEKGAEPTLQEIINIKLVESGXXXXXXXXXXXXXIECGWKDEMKGH 250 MRASV RP TPDGD+++ EPTLQE+INIKL ESG IECGW+DE+K Sbjct: 1 MRASVIRPSTPDGDEDREPEPTLQEMINIKLTESGEKERLKELLRERLIECGWRDELKAQ 60
Query: 251 CRAFTRKRGRTDVTLDELIRTITPKGRSSVPDTVKAELLQRIRSFLLSAA 400 CRAF K+GR ++T+DEL+RTITPKGR+ VPD VKAELLQRIR FL + A Sbjct: 61 CRAFAEKKGRNNITVDELVRTITPKGRTMVPDNVKAELLQRIRHFLTTTA 110
>tr|B6T6J7|B6T6J7_MAIZE E2 protein isoform 5 OS=Zea mays PE=4 SV=1 Length = 112
Score = 141 bits (356), Expect = 3e-32 Identities = 67/111 (60%), Positives = 84/111 (75%) Frame = +2
Query: 71 MRASVNRPPTPDGDDEKGAEPTLQEIINIKLVESGXXXXXXXXXXXXXIECGWKDEMKGH 250 MRAS+NRPPTP ++++ +P+L EIINIKLVE+G ECGW+DEMK Sbjct: 1 MRASINRPPTPSAEEDRDKQPSLGEIINIKLVETGEKEKLMELLRERLAECGWRDEMKAL 60
Query: 251 CRAFTRKRGRTDVTLDELIRTITPKGRSSVPDTVKAELLQRIRSFLLSAAL 403 CRA+ RK+GR +VT+D+LI ITPKGR+SVPD+VKAELLQRIRSFL+S L Sbjct: 61 CRAYARKKGRNNVTVDDLIHVITPKGRASVPDSVKAELLQRIRSFLMSTTL 111
>tr|A7P9U2|A7P9U2_VITVI Chromosome chr14 scaffold_9, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00037850001 PE=4 SV=1 Length = 119
Score = 137 bits (345), Expect = 6e-31 Identities = 66/110 (60%), Positives = 83/110 (75%) Frame = +2
Query: 74 RASVNRPPTPDGDDEKGAEPTLQEIINIKLVESGXXXXXXXXXXXXXIECGWKDEMKGHC 253 R SVNRPPTPD ++ EP++ EIINIKL+ESG IECGWKDEMK C Sbjct: 10 RPSVNRPPTPDARLDREKEPSVLEIINIKLIESGEKERLMELLRERLIECGWKDEMKALC 69
Query: 254 RAFTRKRGRTDVTLDELIRTITPKGRSSVPDTVKAELLQRIRSFLLSAAL 403 RAF +K+GR +VT+D+L+ I PKGR+S+PD+VKAELLQRIR+FL+SAA+ Sbjct: 70 RAFVKKKGRNNVTVDDLVHVIMPKGRASIPDSVKAELLQRIRTFLVSAAV 119
>tr|Q0JGJ6|Q0JGJ6_ORYSJ cDNA clone:J013034A14, full insert sequence OS=Oryza sativa subsp. japonica GN=Os01g0920200 PE=4 SV=1 Length = 113
Score = 135 bits (339), Expect = 3e-30 Identities = 64/110 (58%), Positives = 85/110 (77%) Frame = +2
Query: 71 MRASVNRPPTPDGDDEKGAEPTLQEIINIKLVESGXXXXXXXXXXXXXIECGWKDEMKGH 250 M AS+NRPPTP+ +++ E +L+EIIN+KLVESG +ECGW+DEMK Sbjct: 1 MWASINRPPTPNREEDPQKELSLREIINVKLVESGEKEKLMELLRERLVECGWRDEMKAL 60
Query: 251 CRAFTRKRGRTDVTLDELIRTITPKGRSSVPDTVKAELLQRIRSFLLSAA 400 CRA+ RK+GR +VT+D+LI ITPKGR+SVPD+VKAELLQRI+SFL+S++ Sbjct: 61 CRAYARKKGRNNVTVDDLIHVITPKGRASVPDSVKAELLQRIQSFLMSSS 110
>tr|Q6NQ54|Q6NQ54_ARATH At3g27100 (Putative uncharacterized protein At3g27100) OS=Arabidopsis thaliana GN=At3g27100 PE=2 SV=1 Length = 115
Score = 132 bits (332), Expect = 2e-29 Identities = 68/115 (59%), Positives = 83/115 (72%), Gaps = 4/115 (3%) Frame = +2
Query: 71 MRASVNRPPTPDGDDEKGA----EPTLQEIINIKLVESGXXXXXXXXXXXXXIECGWKDE 238 M+ SVNRPPTPD DD + TL+EIIN+KLVESG +ECGWKDE Sbjct: 1 MKHSVNRPPTPDEDDVADGFEKDKVTLREIINVKLVESGEKENLMELVRDRLVECGWKDE 60
Query: 239 MKGHCRAFTRKRGRTDVTLDELIRTITPKGRSSVPDTVKAELLQRIRSFLLSAAL 403 M+ CR +K+GR DVT+DELIR ITPKGR+SVPD+VKAELL RI++F++SAAL Sbjct: 61 MRIACREHVKKKGRKDVTVDELIRVITPKGRASVPDSVKAELLNRIQNFIVSAAL 115
>tr|B6TAW6|B6TAW6_MAIZE E2 protein isoform 5 OS=Zea mays PE=4 SV=1 Length = 111
Score = 128 bits (322), Expect = 3e-28 Identities = 61/106 (57%), Positives = 75/106 (70%) Frame = +2
Query: 71 MRASVNRPPTPDGDDEKGAEPTLQEIINIKLVESGXXXXXXXXXXXXXIECGWKDEMKGH 250 MR S+NRPPTP +++ EP+L EIINIK VESG +ECGW DEMK Sbjct: 1 MRESINRPPTPSAVEDRDKEPSLVEIINIKFVESGEKEKLTELLRERLVECGWMDEMKAF 60
Query: 251 CRAFTRKRGRTDVTLDELIRTITPKGRSSVPDTVKAELLQRIRSFL 388 CR + RK+GR +V +D+LI I PKGR+SVPD+VKAELLQRIRSF+ Sbjct: 61 CRDYVRKKGRNNVRVDDLIHVIVPKGRASVPDSVKAELLQRIRSFM 106
>tr|B4FGX1|B4FGX1_MAIZE Putative uncharacterized protein OS=Zea mays PE=4 SV=1 Length = 111
Score = 125 bits (314), Expect = 2e-27 Identities = 60/106 (56%), Positives = 74/106 (69%) Frame = +2
Query: 71 MRASVNRPPTPDGDDEKGAEPTLQEIINIKLVESGXXXXXXXXXXXXXIECGWKDEMKGH 250 MR S+NRPPTP +++ EP+L EIINIK VESG +ECGW DEMK Sbjct: 1 MRESINRPPTPSAVEDRDKEPSLVEIINIKFVESGEKEKLTELLRERLVECGWMDEMKAF 60
Query: 251 CRAFTRKRGRTDVTLDELIRTITPKGRSSVPDTVKAELLQRIRSFL 388 CR + RK+GR +V +D+LI I PKGR+SVP +VKAELLQRIRSF+ Sbjct: 61 CRDYVRKKGRNNVRVDDLIHVIVPKGRASVPASVKAELLQRIRSFM 106
>tr|B8A8E7|B8A8E7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_04959 PE=4 SV=1 Length = 162
Score = 124 bits (312), Expect = 4e-27 Identities = 65/134 (48%), Positives = 86/134 (64%), Gaps = 24/134 (17%) Frame = +2
Query: 71 MRASVNRPPTPDGDDEKGAEPTLQEIINIK------------------------LVESGX 178 MRAS+NRPPTP+ +++ E +L+EIIN+K LVESG Sbjct: 26 MRASINRPPTPNREEDPQKELSLREIINVKFLPLGAEKAVDSPATGDVQSPKKRLVESGE 85
Query: 179 XXXXXXXXXXXXIECGWKDEMKGHCRAFTRKRGRTDVTLDELIRTITPKGRSSVPDTVKA 358 +ECGW+DEMK CRA+ RK+GR +VT+D+LI ITPKGR+SVPD+VKA Sbjct: 86 KEKLMELLRERLVECGWRDEMKALCRAYARKKGRNNVTVDDLIHVITPKGRASVPDSVKA 145
Query: 359 ELLQRIRSFLLSAA 400 ELLQRI+SFL+S++ Sbjct: 146 ELLQRIQSFLMSSS 159
|