DK957394 |
Clone id |
TST39A01NGRL0028_E03 |
Library |
TST39 |
Length |
576 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0028_E03. 5' end sequence. |
Accession |
DK957394 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL3028Contig1 |
Sequence |
GTTGATTCATAAGAACAAATGGAGACCTTGATAAGGAAGCTGTGCTGTAGCGGAAGAGCT AATCACCCTGCACTGCACGTCCGCCCTCCCCGACCGCTCGCCTCGTGCTTCCCTGTCTTT AAATGGCCCCTCTCATCTCTAGCTCTCGCTTCTCACATGCCAACCAGGGCGCGGGCGCTG TCGTCTGAAAGTAGTCAATGCTCCCCCATTAAAGCTGTTCCTGTTCAAGTTGCTCACGAG CTCCTAAATGCAGGGCATCGGTACCTTGATGTCAGGACTGCTGAGGAATTTGCATCAGGT CACATAGAGGGTGCAGTGAATATTCCTTACATGTATAAAGTGGGTCCAGGTTTGACAAAG AACCTGAAGTTTCTGGAGGATGTAGAGACAAAGTTTGGCAAAGATGATGAAATTGTGGTG GGTTGTCAGATGGGAAAGCGATCCCAGATGGCAGCAGAAGAACTAGTTGCCGCGGCATAT ACAGGAATCACTGACATGGCTGGTGGATATATGGCATGGATGCGAAGTGGAATGCCAACT GAAACAAGTGTATGATGGAACTGTTCACTAAAAGTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P27626 |
Definition |
sp|P27626|DIN1_RAPSA Senescence-associated protein DIN1 OS=Raphanus sativus |
Align length |
127 |
Score (bit) |
133.0 |
E-value |
7.0e-31 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RB00 |
Definition |
tr|A9RB00|A9RB00_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
114 |
Score (bit) |
167.0 |
E-value |
5.0e-40 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957394|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0028_E03, 5' (576 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RB00|A9RB00_PHYPA Predicted protein OS=Physcomitrella paten... 167 5e-40 tr|A9SIC2|A9SIC2_PHYPA Predicted protein OS=Physcomitrella paten... 165 2e-39 tr|Q9MBD6|Q9MBD6_TOBAC Ntdin OS=Nicotiana tabacum GN=Ntdin PE=2 ... 164 3e-39 tr|Q45TE3|Q45TE3_TOBAC Senescence-associated protein OS=Nicotian... 163 6e-39 tr|B7FGV4|B7FGV4_MEDTR Putative uncharacterized protein OS=Medic... 163 7e-39 tr|B2C7Y6|B2C7Y6_NICBE Chloroplast N receptor-interacting protei... 157 3e-37 tr|Q5Z985|Q5Z985_ORYSJ Putative Ntdin OS=Oryza sativa subsp. jap... 156 7e-37 tr|Q5Z984|Q5Z984_ORYSJ Os06g0725000 protein OS=Oryza sativa subs... 156 7e-37 tr|B8B2K3|B8B2K3_ORYSI Putative uncharacterized protein OS=Oryza... 156 7e-37 tr|A3BFI8|A3BFI8_ORYSJ Putative uncharacterized protein OS=Oryza... 154 4e-36 tr|B6U016|B6U016_MAIZE Senescence-associated protein DIN1 OS=Zea... 153 8e-36 tr|A9NKQ8|A9NKQ8_PICSI Putative uncharacterized protein OS=Picea... 151 3e-35 tr|Q2TN72|Q2TN72_WHEAT Senescence-associated protein OS=Triticum... 147 4e-34 tr|Q9M4Y8|Q9M4Y8_CUCSA OP1 OS=Cucumis sativus PE=2 SV=1 146 9e-34 tr|O04410|O04410_RAPSA Din1 OS=Raphanus sativus GN=din1 PE=2 SV=1 135 1e-30 tr|A5C1X2|A5C1X2_VITVI Putative uncharacterized protein OS=Vitis... 134 3e-30 tr|Q8LEW3|Q8LEW3_ARATH Senescence-associated protein sen1 OS=Ara... 131 2e-29 tr|Q38853|Q38853_ARATH Senescence-associated protein (AT4g35770/... 131 2e-29 tr|Q38852|Q38852_ARATH Senescence-associated protein OS=Arabidop... 129 1e-28 tr|A7R2R5|A7R2R5_VITVI Chromosome chr4 scaffold_443, whole genom... 119 2e-25 tr|B6UI10|B6UI10_MAIZE Senescence-associated protein DIN1 OS=Zea... 118 2e-25 tr|B6TZV9|B6TZV9_MAIZE Senescence-associated protein DIN1 OS=Zea... 116 8e-25 tr|Q0JEL3|Q0JEL3_ORYSJ Os04g0249600 protein (Fragment) OS=Oryza ... 112 1e-23 tr|Q9FKW8|Q9FKW8_ARATH Senescence-associated protein sen1-like p... 110 7e-23 tr|A7QDW2|A7QDW2_VITVI Chromosome chr4 scaffold_83, whole genome... 110 7e-23 tr|Q8LCX9|Q8LCX9_ARATH Senescence-associated protein OS=Arabidop... 108 2e-22 tr|Q6YU82|Q6YU82_ORYSJ cDNA clone:J013095M22, full insert sequen... 108 2e-22 tr|Q0E4S8|Q0E4S8_ORYSJ Os02g0102300 protein OS=Oryza sativa subs... 108 2e-22 tr|B8AGV2|B8AGV2_ORYSI Putative uncharacterized protein OS=Oryza... 108 2e-22 tr|Q2V2U4|Q2V2U4_ARATH Uncharacterized protein At5g66170.2 OS=Ar... 105 2e-21
>tr|A9RB00|A9RB00_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_111073 PE=4 SV=1 Length = 129
Score = 167 bits (422), Expect = 5e-40 Identities = 74/114 (64%), Positives = 94/114 (82%) Frame = +1
Query: 208 IKAVPVQVAHELLNAGHRYLDVRTAEEFASGHIEGAVNIPYMYKVGPGLTKNLKFLEDVE 387 +++VPVQVAHE++NAGHR LDVRT EE+ +GH+EGA+NIPY+ K GPG+ KN +FLE+VE Sbjct: 7 LRSVPVQVAHEMMNAGHRCLDVRTQEEYLAGHVEGAINIPYLVKCGPGMKKNHRFLEEVE 66
Query: 388 TKFGKDDEIVVGCQMGKRSQMAAEELVAAAYTGITDMAGGYMAWMRSGMPTETS 549 +FGKD EI+VGCQ G+RS MAA EL AA + G+TDM GGY+AW SG+P E S Sbjct: 67 AEFGKDAEIIVGCQSGRRSMMAAAELQAANFNGVTDMGGGYVAWKESGLPVEVS 120
>tr|A9SIC2|A9SIC2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_185246 PE=4 SV=1 Length = 192
Score = 165 bits (417), Expect = 2e-39 Identities = 83/148 (56%), Positives = 109/148 (73%), Gaps = 2/148 (1%) Frame = +1
Query: 100 ASCFPVF--KWPLSSLALASHMPTRARALSSESSQCSPIKAVPVQVAHELLNAGHRYLDV 273 ASC + K SS + ++PTR ++++ ++ S IK+VPVQVAHELLNAGHR LDV Sbjct: 39 ASCSALLRRKTQHSSTMKSFNVPTRLY-ITAKQNETSTIKSVPVQVAHELLNAGHRCLDV 97
Query: 274 RTAEEFASGHIEGAVNIPYMYKVGPGLTKNLKFLEDVETKFGKDDEIVVGCQMGKRSQMA 453 RT EEF +GH++GAVNIPY+ K G G++KN KFL +VE F KDDEI++GCQ G+RS MA Sbjct: 98 RTTEEFTAGHVKGAVNIPYLIKTGHGMSKNPKFLAEVEKGFSKDDEILIGCQSGRRSLMA 157
Query: 454 AEELVAAAYTGITDMAGGYMAWMRSGMP 537 A EL A +TG+ DM GGY+AW +G+P Sbjct: 158 AAELRDAKFTGVIDMGGGYLAWKENGLP 185
>tr|Q9MBD6|Q9MBD6_TOBAC Ntdin OS=Nicotiana tabacum GN=Ntdin PE=2 SV=1 Length = 185
Score = 164 bits (415), Expect = 3e-39 Identities = 77/125 (61%), Positives = 99/125 (79%), Gaps = 1/125 (0%) Frame = +1
Query: 175 ALSSESSQCSPIK-AVPVQVAHELLNAGHRYLDVRTAEEFASGHIEGAVNIPYMYKVGPG 351 A E Q S + +VPV+VA ELL AGHRYLDVRTAEEF+ GH GA+NIPYM+++G G Sbjct: 61 ATVGEKVQVSTVPTSVPVRVALELLQAGHRYLDVRTAEEFSDGHAPGAINIPYMFRIGSG 120
Query: 352 LTKNLKFLEDVETKFGKDDEIVVGCQMGKRSQMAAEELVAAAYTGITDMAGGYMAWMRSG 531 +TKN FLE+V +FGKDDEI+VGCQ+GKRS MA +L+AA +TG+TD+AGGY AW +G Sbjct: 121 MTKNPNFLEEVLERFGKDDEIIVGCQLGKRSFMATSDLLAAGFTGVTDIAGGYAAWTENG 180
Query: 532 MPTET 546 +PT++ Sbjct: 181 LPTDS 185
>tr|Q45TE3|Q45TE3_TOBAC Senescence-associated protein OS=Nicotiana tabacum GN=didiA9 PE=2 SV=1 Length = 185
Score = 163 bits (413), Expect = 6e-39 Identities = 78/125 (62%), Positives = 98/125 (78%), Gaps = 1/125 (0%) Frame = +1
Query: 175 ALSSESSQCSPIK-AVPVQVAHELLNAGHRYLDVRTAEEFASGHIEGAVNIPYMYKVGPG 351 A E Q S + +VPV+VA ELL AGHRYLDVRTAEEF+ GH GA+NIPYM+++G G Sbjct: 61 ATVGEKVQVSTVPTSVPVRVALELLQAGHRYLDVRTAEEFSDGHATGAINIPYMFRIGSG 120
Query: 352 LTKNLKFLEDVETKFGKDDEIVVGCQMGKRSQMAAEELVAAAYTGITDMAGGYMAWMRSG 531 +TKN FLE V FGKDDEI+VGCQ+GKRS MAA +L+AA +TG+TD+AGGY AW +G Sbjct: 121 MTKNPNFLEQVLKHFGKDDEIIVGCQLGKRSFMAATDLLAAGFTGVTDIAGGYAAWTENG 180
Query: 532 MPTET 546 +PT++ Sbjct: 181 LPTDS 185
>tr|B7FGV4|B7FGV4_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 185
Score = 163 bits (412), Expect = 7e-39 Identities = 72/110 (65%), Positives = 94/110 (85%) Frame = +1
Query: 214 AVPVQVAHELLNAGHRYLDVRTAEEFASGHIEGAVNIPYMYKVGPGLTKNLKFLEDVETK 393 +VPV+VAHELL AGH+YLDVRT EEF +GH GA+NIPYMYKVG G+TKN F+++V + Sbjct: 75 SVPVRVAHELLLAGHKYLDVRTTEEFNAGHAPGAINIPYMYKVGSGMTKNSNFVKEVSSH 134
Query: 394 FGKDDEIVVGCQMGKRSQMAAEELVAAAYTGITDMAGGYMAWMRSGMPTE 543 F K+DE++VGCQ+GKRS MAA +L+AA +TG+TD+AGGY AW ++G+PTE Sbjct: 135 FRKEDEVIVGCQLGKRSMMAATDLLAAGFTGLTDIAGGYAAWTQNGLPTE 184
>tr|B2C7Y6|B2C7Y6_NICBE Chloroplast N receptor-interacting protein 1 OS=Nicotiana benthamiana GN=NRIP1 PE=2 SV=1 Length = 185
Score = 157 bits (398), Expect = 3e-37 Identities = 75/125 (60%), Positives = 96/125 (76%), Gaps = 1/125 (0%) Frame = +1
Query: 175 ALSSESSQCSPIK-AVPVQVAHELLNAGHRYLDVRTAEEFASGHIEGAVNIPYMYKVGPG 351 A E Q S + +VPV+VA ELL AGHRYLDVRTAEEF+ GH GA+NIPYM+++G G Sbjct: 61 ATVGEKVQVSTVPTSVPVRVALELLQAGHRYLDVRTAEEFSDGHAPGAINIPYMFRIGSG 120
Query: 352 LTKNLKFLEDVETKFGKDDEIVVGCQMGKRSQMAAEELVAAAYTGITDMAGGYMAWMRSG 531 + KN F E V FGKDDEI+VGCQ+GKRS MAA +L+AA ++G+TD+AGGY AW +G Sbjct: 121 MIKNPNFAEQVLEHFGKDDEIIVGCQLGKRSFMAATDLLAAGFSGVTDIAGGYAAWTENG 180
Query: 532 MPTET 546 +PT++ Sbjct: 181 LPTDS 185
>tr|Q5Z985|Q5Z985_ORYSJ Putative Ntdin OS=Oryza sativa subsp. japonica GN=P0548E04.8-1 PE=4 SV=1 Length = 170
Score = 156 bits (395), Expect = 7e-37 Identities = 74/110 (67%), Positives = 86/110 (78%) Frame = +1
Query: 211 KAVPVQVAHELLNAGHRYLDVRTAEEFASGHIEGAVNIPYMYKVGPGLTKNLKFLEDVET 390 ++VPV+VAHEL AGHRYLDVRT EFA GH GAVNIPYMYK G GLTKN FLE V T Sbjct: 59 RSVPVRVAHELQQAGHRYLDVRTEGEFAGGHPVGAVNIPYMYKTGSGLTKNTHFLEKVST 118
Query: 391 KFGKDDEIVVGCQMGKRSQMAAEELVAAAYTGITDMAGGYMAWMRSGMPT 540 FGK+DEI+VGCQ GKRS MAA EL +A +T +TD+AGG+ AW + +PT Sbjct: 119 TFGKEDEIIVGCQSGKRSLMAASELCSAGFTAVTDIAGGFSAWKENELPT 168
>tr|Q5Z984|Q5Z984_ORYSJ Os06g0725000 protein OS=Oryza sativa subsp. japonica GN=P0548E04.8-2 PE=4 SV=1 Length = 116
Score = 156 bits (395), Expect = 7e-37 Identities = 74/110 (67%), Positives = 86/110 (78%) Frame = +1
Query: 211 KAVPVQVAHELLNAGHRYLDVRTAEEFASGHIEGAVNIPYMYKVGPGLTKNLKFLEDVET 390 ++VPV+VAHEL AGHRYLDVRT EFA GH GAVNIPYMYK G GLTKN FLE V T Sbjct: 5 RSVPVRVAHELQQAGHRYLDVRTEGEFAGGHPVGAVNIPYMYKTGSGLTKNTHFLEKVST 64
Query: 391 KFGKDDEIVVGCQMGKRSQMAAEELVAAAYTGITDMAGGYMAWMRSGMPT 540 FGK+DEI+VGCQ GKRS MAA EL +A +T +TD+AGG+ AW + +PT Sbjct: 65 TFGKEDEIIVGCQSGKRSLMAASELCSAGFTAVTDIAGGFSAWKENELPT 114
>tr|B8B2K3|B8B2K3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_24507 PE=4 SV=1 Length = 170
Score = 156 bits (395), Expect = 7e-37 Identities = 74/110 (67%), Positives = 86/110 (78%) Frame = +1
Query: 211 KAVPVQVAHELLNAGHRYLDVRTAEEFASGHIEGAVNIPYMYKVGPGLTKNLKFLEDVET 390 ++VPV+VAHEL AGHRYLDVRT EFA GH GAVNIPYMYK G GLTKN FLE V T Sbjct: 59 RSVPVRVAHELQQAGHRYLDVRTEGEFAGGHPVGAVNIPYMYKTGSGLTKNTHFLEKVST 118
Query: 391 KFGKDDEIVVGCQMGKRSQMAAEELVAAAYTGITDMAGGYMAWMRSGMPT 540 FGK+DEI+VGCQ GKRS MAA EL +A +T +TD+AGG+ AW + +PT Sbjct: 119 TFGKEDEIIVGCQSGKRSLMAASELCSAGFTAVTDIAGGFSAWKENELPT 168
>tr|A3BFI8|A3BFI8_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_021810 PE=4 SV=1 Length = 170
Score = 154 bits (388), Expect = 4e-36 Identities = 73/110 (66%), Positives = 86/110 (78%) Frame = +1
Query: 211 KAVPVQVAHELLNAGHRYLDVRTAEEFASGHIEGAVNIPYMYKVGPGLTKNLKFLEDVET 390 ++VPV+VAHEL AG+RYLDVRT EFA GH GAVNIPYMYK G GLTKN FLE V T Sbjct: 59 RSVPVRVAHELQQAGNRYLDVRTEGEFAGGHPVGAVNIPYMYKTGSGLTKNTHFLEKVST 118
Query: 391 KFGKDDEIVVGCQMGKRSQMAAEELVAAAYTGITDMAGGYMAWMRSGMPT 540 FGK+DEI+VGCQ GKRS MAA EL +A +T +TD+AGG+ AW + +PT Sbjct: 119 TFGKEDEIIVGCQSGKRSLMAASELCSAGFTAVTDIAGGFSAWKENELPT 168
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