BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK957360|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0028_C15, 5'
         (716 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8N0Z3|CCD52_HUMAN Coiled-coil domain-containing protein 52 O...    33   2.0  
sp|Q5RBY6|CCD52_PONAB Coiled-coil domain-containing protein 52 O...    32   3.4  
sp|Q8C804|CCD52_MOUSE Coiled-coil domain-containing protein 52 O...    32   4.5  
sp|A2C3T6|SYC_PROM1 Cysteinyl-tRNA synthetase OS=Prochlorococcus...    31   5.9  
sp|Q5ZJY5|SMC5_CHICK Structural maintenance of chromosomes prote...    31   5.9  
sp|Q8N960|CE120_HUMAN Centrosomal protein of 120 kDa OS=Homo sap...    31   5.9  

>sp|Q8N0Z3|CCD52_HUMAN Coiled-coil domain-containing protein 52
           OS=Homo sapiens GN=CCDC52 PE=1 SV=1
          Length = 855

 Score = 32.7 bits (73), Expect = 2.0
 Identities = 34/123 (27%), Positives = 47/123 (38%), Gaps = 2/123 (1%)
 Frame = +2

Query: 20  SSAPKNEAPQPNNVASKQRFDKGFMCNLRKEHEFEEPEAVTGREYQPMQXXXXXXXXXXX 199
           SS     A  PN   S     K  +  +  EHE EE E  TGRE + +Q           
Sbjct: 314 SSGSTTSADLPNRTNSNLDVLKHMIHEV--EHEMEEYERWTGREVKGLQSSQGLTGFTLS 371

Query: 200 XQDEDC--VRTVSRKQFRCRQIRRDDSLDLEETILRTQREKSEQLLNTLQRLREETKTVA 373
                C  VR +   + + R  +  ++    E +L   RE  + L   + RLREE     
Sbjct: 372 LVSSLCRLVRYLKESEIQLR--KEVETRQQLEQVLGDHRELIDALTAEILRLREENAATQ 429

Query: 374 ASL 382
           A L
Sbjct: 430 ARL 432


>sp|Q5RBY6|CCD52_PONAB Coiled-coil domain-containing protein 52
           OS=Pongo abelii GN=CCDC52 PE=2 SV=1
          Length = 855

 Score = 32.0 bits (71), Expect = 3.4
 Identities = 27/93 (29%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
 Frame = +2

Query: 110 EHEFEEPEAVTGREYQPMQXXXXXXXXXXXXQDEDC--VRTVSRKQFRCRQIRRDDSLDL 283
           EHE EE E  TGRE + +Q                C  VR +   + + R  +  ++   
Sbjct: 342 EHEMEEYERWTGREVKGLQSSQGLTGFTLSLVSSLCRLVRYLKESEIQLR--KEVETRQQ 399

Query: 284 EETILRTQREKSEQLLNTLQRLREETKTVAASL 382
            E +L   RE  + L   + RLREE     A L
Sbjct: 400 LEQVLGDHRELIDALTAEILRLREENAATQARL 432


>sp|Q8C804|CCD52_MOUSE Coiled-coil domain-containing protein 52
           OS=Mus musculus GN=Ccdc52 PE=2 SV=2
          Length = 860

 Score = 31.6 bits (70), Expect = 4.5
 Identities = 27/93 (29%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
 Frame = +2

Query: 110 EHEFEEPEAVTGREYQPMQXXXXXXXXXXXXQDEDC--VRTVSRKQFRCRQIRRDDSLDL 283
           EHE EE E  TGRE   +Q                C  VR +   + + R  +  ++   
Sbjct: 344 EHEMEEYERCTGREVTGLQGGQGLTGFTLSLVSSLCRLVRYLKESEIQLR--KEVETRQQ 401

Query: 284 EETILRTQREKSEQLLNTLQRLREETKTVAASL 382
            E +L   RE  + L   +  LREE  T+ A L
Sbjct: 402 LEQMLGDHRELIDALTAEILSLREENSTMQARL 434


>sp|A2C3T6|SYC_PROM1 Cysteinyl-tRNA synthetase OS=Prochlorococcus
           marinus (strain NATL1A) GN=cysS PE=3 SV=1
          Length = 500

 Score = 31.2 bits (69), Expect = 5.9
 Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
 Frame = +3

Query: 75  DLTRDLCAISGRNMNL--KNPKQSREGNTNQCKKVKKRNLLEVEDKMKIVSGLFRE--SN 242
           +L  +L A+ G  +NL  +NPK + E +TN+ +++ K+  L   +K  +++   R+   N
Sbjct: 421 ELLSELAAVLGLKVNLNHENPKNNPELDTNKIEELIKKRSLAKANKDFLLADKIRDDFKN 480

Query: 243 FGVD 254
            G+D
Sbjct: 481 IGID 484


>sp|Q5ZJY5|SMC5_CHICK Structural maintenance of chromosomes protein
           5 OS=Gallus gallus GN=SMC5 PE=2 SV=1
          Length = 1065

 Score = 31.2 bits (69), Expect = 5.9
 Identities = 18/64 (28%), Positives = 34/64 (53%)
 Frame = +3

Query: 15  RVQVHRRMKHLSQITLPPSKDLTRDLCAISGRNMNLKNPKQSREGNTNQCKKVKKRNLLE 194
           R Q    +K+L ++  P +K +       +  NM +KN     +G + +CK  +K++ LE
Sbjct: 268 RDQAKEELKNLKEMQSPLTKKIRECEEFYNSLNMKIKNTADEIKGVSQKCK--EKQDALE 325

Query: 195 VEDK 206
           ++DK
Sbjct: 326 MKDK 329


>sp|Q8N960|CE120_HUMAN Centrosomal protein of 120 kDa OS=Homo sapiens
            GN=CCDC100 PE=2 SV=2
          Length = 986

 Score = 31.2 bits (69), Expect = 5.9
 Identities = 20/88 (22%), Positives = 40/88 (45%)
 Frame = +2

Query: 203  QDEDCVRTVSRKQFRCRQIRRDDSLDLEETILRTQREKSEQLLNTLQRLREETKTVAASL 382
            + E  +  + ++Q    Q+R       E+  ++T+R++   + N L RLR++ +      
Sbjct: 862  EQESQMARLKKQQEELEQMRLRYLAAEEKDTVKTERQELLDIRNELNRLRQQEQKQYQDS 921

Query: 383  NHLRSGCS*G*HHSINEDNFSHLHTRSV 466
              + SG   G H S+ E+      TR +
Sbjct: 922  TEIASGKKDGPHGSVLEEGLDDYLTRLI 949

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK957360|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0028_C15, 5'
         (716 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TNB7|A9TNB7_PHYPA Predicted protein OS=Physcomitrella paten...    37   1.7  
tr|A7I0N6|A7I0N6_CAMHC Putative Cell division protease FtsH-like...    35   3.7  
tr|Q4UJ27|Q4UJ27_THEAN Putative uncharacterized protein OS=Theil...    35   6.4  

>tr|A9TNB7|A9TNB7_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_171028 PE=4 SV=1
          Length = 702

 Score = 36.6 bits (83), Expect = 1.7
 Identities = 19/39 (48%), Positives = 26/39 (66%)
 Frame = +2

Query: 278 DLEETILRTQREKSEQLLNTLQRLREETKTVAASLNHLR 394
           +LE+      ++K+E +   LQRLR E KTVAASL+ LR
Sbjct: 598 ELEQLQDMEHQQKTEAITGILQRLRAEAKTVAASLDQLR 636


>tr|A7I0N6|A7I0N6_CAMHC Putative Cell division protease FtsH-like
           protein OS=Campylobacter hominis (strain ATCC BAA-381 /
           LMG 19568 / NCTC 13146 / CH001A) GN=CHAB381_0489 PE=4
           SV=1
          Length = 643

 Score = 35.4 bits (80), Expect = 3.7
 Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
 Frame = +3

Query: 96  AISGRNMNLKNPKQSREGNTNQCKKVKKRNLLEVEDKMKIVSGLFRESNFGVD--KSVEM 269
           ++S  ++   N K    G T   KKV   +L+++ D+ KI  G + ESNF  D   S  +
Sbjct: 74  SVSMVSIGQTNIKAQSNGTTYIAKKVSDNDLVKILDEKKIPYGAYNESNFFTDILFSWVI 133

Query: 270 TVLIWKRRFCELRGRNRNNFSTPCNGFGKRQKL 368
            + I+   +  L  R + N S    G G  +KL
Sbjct: 134 PLAIFFGIWMFLVNRMQKNVSGGILGIGSSKKL 166


>tr|Q4UJ27|Q4UJ27_THEAN Putative uncharacterized protein
           OS=Theileria annulata GN=TA09580 PE=4 SV=1
          Length = 286

 Score = 34.7 bits (78), Expect = 6.4
 Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 10/107 (9%)
 Frame = +3

Query: 78  LTRDLCAISGRNMNLKNPKQSREGNTNQCKKVKKRN----LLEVEDKMKIVSGLFRESNF 245
           L+  +  ++ + ++++N  +++    N  K ++K N    +LE   + KI +G+  E+NF
Sbjct: 152 LSNQINQLNTQKLDMRNELENQSNGINLEKNLQKLNSEKKILENNFEEKIPNGINLENNF 211

Query: 246 ------GVDKSVEMTVLIWKRRFCELRGRNRNNFSTPCNGFGKRQKL 368
                 G+D    + VL WKR+     G   N+     N     QKL
Sbjct: 212 EEKIPNGLDIKNNLNVLNWKRKIILFFGIQNNSTFIYKNELENYQKL 258