DK957373 |
Clone id |
TST39A01NGRL0028_D04 |
Library |
TST39 |
Length |
652 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0028_D04. 5' end sequence. |
Accession |
DK957373 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL831Contig1 |
Sequence |
CACACACACACGCAGATCCACACACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCC CCCCCCTTCCGCCCCTCCCCTCTTCCTGCACCCACAATGGCGACGCCTTTGACCATCAGA TCCTTTCGCGGCGGGCAGCAATCCAACAGAGGCGGCGAATTTGGGCGATGGGCTGCAGCG AGCAACAGATCCTCCTCAGCAACCTGTACATACGCTTACTTGGGCTCCTCGCCCTCCTCA TCTCCCCCCTCCAGGGGGCCCTACCTCACCCTTGGCCTAACCTCAGATGCCTCCATGCAT GACATCAAGAAGGCCTACCGCCGCCTGGCTTTGAAGTATCATCCTGATGTGTGCAAAGGC GATTCTTGCTCAAACAAATTTATGCAGATTAATGATGCGTATGAGACAGTAATGGGTTTT TTTGGAAGGCAATAACAATGCGGTCCAGCAATACTCAGCGGACTCGATGGCACCGGAGCC GATGATGGGAGTGTACGACGAGTCATGGGATGAGTGGGAGGAGTGGATGGGATGGGAAGG AGCAGGGACAAGAGACTACTCCACCCATGTTAACCACTCATTGTAGAGTTACAAACACTA TACTCAAATTGAAAAAAAAAAGGGGGCCTCTATTAAAGCTTATGCAAATTTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SAG8 |
Definition |
sp|Q9SAG8|DNAJ8_ARATH Chaperone protein dnaJ 8, chloroplastic OS=Arabidopsis thaliana |
Align length |
52 |
Score (bit) |
66.6 |
E-value |
1.0e-10 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9T3J5 |
Definition |
tr|A9T3J5|A9T3J5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
54 |
Score (bit) |
83.2 |
E-value |
1.0e-15 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957373|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0028_D04, 5' (652 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9T3J5|A9T3J5_PHYPA Predicted protein OS=Physcomitrella paten... 83 1e-15 tr|A9SRX0|A9SRX0_PHYPA Predicted protein OS=Physcomitrella paten... 80 1e-14 tr|A9TGW3|A9TGW3_PHYPA Predicted protein OS=Physcomitrella paten... 78 4e-14 tr|A9PJX0|A9PJX0_POPJC Putative uncharacterized protein OS=Popul... 70 2e-12 tr|A9RY40|A9RY40_PHYPA Predicted protein OS=Physcomitrella paten... 76 2e-12 tr|A9TX17|A9TX17_PHYPA Predicted protein OS=Physcomitrella paten... 70 4e-12 tr|Q2L989|Q2L989_CAMSI Putative DnaJ protein OS=Camellia sinensi... 66 1e-11 tr|A7QFY4|A7QFY4_VITVI Chromosome chr9 scaffold_90, whole genome... 70 1e-11 tr|A9SSC7|A9SSC7_PHYPA Predicted protein OS=Physcomitrella paten... 73 2e-11 tr|A9NS05|A9NS05_PICSI Putative uncharacterized protein OS=Picea... 72 2e-11 tr|A9SPB6|A9SPB6_PHYPA Predicted protein OS=Physcomitrella paten... 69 6e-11 tr|Q0WYU9|Q0WYU9_IPOBA JA-domain OS=Ipomoea batatas GN=IbJ8 PE=2... 69 3e-10 tr|Q6V8R2|Q6V8R2_MALDO Putative DnaJ protein (Fragment) OS=Malus... 68 4e-10 tr|A6Q3K6|A6Q3K6_NITSB Co-chaperone-curved DNA binding protein A... 68 6e-10 tr|Q2HS35|Q2HS35_MEDTR Heat shock protein DnaJ OS=Medicago trunc... 67 7e-10 tr|B7FGQ7|B7FGQ7_MEDTR Putative uncharacterized protein OS=Medic... 65 4e-09 tr|B7FGF7|B7FGF7_MEDTR Putative uncharacterized protein OS=Medic... 65 4e-09 tr|B7FF77|B7FF77_MEDTR Putative uncharacterized protein OS=Medic... 65 4e-09 tr|A9RMI8|A9RMI8_PHYPA Predicted protein OS=Physcomitrella paten... 65 5e-09 tr|A9RMI4|A9RMI4_PHYPA Predicted protein OS=Physcomitrella paten... 65 5e-09 tr|A6DEH1|A6DEH1_9PROT Heat shock protein DnaJ-like protein OS=C... 64 1e-08 tr|A8IHL1|A8IHL1_CHLRE DnaJ-like protein OS=Chlamydomonas reinha... 62 2e-08 tr|B4YYB8|B4YYB8_THEHA ST240 (Fragment) OS=Thellungiella halophi... 62 3e-08 tr|A7I1Z6|A7I1Z6_CAMHC Co-chaperone protein DnaJ OS=Campylobacte... 62 4e-08 tr|B6TF62|B6TF62_MAIZE Heat shock protein DnaJ, N-terminal OS=Ze... 62 4e-08 tr|B4FMA5|B4FMA5_MAIZE Putative uncharacterized protein OS=Zea m... 62 4e-08 tr|A6QAK3|A6QAK3_SULNB Co-chaperone-curved DNA binding protein A... 61 5e-08 tr|A8REN0|A8REN0_9FIRM Putative uncharacterized protein OS=Eubac... 61 5e-08 tr|A9NKG4|A9NKG4_PICSI Putative uncharacterized protein OS=Picea... 61 5e-08 tr|B2G6W4|B2G6W4_LACRJ Chaperone protein DnaJ OS=Lactobacillus r... 60 9e-08
>tr|A9T3J5|A9T3J5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_167873 PE=4 SV=1 Length = 162
Score = 83.2 bits (204), Expect(2) = 1e-15 Identities = 35/54 (64%), Positives = 46/54 (85%) Frame = +1
Query: 253 RGPYLTLGLTSDASMHDIKKAYRRLALKYHPDVCKGDSCSNKFMQINDAYETVM 414 + PY TLG++ DA+ H+IKKAYRRLALKYHPDVC+G+ C++ F QIN AYET++ Sbjct: 55 KDPYSTLGVSPDATKHEIKKAYRRLALKYHPDVCEGNFCTSSFQQINQAYETLL 108
Score = 23.5 bits (49), Expect(2) = 1e-15 Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 4/54 (7%) Frame = +2
Query: 434 NNAVQQYSA--DSMAP--EPMMGVYXXXXXXXXXXXXXXXAGTRDYSTHVNHSL 583 NN Q+ D ++ E MGV AGT D+S HVN +L Sbjct: 109 NNTTSQFGQFEDDLSDNLEGFMGVEGDSWEDWEEWMGFEGAGTLDFSNHVNMNL 162
>tr|A9SRX0|A9SRX0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_134271 PE=4 SV=1 Length = 118
Score = 79.7 bits (195), Expect(2) = 1e-14 Identities = 35/54 (64%), Positives = 43/54 (79%) Frame = +1
Query: 253 RGPYLTLGLTSDASMHDIKKAYRRLALKYHPDVCKGDSCSNKFMQINDAYETVM 414 + PY TLGL+ A+ H+IKKAYRRLALKYHPDVC+G+ C F QIN AYET++ Sbjct: 11 KDPYSTLGLSPGATKHEIKKAYRRLALKYHPDVCEGNLCITNFQQINHAYETLL 64
Score = 23.9 bits (50), Expect(2) = 1e-14 Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 4/54 (7%) Frame = +2
Query: 434 NNAVQQYSA--DSMAP--EPMMGVYXXXXXXXXXXXXXXXAGTRDYSTHVNHSL 583 NN+ Q+ D ++ E MGV AGT D+S HVN +L Sbjct: 65 NNSTSQFGQFEDDLSDNLEGFMGVEDDSWEDWEEWMGFEGAGTLDFSNHVNPNL 118
>tr|A9TGW3|A9TGW3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_145447 PE=4 SV=1 Length = 116
Score = 77.8 bits (190), Expect(2) = 4e-14 Identities = 35/60 (58%), Positives = 43/60 (71%) Frame = +1
Query: 253 RGPYLTLGLTSDASMHDIKKAYRRLALKYHPDVCKGDSCSNKFMQINDAYETVMGFFGRQ 432 R P+ TLG+ AS H+IKKAYRRLAL+YHPDVC G+ C+ F QIN AYET++ Q Sbjct: 9 RDPHATLGIEPGASKHEIKKAYRRLALQYHPDVCDGNHCTTNFQQINFAYETLLSMTNPQ 68
Score = 23.9 bits (50), Expect(2) = 4e-14 Identities = 8/13 (61%), Positives = 11/13 (84%) Frame = +2
Query: 542 AGTRDYSTHVNHS 580 AG RDYS H+N++ Sbjct: 103 AGIRDYSDHINYA 115
>tr|A9PJX0|A9PJX0_POPJC Putative uncharacterized protein OS=Populus jackii PE=2 SV=1 Length = 170
Score = 70.1 bits (170), Expect(2) = 2e-12 Identities = 30/52 (57%), Positives = 41/52 (78%) Frame = +1
Query: 259 PYLTLGLTSDASMHDIKKAYRRLALKYHPDVCKGDSCSNKFMQINDAYETVM 414 PY TL + DAS ++KKA+R+LAL+YHPDVC+G +C +F IN+AY+TVM Sbjct: 58 PYKTLRIQPDASESEVKKAFRQLALQYHPDVCRGSNCGVQFSLINEAYDTVM 109
Score = 26.2 bits (56), Expect(2) = 2e-12 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = +2
Query: 476 EPMMGVYXXXXXXXXXXXXXXXAGTRDYSTHVN 574 EPM G+ AG RDYS+HVN Sbjct: 135 EPMRGMNDTDWDMWEEWMGWEGAGIRDYSSHVN 167
>tr|A9RY40|A9RY40_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_161703 PE=4 SV=1 Length = 195
Score = 75.9 bits (185), Expect = 2e-12 Identities = 32/54 (59%), Positives = 42/54 (77%) Frame = +1
Query: 253 RGPYLTLGLTSDASMHDIKKAYRRLALKYHPDVCKGDSCSNKFMQINDAYETVM 414 + PY TLG++ A+ H+IKKAYRRLAL+YHPDVC G+ C+ F QIN AYE ++ Sbjct: 55 KDPYSTLGVSPGATKHEIKKAYRRLALQYHPDVCDGNHCTTSFQQINHAYEVLL 108
>tr|A9TX17|A9TX17_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_152095 PE=4 SV=1 Length = 116
Score = 70.1 bits (170), Expect(2) = 4e-12 Identities = 31/60 (51%), Positives = 41/60 (68%) Frame = +1
Query: 253 RGPYLTLGLTSDASMHDIKKAYRRLALKYHPDVCKGDSCSNKFMQINDAYETVMGFFGRQ 432 + P TLG+ AS H+IKK YRRLAL++HPDVC G+ C+ F +IN AYET++ Q Sbjct: 9 KDPQTTLGIEPCASKHEIKKVYRRLALQFHPDVCDGNHCTKNFQKINFAYETLLSMTSPQ 68
Score = 25.0 bits (53), Expect(2) = 4e-12 Identities = 8/12 (66%), Positives = 11/12 (91%) Frame = +2
Query: 545 GTRDYSTHVNHS 580 GTRDYS H+N++ Sbjct: 104 GTRDYSNHINYA 115
>tr|Q2L989|Q2L989_CAMSI Putative DnaJ protein OS=Camellia sinensis PE=2 SV=2 Length = 159
Score = 65.9 bits (159), Expect(2) = 1e-11 Identities = 28/52 (53%), Positives = 40/52 (76%) Frame = +1
Query: 259 PYLTLGLTSDASMHDIKKAYRRLALKYHPDVCKGDSCSNKFMQINDAYETVM 414 PY TL + AS ++KKA+R+LAL+YHPDVC+G++C +F IN+AY+ VM Sbjct: 51 PYKTLRIQPGASESEVKKAFRQLALQYHPDVCRGNNCGVQFHHINEAYDIVM 102
Score = 27.3 bits (59), Expect(2) = 1e-11 Identities = 15/43 (34%), Positives = 19/43 (44%) Frame = +2
Query: 446 QQYSADSMAPEPMMGVYXXXXXXXXXXXXXXXAGTRDYSTHVN 574 + Y AD EPM G+ AG RDYS+H+N Sbjct: 118 ESYDAD----EPMRGMNDPDWDMWEEWMGWEGAGIRDYSSHIN 156
>tr|A7QFY4|A7QFY4_VITVI Chromosome chr9 scaffold_90, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00037613001 PE=4 SV=1 Length = 152
Score = 69.7 bits (169), Expect(2) = 1e-11 Identities = 31/55 (56%), Positives = 41/55 (74%) Frame = +1
Query: 259 PYLTLGLTSDASMHDIKKAYRRLALKYHPDVCKGDSCSNKFMQINDAYETVMGFF 423 PY TL + AS ++KKA+RRLAL+YHPDVC+G +C +F IN+AY+TVM F Sbjct: 47 PYKTLRIQPGASESEVKKAFRRLALQYHPDVCRGSNCGVQFHLINEAYDTVMSNF 101
Score = 23.5 bits (49), Expect(2) = 1e-11 Identities = 8/11 (72%), Positives = 10/11 (90%) Frame = +2
Query: 542 AGTRDYSTHVN 574 AG RDYS+H+N Sbjct: 139 AGIRDYSSHIN 149
>tr|A9SSC7|A9SSC7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_187874 PE=4 SV=1 Length = 116
Score = 72.8 bits (177), Expect = 2e-11 Identities = 33/54 (61%), Positives = 42/54 (77%) Frame = +1
Query: 253 RGPYLTLGLTSDASMHDIKKAYRRLALKYHPDVCKGDSCSNKFMQINDAYETVM 414 R + TLGL+ AS H+IKKAYRRLAL+YHPDVC G+ C+ F QIN AYE+++ Sbjct: 9 RDHHNTLGLSPGASKHEIKKAYRRLALQYHPDVCDGNHCTTNFQQINLAYESLL 62
>tr|A9NS05|A9NS05_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 148
Score = 72.4 bits (176), Expect = 2e-11 Identities = 33/51 (64%), Positives = 41/51 (80%) Frame = +1
Query: 262 YLTLGLTSDASMHDIKKAYRRLALKYHPDVCKGDSCSNKFMQINDAYETVM 414 Y TL L+ A+ D+KKAYRRLAL+YHPDVCKG++C +F +IN AYETVM Sbjct: 48 YETLRLSPGAAEKDVKKAYRRLALQYHPDVCKGNNCGPQFHKINQAYETVM 98
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