DK957440 |
Clone id |
TST39A01NGRL0028_G02 |
Library |
TST39 |
Length |
567 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0028_G02. 5' end sequence. |
Accession |
DK957440 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL516Contig1 |
Sequence |
GACCAGCTTGAGCCTGGTTGTGCGATTCTCATGCATAACAAGGTTCTTTCTGTTGTTGGC CTTTTGCAAGACGAAGTCGATCCAATGGTTTCAGTGATGAAGGTGGAGAAGGCACCTTTG GAGTCGTATGCTGACATAGGAGGGCTTGATGCCCAAATACAAGAGATAAAGGAAGCAGTG GAGCTACCTTTGACACACCCTGAGTTGTATGAAGACATTGGCATAAAGCCACCAAAGGGT GTCATTTTGTATGGGGAGCCTGGCACTGGCAAGACATTACTGGCCAAGGCTGTTGCAAAT TCCACTTCTGCAACCTTTCTGCGTGTTGTCGGTAGTGAGCTTATTCAAAAATACTTGGGA GATGGACCGAAGCTGGTGCGAGAGCTTTTCAGAGTGGCAGATGATCTCTCTCCGTCAATT GTGTTCATAGATGAGATTGATGCAGTGGGCACAAAGCGTTATGATGCTCATTCAGGTGGA GAGCGAGAGATTCAACGAACTATGTTGGAGCTGCTCAATCAGCTTGATGGGTTTGATGCA CGAGGAGATGTGAAGGTTATTTTTGGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P46466 |
Definition |
sp|P46466|PRS4_ORYSJ 26S protease regulatory subunit 4 homolog OS=Oryza sativa subsp. japonica |
Align length |
187 |
Score (bit) |
361.0 |
E-value |
2.0e-99 |
Report |
 |
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LKT7 |
Definition |
tr|B8LKT7|B8LKT7_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
187 |
Score (bit) |
367.0 |
E-value |
1.0e-100 |
Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957440|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0028_G02, 5' (567 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LKT7|B8LKT7_PICSI Putative uncharacterized protein OS=Picea... 367 e-100 tr|Q2HTA3|Q2HTA3_MEDTR AAA ATPase; 26S proteasome subunit P45 OS... 365 e-100 tr|A5BEF3|A5BEF3_VITVI Putative uncharacterized protein (Chromos... 365 e-100 tr|Q8W422|Q8W422_ORYSJ Os03g0298400 protein OS=Oryza sativa subs... 363 3e-99 tr|B8A0A6|B8A0A6_MAIZE Putative uncharacterized protein OS=Zea m... 363 3e-99 tr|Q9SZD4|Q9SZD4_ARATH 26S proteasome subunit 4-like protein (26... 362 8e-99 tr|Q9SEI5|Q9SEI5_ARATH 26S proteasome AAA-ATPase subunit RPT2a O... 362 8e-99 tr|Q38JH4|Q38JH4_SOLTU 26S proteasome subunit 4-like OS=Solanum ... 361 1e-98 tr|Q0D3E0|Q0D3E0_ORYSJ Os07g0691800 protein OS=Oryza sativa subs... 361 2e-98 tr|A9SRU1|A9SRU1_PHYPA Predicted protein OS=Physcomitrella paten... 361 2e-98 tr|A9RJ42|A9RJ42_PHYPA Predicted protein OS=Physcomitrella paten... 361 2e-98 tr|A9REE1|A9REE1_PHYPA Predicted protein OS=Physcomitrella paten... 361 2e-98 tr|A2XWM3|A2XWM3_ORYSI Putative uncharacterized protein OS=Oryza... 361 2e-98 tr|B6T2S0|B6T2S0_MAIZE 26S protease regulatory subunit 4 OS=Zea ... 360 3e-98 tr|Q9SL67|Q9SL67_ARATH 26S proteasome subunit 4 OS=Arabidopsis t... 359 5e-98 tr|Q9FT10|Q9FT10_BRANA 26S proteasome subunit 4-like protein OS=... 359 5e-98 tr|Q94JT0|Q94JT0_ARATH At2g20140/T2G17.6 OS=Arabidopsis thaliana... 358 1e-97 tr|Q8LAV7|Q8LAV7_ARATH 26S proteasome subunit 4 OS=Arabidopsis t... 357 3e-97 tr|A3BNN9|A3BNN9_ORYSJ Putative uncharacterized protein OS=Oryza... 351 1e-95 tr|Q8W1R5|Q8W1R5_TORRU 26S proteasome regulatory subunit IV OS=T... 350 3e-95 tr|B8AM18|B8AM18_ORYSI Putative uncharacterized protein OS=Oryza... 346 5e-94 tr|A3AH16|A3AH16_ORYSJ Putative uncharacterized protein OS=Oryza... 346 5e-94 tr|A8IHB3|A8IHB3_CHLRE 26S proteasome regulatory subunit OS=Chla... 338 9e-92 tr|A4RUH0|A4RUH0_OSTLU Predicted protein OS=Ostreococcus lucimar... 332 1e-89 tr|B8BR56|B8BR56_THAPS 26S proteasome ATPase regulatory subunit ... 331 2e-89 tr|Q7RRF3|Q7RRF3_PLAYO 26S proteasome subunit 4-like protein OS=... 329 6e-89 tr|B3L3L7|B3L3L7_PLAKH 26S proteasome regulatory subunit 4, puta... 329 6e-89 tr|A5K7A5|A5K7A5_PLAVI 26S proteasome regulatory subunit 4, puta... 329 6e-89 tr|Q8IJW0|Q8IJW0_PLAF7 26S proteasome regulatory subunit 4, puta... 328 2e-88 tr|Q5CQD4|Q5CQD4_CRYPV 26S proteasome regulatory subunit S4 like... 325 8e-88
>tr|B8LKT7|B8LKT7_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 444
Score = 367 bits (941), Expect = e-100 Identities = 187/187 (100%), Positives = 187/187 (100%) Frame = +1
Query: 1 DQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAV 180 DQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAV Sbjct: 146 DQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAV 205
Query: 181 ELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLG 360 ELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLG Sbjct: 206 ELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLG 265
Query: 361 DGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDA 540 DGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDA Sbjct: 266 DGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDA 325
Query: 541 RGDVKVI 561 RGDVKVI Sbjct: 326 RGDVKVI 332
>tr|Q2HTA3|Q2HTA3_MEDTR AAA ATPase; 26S proteasome subunit P45 OS=Medicago truncatula GN=MtrDRAFT_AC150776g3v2 PE=3 SV=1 Length = 445
Score = 365 bits (938), Expect = e-100 Identities = 186/187 (99%), Positives = 187/187 (100%) Frame = +1
Query: 1 DQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAV 180 DQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAV Sbjct: 147 DQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAV 206
Query: 181 ELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLG 360 ELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLG Sbjct: 207 ELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLG 266
Query: 361 DGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDA 540 DGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFD+ Sbjct: 267 DGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDS 326
Query: 541 RGDVKVI 561 RGDVKVI Sbjct: 327 RGDVKVI 333
>tr|A5BEF3|A5BEF3_VITVI Putative uncharacterized protein (Chromosome undetermined scaffold_114, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00001228001 PE=3 SV=1 Length = 445
Score = 365 bits (938), Expect = e-100 Identities = 186/187 (99%), Positives = 187/187 (100%) Frame = +1
Query: 1 DQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAV 180 DQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAV Sbjct: 147 DQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAV 206
Query: 181 ELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLG 360 ELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLG Sbjct: 207 ELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLG 266
Query: 361 DGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDA 540 DGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFD+ Sbjct: 267 DGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDS 326
Query: 541 RGDVKVI 561 RGDVKVI Sbjct: 327 RGDVKVI 333
>tr|Q8W422|Q8W422_ORYSJ Os03g0298400 protein OS=Oryza sativa subsp. japonica GN=OsRPT2b PE=2 SV=1 Length = 450
Score = 363 bits (933), Expect = 3e-99 Identities = 184/187 (98%), Positives = 187/187 (100%) Frame = +1
Query: 1 DQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAV 180 DQLEPGCAILMHNKVLSVVG+LQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAV Sbjct: 152 DQLEPGCAILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAV 211
Query: 181 ELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLG 360 ELPLTHPELYEDIGI+PPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLG Sbjct: 212 ELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLG 271
Query: 361 DGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDA 540 DGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFD+ Sbjct: 272 DGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDS 331
Query: 541 RGDVKVI 561 RGDVKVI Sbjct: 332 RGDVKVI 338
>tr|B8A0A6|B8A0A6_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 446
Score = 363 bits (933), Expect = 3e-99 Identities = 184/187 (98%), Positives = 187/187 (100%) Frame = +1
Query: 1 DQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAV 180 DQLEPGCAILMHNKVLSVVG+LQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAV Sbjct: 148 DQLEPGCAILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAV 207
Query: 181 ELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLG 360 ELPLTHPELYEDIGI+PPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLG Sbjct: 208 ELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLG 267
Query: 361 DGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDA 540 DGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFD+ Sbjct: 268 DGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDS 327
Query: 541 RGDVKVI 561 RGDVKVI Sbjct: 328 RGDVKVI 334
>tr|Q9SZD4|Q9SZD4_ARATH 26S proteasome subunit 4-like protein (26S proteasome subunit AtRPT2a) OS=Arabidopsis thaliana GN=HLR PE=2 SV=1 Length = 443
Score = 362 bits (929), Expect = 8e-99 Identities = 183/187 (97%), Positives = 187/187 (100%) Frame = +1
Query: 1 DQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAV 180 DQLEPGC+ILMHNKVLSVVG+LQDEVDPMVSVMKVEKAPLESYADIGGL+AQIQEIKEAV Sbjct: 145 DQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAV 204
Query: 181 ELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLG 360 ELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLG Sbjct: 205 ELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLG 264
Query: 361 DGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDA 540 DGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFD+ Sbjct: 265 DGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDS 324
Query: 541 RGDVKVI 561 RGDVKVI Sbjct: 325 RGDVKVI 331
>tr|Q9SEI5|Q9SEI5_ARATH 26S proteasome AAA-ATPase subunit RPT2a OS=Arabidopsis thaliana GN=RPT2a PE=2 SV=1 Length = 443
Score = 362 bits (929), Expect = 8e-99 Identities = 183/187 (97%), Positives = 187/187 (100%) Frame = +1
Query: 1 DQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAV 180 DQLEPGC+ILMHNKVLSVVG+LQDEVDPMVSVMKVEKAPLESYADIGGL+AQIQEIKEAV Sbjct: 145 DQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAV 204
Query: 181 ELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLG 360 ELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLG Sbjct: 205 ELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLG 264
Query: 361 DGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDA 540 DGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFD+ Sbjct: 265 DGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDS 324
Query: 541 RGDVKVI 561 RGDVKVI Sbjct: 325 RGDVKVI 331
>tr|Q38JH4|Q38JH4_SOLTU 26S proteasome subunit 4-like OS=Solanum tuberosum PE=2 SV=1 Length = 444
Score = 361 bits (927), Expect = 1e-98 Identities = 184/187 (98%), Positives = 186/187 (99%) Frame = +1
Query: 1 DQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAV 180 DQLEPGCAILMHNKVLSVVGLLQD+VDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAV Sbjct: 146 DQLEPGCAILMHNKVLSVVGLLQDDVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAV 205
Query: 181 ELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLG 360 ELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLG Sbjct: 206 ELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLG 265
Query: 361 DGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDA 540 DGPKLVRELFRVADDLSPSIVFIDEIDAV TKRYDAHSGGEREIQRTMLELLNQLDGFD+ Sbjct: 266 DGPKLVRELFRVADDLSPSIVFIDEIDAVRTKRYDAHSGGEREIQRTMLELLNQLDGFDS 325
Query: 541 RGDVKVI 561 RGDVKVI Sbjct: 326 RGDVKVI 332
>tr|Q0D3E0|Q0D3E0_ORYSJ Os07g0691800 protein OS=Oryza sativa subsp. japonica GN=Os07g0691800 PE=2 SV=1 Length = 448
Score = 361 bits (926), Expect = 2e-98 Identities = 182/187 (97%), Positives = 187/187 (100%) Frame = +1
Query: 1 DQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAV 180 DQLEPGC+ILMHNKVLSVVG+LQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAV Sbjct: 150 DQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAV 209
Query: 181 ELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLG 360 ELPLTHPELYEDIGI+PPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLG Sbjct: 210 ELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLG 269
Query: 361 DGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDA 540 DGPKLVRELFRVAD+LSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFD+ Sbjct: 270 DGPKLVRELFRVADELSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDS 329
Query: 541 RGDVKVI 561 RGDVKVI Sbjct: 330 RGDVKVI 336
>tr|A9SRU1|A9SRU1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_233909 PE=3 SV=1 Length = 446
Score = 361 bits (926), Expect = 2e-98 Identities = 183/187 (97%), Positives = 186/187 (99%) Frame = +1
Query: 1 DQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAV 180 DQLEPGCAILMHNKVLSVVGLLQD+VDPMVSVMKVEKAPLESYADIGGLD QIQEIKEAV Sbjct: 148 DQLEPGCAILMHNKVLSVVGLLQDDVDPMVSVMKVEKAPLESYADIGGLDPQIQEIKEAV 207
Query: 181 ELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLG 360 ELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLG Sbjct: 208 ELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLG 267
Query: 361 DGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDA 540 DGPKLVRELFRVAD+LSP+IVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDA Sbjct: 268 DGPKLVRELFRVADELSPTIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDA 327
Query: 541 RGDVKVI 561 RGDVKVI Sbjct: 328 RGDVKVI 334
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