DK957332 |
Clone id |
TST39A01NGRL0028_B11 |
Library |
TST39 |
Length |
675 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0028_B11. 5' end sequence. |
Accession |
DK957332 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL162Contig1 |
Sequence |
GCAGTGAAGAAGGCGATGGAGTACCATCCAGGCCCAGGTCGGAATCAGCTCTTTGTGCCA GGGCCCGTGAATGTCCCCGAGCAAGTTCTGCGCGCCATGAACCGCAACAATGAAGACTAC CGCTCCCCCGCCATGCCTACCCTCTCCAAGTCCGTTCTTGAGGATATCAAACGCATCTTC AAGACCACAACAGCTACTTCCTTCATCATTCCCACCACAGGAACTGGTGCTTGGGAGAGT GCTCTAACCAACACCCTGTCTCCAAGGGACAAAATCCTCACCTTCAGGCTGGGGCAATTC AGTCTTCTATGGGTAGACCAGATGCAGCGGCTCAATTTTGATGTTGATGTGGTGGATGTG GAATGGGGTGCTGGTGTTGACCTCTCAGTGCTTCTAGCAAAGCTTCAGTCTGACACCAAA CATGAAATTAAGGCTGTGTGCGTAGTTCACAATGAGACAGCAACAGGCGTTACCAATGAT CTTGCTGGGATTCGCAATGTCATAGATGCATGCCAGCATCCAGCTCTCTTTCTTGTGGAT GGTGTATCATCTATTTGTGCGCTAGACTTTCGAATGGATGAGTGGTGCATAGATGTTGCA CTAACTGGTTCGCAGAAGGCCCTCTCTCTACCAACTGGTCTTGGAATTGTGTGTGCAAGC CCCAAAGCCTTGGAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q56YA5 |
Definition |
sp|Q56YA5|SGAT_ARATH Serine--glyoxylate aminotransferase OS=Arabidopsis thaliana |
Align length |
220 |
Score (bit) |
322.0 |
E-value |
1.0e-87 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957332|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0028_B11, 5' (675 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q56YA5|SGAT_ARATH Serine--glyoxylate aminotransferase OS=Arab... 322 1e-87 sp|O08374|SGAA_HYPME Serine--glyoxylate aminotransferase OS=Hyph... 220 6e-57 sp|P55819|SGAA_METEX Serine--glyoxylate aminotransferase OS=Meth... 197 6e-50 sp|P16421|DHSS_ANACY Soluble hydrogenase 42 kDa subunit OS=Anaba... 129 2e-29 sp|P14776|DHSS_SYNP1 Soluble hydrogenase, small subunit OS=Synec... 105 2e-22 sp|Q58369|Y959_METJA Uncharacterized aminotransferase MJ0959 OS=... 102 2e-21 sp|O32148|PUCG_BACSU Purine catabolism protein pucG OS=Bacillus ... 99 2e-20 sp|P43567|AGX1_YEAST Alanine--glyoxylate aminotransferase 1 OS=S... 92 3e-18 sp|P21549|SPYA_HUMAN Serine--pyruvate aminotransferase OS=Homo s... 73 1e-12 sp|Q54GT6|SPYA_DICDI Serine--pyruvate aminotransferase OS=Dictyo... 70 8e-12 sp|Q5RDP0|SPYA_PONAB Serine--pyruvate aminotransferase OS=Pongo ... 68 4e-11 sp|O35423|SPYA_MOUSE Serine--pyruvate aminotransferase, mitochon... 68 4e-11 sp|P09139|SPYA_RAT Serine--pyruvate aminotransferase, mitochondr... 66 1e-10 sp|P31030|SPYA_RABIT Serine--pyruvate aminotransferase OS=Orycto... 66 1e-10 sp|P41689|SPYA_FELCA Serine--pyruvate aminotransferase, mitochon... 64 7e-10 sp|P31029|SPYA_CALJA Serine--pyruvate aminotransferase, mitochon... 61 5e-09 sp|P84187|SGAT_MAIZE Serine--glyoxylate aminotransferase (Fragme... 59 3e-08 sp|B1HPR6|PHNW_LYSSC 2-aminoethylphosphonate--pyruvate transamin... 54 1e-06 sp|A6L4N0|PHNW_BACV8 2-aminoethylphosphonate--pyruvate transamin... 53 2e-06 sp|O25436|Y736_HELPY Uncharacterized aminotransferase HP_0736 OS... 51 5e-06 sp|Q9KLY7|PHNW_VIBCH 2-aminoethylphosphonate--pyruvate transamin... 51 6e-06 sp|A5F049|PHNW_VIBC3 2-aminoethylphosphonate--pyruvate transamin... 51 6e-06 sp|Q9ZLA7|Y736_HELPJ Uncharacterized aminotransferase jhp_0673 O... 50 8e-06 sp|Q183T0|PHNXW_CLOD6 Bifunctional phosphonoacetaldehyde hydrola... 49 2e-05 sp|Q6HLM0|PHNW_BACHK 2-aminoethylphosphonate--pyruvate transamin... 49 2e-05 sp|Q63E45|PHNW_BACCZ 2-aminoethylphosphonate--pyruvate transamin... 49 2e-05 sp|Q81TE0|PHNW_BACAN 2-aminoethylphosphonate--pyruvate transamin... 49 2e-05 sp|A0RBE9|PHNW_BACAH 2-aminoethylphosphonate--pyruvate transamin... 49 3e-05 sp|Q7MF44|PHNW_VIBVY 2-aminoethylphosphonate--pyruvate transamin... 48 4e-05 sp|Q9I434|PHNW_PSEAE 2-aminoethylphosphonate--pyruvate transamin... 48 4e-05
>sp|Q56YA5|SGAT_ARATH Serine--glyoxylate aminotransferase OS=Arabidopsis thaliana GN=AGT1 PE=1 SV=2 Length = 401
Score = 322 bits (825), Expect = 1e-87 Identities = 152/220 (69%), Positives = 182/220 (82%) Frame = +1
Query: 16 MEYHPGPGRNQLFVPGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDIKRIFKXXXX 195 M+Y GPGR+ LFVPGPVN+PE V+RAMNRNNEDYRSPA+P L+K++LED+K+IFK Sbjct: 1 MDYMYGPGRHHLFVPGPVNIPEPVIRAMNRNNEDYRSPAIPALTKTLLEDVKKIFKTTSG 60
Query: 196 XXXXXXXXXXGAWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAG 375 GAWESALTNTLSP D+I++F +GQFSLLW+DQ +RLNF+VDVV+ +WG G Sbjct: 61 TPFLFPTTGTGAWESALTNTLSPGDRIVSFLIGQFSLLWIDQQKRLNFNVDVVESDWGQG 120
Query: 376 VDLSVLLAKLQSDTKHEIKAVCVVHNETATGVTNDLAGIRNVIDACQHPALFLVDGVSSI 555 +L VL +KL D H IKA+C+VHNETATGVTND++ +R ++D +HPAL LVDGVSSI Sbjct: 121 ANLQVLASKLSQDENHTIKAICIVHNETATGVTNDISAVRTLLDHYKHPALLLVDGVSSI 180
Query: 556 CALDFRMDEWCIDVALTGSQKALSLPTGLGIVCASPKALE 675 CALDFRMDEW +DVALTGSQKALSLPTGLGIVCASPKALE Sbjct: 181 CALDFRMDEWGVDVALTGSQKALSLPTGLGIVCASPKALE 220
>sp|O08374|SGAA_HYPME Serine--glyoxylate aminotransferase OS=Hyphomicrobium methylovorum GN=sgaA PE=3 SV=2 Length = 405
Score = 220 bits (560), Expect = 6e-57 Identities = 109/209 (52%), Positives = 136/209 (65%) Frame = +1
Query: 49 LFVPGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDIKRIFKXXXXXXXXXXXXXXG 228 LF+PGP N+P+ V AMN ED RSP P + + ED+K+ FK G Sbjct: 7 LFIPGPTNIPDAVRMAMNIPMEDMRSPEFPKFTLPLFEDLKKAFKMKDGRVFIFPSSGTG 66
Query: 229 AWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAGVDLSVLLAKLQ 408 AWESA+ NTL+ DK+L R GQFSLLWVD +RL V+V D EWG GV + L Sbjct: 67 AWESAVENTLATGDKVLMSRFGQFSLLWVDMCERLGLKVEVCDEEWGTGVPVEKYADILA 126
Query: 409 SDTKHEIKAVCVVHNETATGVTNDLAGIRNVIDACQHPALFLVDGVSSICALDFRMDEWC 588 D HEIKAV V HNETATGV++D+AG+R +DA +HPAL +VDGVSS+ +LD RM EW Sbjct: 127 KDKNHEIKAVFVTHNETATGVSSDVAGVRKALDAAKHPALLMVDGVSSVGSLDMRMGEWG 186
Query: 589 IDVALTGSQKALSLPTGLGIVCASPKALE 675 +D ++GSQK LPTGLGI+ S KAL+ Sbjct: 187 VDCCVSGSQKGFMLPTGLGILAVSQKALD 215
>sp|P55819|SGAA_METEX Serine--glyoxylate aminotransferase OS=Methylobacterium extorquens GN=sgaA PE=3 SV=1 Length = 379
Score = 197 bits (500), Expect = 6e-50 Identities = 102/214 (47%), Positives = 129/214 (60%) Frame = +1
Query: 34 PGRNQLFVPGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDIKRIFKXXXXXXXXXX 213 PGRN LFVPGP N+P++V+RAM +ED+RS P+L+K + ED K++F Sbjct: 2 PGRNHLFVPGPTNIPDRVMRAMMVQSEDHRSVDFPSLTKPLFEDTKKVFGSTEGTIFLFP 61
Query: 214 XXXXGAWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAGVDLSVL 393 G WESAL+NTL+ DK+L R GQFS LW+D QRL DV V + EWG G + Sbjct: 62 ASGTGIWESALSNTLARGDKVLAARFGQFSHLWIDMAQRLGLDVVVQEEEWGTGAKPEKI 121
Query: 394 LAKLQSDTKHEIKAVCVVHNETATGVTNDLAGIRNVIDACQHPALFLVDGVSSICALDFR 573 L++D HEIKAV VVHNETATGVT+++ +R IDA HPAL V Sbjct: 122 EEALRADKNHEIKAVMVVHNETATGVTSNIGAVRKAIDAAGHPALLFV------------ 169
Query: 574 MDEWCIDVALTGSQKALSLPTGLGIVCASPKALE 675 D A+ GSQK L LP GLG++C S KAL+ Sbjct: 170 ------DCAIAGSQKGLMLPAGLGVICVSQKALK 197
>sp|P16421|DHSS_ANACY Soluble hydrogenase 42 kDa subunit OS=Anabaena cylindrica PE=1 SV=1 Length = 383
Score = 129 bits (323), Expect = 2e-29 Identities = 76/209 (36%), Positives = 111/209 (53%) Frame = +1
Query: 49 LFVPGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDIKRIFKXXXXXXXXXXXXXXG 228 L +PGP VPE L A+ ++ +R+ + V +++K + + G Sbjct: 7 LMIPGPTPVPEAALLALAKHPIGHRTSEFSNMMGEVTQNLKWLHQTESDVLMLNVSGT-G 65
Query: 229 AWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAGVDLSVLLAKLQ 408 A E+ + N LSP D+IL G+F WV+ Q +V+ + EWG +D KLQ Sbjct: 66 AVEAGMINFLSPGDRILVGSNGKFGERWVEVGQAFGLNVEAITAEWGQPLDPDKFAQKLQ 125
Query: 409 SDTKHEIKAVCVVHNETATGVTNDLAGIRNVIDACQHPALFLVDGVSSICALDFRMDEWC 588 +DT EIKAV + H+ET+TGV NDL I + + AL +VD V+S+ A + +D Sbjct: 126 ADTNKEIKAVIITHSETSTGVINDLVAINSHVKE-HGQALIIVDAVTSLGAYNVPVDALG 184
Query: 589 IDVALTGSQKALSLPTGLGIVCASPKALE 675 +DV +GSQK +P GLG V SPKA E Sbjct: 185 LDVVASGSQKGYMIPPGLGFVSVSPKAWE 213
>sp|P14776|DHSS_SYNP1 Soluble hydrogenase, small subunit OS=Synechococcus sp. (strain PCC 6716) PE=3 SV=1 Length = 384
Score = 105 bits (262), Expect = 2e-22 Identities = 67/209 (32%), Positives = 101/209 (48%) Frame = +1
Query: 49 LFVPGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDIKRIFKXXXXXXXXXXXXXXG 228 L +PGP VPE VL ++ ++ +RS + ++ IK + + G Sbjct: 7 LMIPGPTPVPESVLLSLGKHPIGHRSGEFSQIMAAMTAGIKWLHQTQNEVLILAASGT-G 65
Query: 229 AWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAGVDLSVLLAKLQ 408 A E+ + N LS D+++ G+F W + + + WG ++ A L Sbjct: 66 AMEAGIINFLSAGDRVVVGCNGKFGDRWGEVCDAYGLTTERISAPWGQPLNPDDFKAVLD 125
Query: 409 SDTKHEIKAVCVVHNETATGVTNDLAGIRNVIDACQHPALFLVDGVSSICALDFRMDEWC 588 + KAV V H+ET+TGV NDL I + A AL +VD V+S+ A+ +DEW Sbjct: 126 GHRQKPSKAVIVTHSETSTGVINDLEAINRHVKA-HGQALIIVDAVTSLGAVSVPIDEWG 184
Query: 589 IDVALTGSQKALSLPTGLGIVCASPKALE 675 +DV +GSQK +P GL V SPKA E Sbjct: 185 LDVVGSGSQKGYMIPPGLAFVSVSPKAWE 213
>sp|Q58369|Y959_METJA Uncharacterized aminotransferase MJ0959 OS=Methanocaldococcus jannaschii GN=MJ0959 PE=3 SV=1 Length = 385
Score = 102 bits (253), Expect = 2e-21 Identities = 68/209 (32%), Positives = 105/209 (50%) Frame = +1
Query: 49 LFVPGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDIKRIFKXXXXXXXXXXXXXXG 228 L +PGP VP +VL AM +R+ L + +E +K++F Sbjct: 10 LMIPGPTMVPPEVLNAMALPVIGHRTKDYSNLLEDTIEKLKKVF-ITENDTFLITGSGTA 68
Query: 229 AWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAGVDLSVLLAKLQ 408 A + A++N + DK+L G F + + ++ + +DVEWG + + L Sbjct: 69 AMDMAISNIIKRGDKVLNIVTGNFGERFANIVKAYKGEAIRLDVEWGDMAEPEAVKEIL- 127
Query: 409 SDTKHEIKAVCVVHNETATGVTNDLAGIRNVIDACQHPALFLVDGVSSICALDFRMDEWC 588 D +IKAV VVHNET+TG N + I V+ + AL++VD VSS+ +D++ Sbjct: 128 -DKYDDIKAVTVVHNETSTGARNPIKEIGEVVK--DYDALYIVDTVSSLGGDYVNVDKFH 184
Query: 589 IDVALTGSQKALSLPTGLGIVCASPKALE 675 ID+ +TGSQK L+ P GL + S KA E Sbjct: 185 IDICVTGSQKCLAAPPGLAAITVSEKAWE 213
>sp|O32148|PUCG_BACSU Purine catabolism protein pucG OS=Bacillus subtilis GN=pucG PE=2 SV=1 Length = 416
Score = 99.0 bits (245), Expect = 2e-20 Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 1/199 (0%) Frame = +1
Query: 49 LFVPGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDIKRIFKXXXXXXXXXXXXXXG 228 + PGPV V +VLR M+ PA + +E ++ +F+ Sbjct: 14 IMTPGPVEVDPRVLRVMSTPVVGQFDPAFTGIMNETMEMLRELFQTKNRWAYPIDGTSRA 73
Query: 229 AWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAGVDLSVLLAKLQ 408 E+ L + + P D +L G+F L + +R +V +++ EWG D ++ +++ Sbjct: 74 GIEAVLASVIEPEDDVLIPIYGRFGYLLTEIAERYGANVHMLECEWGTVFDPEDIIREIK 133
Query: 409 SDTKHEIKAVCVVHNETATGVTNDLAGIRNVIDACQ-HPALFLVDGVSSICALDFRMDEW 585 K + K V +VH ET+TG + L I +AC+ ALF+VD V++I + ++DEW Sbjct: 134 ---KVKPKIVAMVHGETSTGRIHPLKAIG---EACRTEDALFIVDAVATIGGCEVKVDEW 187
Query: 586 CIDVALTGSQKALSLPTGL 642 ID A+ G+QK LS+P+G+ Sbjct: 188 KIDAAIGGTQKCLSVPSGM 206
>sp|P43567|AGX1_YEAST Alanine--glyoxylate aminotransferase 1 OS=Saccharomyces cerevisiae GN=AGX1 PE=1 SV=1 Length = 385
Score = 91.7 bits (226), Expect = 3e-18 Identities = 63/216 (29%), Positives = 103/216 (47%), Gaps = 7/216 (3%) Frame = +1
Query: 49 LFVPGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDIKRIFKXXXXXXXXXXXXXXG 228 L +PGP+ + V +A++ + + SP ++ + VL++ + +FK Sbjct: 8 LLIPGPIILSGAVQKALDVPSLGHTSPEFVSIFQRVLKNTRAVFKSAAASKSQPFVLAGS 67
Query: 229 A---WESALTNTL---SPRDKILTFRLGQFSLLWVDQMQRLNFDVDVV-DVEWGAGVDLS 387 W+ +N + +P +L G FS + D ++ VDVV ++ G V L Sbjct: 68 GTLGWDIFASNFILSKAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPLKIGESVPLE 127
Query: 388 VLLAKLQSDTKHEIKAVCVVHNETATGVTNDLAGIRNVIDACQHPALFLVDGVSSICALD 567 ++ KL +++ AV V H +T+T V +DL I I F+VD V SI + Sbjct: 128 LITEKL---SQNSYGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEE 184
Query: 568 FRMDEWCIDVALTGSQKALSLPTGLGIVCASPKALE 675 F DEW +D ALT SQKA+ P GL I S + ++ Sbjct: 185 FEFDEWGVDFALTASQKAIGAPAGLSISLCSSRFMD 220
>sp|P21549|SPYA_HUMAN Serine--pyruvate aminotransferase OS=Homo sapiens GN=AGXT PE=1 SV=1 Length = 392
Score = 73.2 bits (178), Expect = 1e-12 Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 1/210 (0%) Frame = +1
Query: 43 NQLFV-PGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDIKRIFKXXXXXXXXXXXX 219 NQL + PGP N+P +++ A S M + + E I+ +F+ Sbjct: 22 NQLLLGPGPSNLPPRIMAAGGLQMIGSMSKDMYQIMDEIKEGIQYVFQTRNPLTLVISGS 81
Query: 220 XXGAWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAGVDLSVLLA 399 A E+AL N L P D L G + VD +R+ V + + G L + Sbjct: 82 GHCALEAALVNVLEPGDSFLVGANGIWGQRAVDIGERIGARVHPMTKDPGGHYTLQEVEE 141
Query: 400 KLQSDTKHEIKAVCVVHNETATGVTNDLAGIRNVIDACQHPALFLVDGVSSICALDFRMD 579 L +H+ + + H E++TGV L G + ++ L LVD V+S+ MD Sbjct: 142 GL---AQHKPVLLFLTHGESSTGVLQPLDGFGELCH--RYKCLLLVDSVASLGGTPLYMD 196
Query: 580 EWCIDVALTGSQKALSLPTGLGIVCASPKA 669 ID+ +GSQKAL+ P G ++ S KA Sbjct: 197 RQGIDILYSGSQKALNAPPGTSLISFSDKA 226
>sp|Q54GT6|SPYA_DICDI Serine--pyruvate aminotransferase OS=Dictyostelium discoideum GN=agxt PE=3 SV=1 Length = 407
Score = 70.5 bits (171), Expect = 8e-12 Identities = 49/198 (24%), Positives = 91/198 (45%) Frame = +1
Query: 49 LFVPGPVNVPEQVLRAMNRNNEDYRSPAMPTLSKSVLEDIKRIFKXXXXXXXXXXXXXXG 228 L PGP N+ +V + + + Y + + +E ++ +F+ Sbjct: 21 LLGPGPSNLHPRVNQQLISSMVGYTDASYYKVMDETMELMRYLFQTDNHFTIPISGAGTA 80
Query: 229 AWESALTNTLSPRDKILTFRLGQFSLLWVDQMQRLNFDVDVVDVEWGAGVDLSVLLAKLQ 408 A E+ ++N + P DK++ G FS R ++ VD +WG L + + L Sbjct: 81 AMETCVSNLIEPGDKVVCLVSGFFSDRIYQMAVRYGGNILKVDKQWGQWFALEEIESAL- 139
Query: 409 SDTKHEIKAVCVVHNETATGVTNDLAGIRNVIDACQHPALFLVDGVSSICALDFRMDEWC 588 +H+ + +V ET+TGV + G+ + ++ L +VD V+++ + +D+W Sbjct: 140 --VQHKPSLLTLVFGETSTGVKQQMEGVGELCK--KYNCLLMVDCVAALGGVPVFVDDWK 195
Query: 589 IDVALTGSQKALSLPTGL 642 ID TG+QK LS P G+ Sbjct: 196 IDACYTGTQKCLSGPPGI 213
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TY57 |
Definition |
tr|A9TY57|A9TY57_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
220 |
Score (bit) |
333.0 |
E-value |
6.0e-90 |
Report |
|