DK957452 |
Clone id |
TST39A01NGRL0028_G14 |
Library |
TST39 |
Length |
622 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0028_G14. 5' end sequence. |
Accession |
DK957452 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL21Contig1 |
Sequence |
AGCTTGTTCACAAGCACCGTCATACACACACATACAGGCCTCTAACACCCGCAGTGCAGG CCAGAGCTCCTCTGTCTTCTCCATCTCTCCTTTTTGAATCGTGCAGGAATGGCTAGCAAT GGAGTTGTGACTGTCTATGGCAATGGTGCCATCTCTGATCCCAAGAAGTCATCTTATGCA GTCAAGGTGGGTCTTGCTCAGATGCTCCGAGGAGGTGTTATTATGGATGTTGTGAATGCA GAGCAGGCTCGAATTGCGGAAGAGGCAGGCGCTACTGCCGTAATGGCCCTCGAACGTGTG CCTGCGGACATCAGGGCTGAGGGTGGTGTGGCTCGCATGAGTGATCCTGGTTTGATCAAG GAGATCAAGAATGCTGTCACTATTCCTGTGATGGCCAAAGCCAGAATTGGGCATTTTGTG GAAGCGCAGGTACTTGAGGCCATTGGTGTGGATTACATTGATGAGAGTGAGGTCCTTACC CCAGCGGATGATGTGAACCACATCAACAAGCACAACTTTCGTATTCCTTTTGTTTGTGGC TGCCGCAACCTAGGTGAAGCTTTAAGAAGGATTGCAGAGGGGGCTGCAATGATCAGGACC AAGGGAGAAGCAGGGACTGGCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9AT63 |
Definition |
sp|Q9AT63|PDX1_GINBI Probable pyridoxal biosynthesis protein PDX1 OS=Ginkgo biloba |
Align length |
171 |
Score (bit) |
315.0 |
E-value |
1.0e-85 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q45FF0 |
Definition |
tr|Q45FF0|Q45FF0_SOYBN Pyridoxine biosynthesis protein OS=Glycine max |
Align length |
170 |
Score (bit) |
294.0 |
E-value |
3.0e-78 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957452|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0028_G14, 5' (622 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q45FF0|Q45FF0_SOYBN Pyridoxine biosynthesis protein OS=Glycin... 294 3e-78 tr|Q6QND3|Q6QND3_TOBAC Putative pyridoxine biosynthesis protein ... 293 4e-78 tr|Q45FF1|Q45FF1_LOTJA Pyridoxine biosynthesis protein OS=Lotus ... 292 1e-77 tr|A9TIQ8|A9TIQ8_PHYPA Predicted protein OS=Physcomitrella paten... 291 2e-77 tr|A9S7G3|A9S7G3_PHYPA Predicted protein OS=Physcomitrella paten... 288 1e-76 tr|Q45FF2|Q45FF2_MEDTR Pyridoxine biosynthesis protein OS=Medica... 286 7e-76 tr|B6SJQ3|B6SJQ3_MAIZE Putative uncharacterized protein OS=Zea m... 283 8e-75 tr|A9RLD0|A9RLD0_PHYPA Predicted protein OS=Physcomitrella paten... 282 1e-74 tr|A9TWQ5|A9TWQ5_PHYPA Predicted protein OS=Physcomitrella paten... 281 2e-74 tr|B4FRZ2|B4FRZ2_MAIZE Putative uncharacterized protein OS=Zea m... 280 4e-74 tr|B4FQA2|B4FQA2_MAIZE Putative uncharacterized protein OS=Zea m... 280 4e-74 tr|Q53NW9|Q53NW9_ORYSJ Os11g0708500 protein OS=Oryza sativa subs... 278 1e-73 tr|B7E5L2|B7E5L2_ORYSJ cDNA clone:006-203-B11, full insert seque... 277 4e-73 tr|A2YH94|A2YH94_ORYSI Putative uncharacterized protein OS=Oryza... 277 4e-73 tr|Q3S861|Q3S861_WHEAT Pyridoxine biosynthesis protein OS=Tritic... 273 6e-72 tr|B7E4V8|B7E4V8_ORYSJ cDNA clone:001-007-G11, full insert seque... 268 1e-70 tr|Q4WUD7|Q4WUD7_ASPFU Pyridoxine biosynthesis protein OS=Asperg... 267 3e-70 tr|B0Y3W1|B0Y3W1_ASPFC Pyridoxine biosynthesis protein OS=Asperg... 267 3e-70 tr|A1DF23|A1DF23_NEOFI Pyridoxine biosynthesis protein OS=Neosar... 267 3e-70 tr|A2QGS0|A2QGS0_ASPNC Contig An03c0120, complete genome OS=Aspe... 266 7e-70 tr|Q0CDB7|Q0CDB7_ASPTN Pyridoxine biosynthesis protein PDX1 OS=A... 265 2e-69 tr|Q2U7S1|Q2U7S1_ASPOR Stationary phase-induced protein OS=Asper... 264 3e-69 tr|B8NEJ0|B8NEJ0_ASPFL Pyridoxine biosynthesis protein OS=Asperg... 264 3e-69 tr|A6R037|A6R037_AJECN Pyridoxal biosynthesis lyase pdxS OS=Ajel... 263 6e-69 tr|A1CAP7|A1CAP7_ASPCL Pyridoxine biosynthesis protein OS=Asperg... 263 6e-69 tr|B8G663|B8G663_9CHLR Pyridoxine biosynthesis protein OS=Chloro... 262 1e-68 tr|B2QH76|B2QH76_9CHLR Pyridoxine biosynthesis protein OS=Chloro... 262 1e-68 tr|A4RTQ1|A4RTQ1_OSTLU Predicted protein OS=Ostreococcus lucimar... 261 2e-68 tr|B6HQD1|B6HQD1_PENCH Pc22g15930 protein OS=Penicillium chrysog... 261 3e-68 tr|Q1DU32|Q1DU32_COCIM Putative uncharacterized protein OS=Cocci... 259 1e-67
>tr|Q45FF0|Q45FF0_SOYBN Pyridoxine biosynthesis protein OS=Glycine max PE=2 SV=1 Length = 311
Score = 294 bits (753), Expect = 3e-78 Identities = 148/170 (87%), Positives = 160/170 (94%) Frame = +1
Query: 112 ASNGVVTVYGNGAISDPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATAVMAL 291 + +GVVTVYGNGAI++ KKS ++VKVGLAQMLRGGVIMDVV+AEQARIAEEAGA AVMAL Sbjct: 4 SGSGVVTVYGNGAITETKKSPFSVKVGLAQMLRGGVIMDVVDAEQARIAEEAGACAVMAL 63
Query: 292 ERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVDYIDESE 471 ERVPADIRA+GGVARMSDP LI +IK AVTIPVMAKARIGHFVEAQ+LEAIG+DY+DESE Sbjct: 64 ERVPADIRAQGGVARMSDPQLINDIKRAVTIPVMAKARIGHFVEAQILEAIGIDYVDESE 123
Query: 472 VLTPADDVNHINKHNFRIPFVCGCRNLGEALRRIAEGAAMIRTKGEAGTG 621 VLT ADD NHINKHNFRIPFVCGCRNLGEALRRI EGAAMIRTKGEAGTG Sbjct: 124 VLTLADDANHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTG 173
>tr|Q6QND3|Q6QND3_TOBAC Putative pyridoxine biosynthesis protein isoform B (Putative pyridoxine biosynthesis protein isoform A) OS=Nicotiana tabacum GN=Pdx1-B PE=4 SV=1 Length = 309
Score = 293 bits (751), Expect = 4e-78 Identities = 150/172 (87%), Positives = 162/172 (94%), Gaps = 1/172 (0%) Frame = +1
Query: 109 MASNGVVTVYGNGAISDP-KKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATAVM 285 MA +GVVT+YGNGA+++ K+S ++VKVGLAQMLRGGVIMDVVNAEQARIAEEAGA AVM Sbjct: 1 MAGSGVVTLYGNGALTETTKQSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVM 60
Query: 286 ALERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVDYIDE 465 ALERVPADIRA+GGVARMSDP LIKEIK AVTIPVMAKARIGHFVEAQ+LEAIG+DY+DE Sbjct: 61 ALERVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDE 120
Query: 466 SEVLTPADDVNHINKHNFRIPFVCGCRNLGEALRRIAEGAAMIRTKGEAGTG 621 SEVLT ADD NHINKHNFRIPFVCGCRNLGEALRRI EGAAMIRTKGEAGTG Sbjct: 121 SEVLTLADDENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTG 172
>tr|Q45FF1|Q45FF1_LOTJA Pyridoxine biosynthesis protein OS=Lotus japonicus PE=2 SV=1 Length = 310
Score = 292 bits (747), Expect = 1e-77 Identities = 150/172 (87%), Positives = 161/172 (93%), Gaps = 1/172 (0%) Frame = +1
Query: 109 MASNGVVTVYGNGA-ISDPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATAVM 285 M +GVVTVYGNGA I++ KKS ++VKVGLAQMLRGGVIMDVVNA+QARIAEEAGA AVM Sbjct: 1 MEGSGVVTVYGNGAAITETKKSPFSVKVGLAQMLRGGVIMDVVNAQQARIAEEAGACAVM 60
Query: 286 ALERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVDYIDE 465 ALERVPADIRA+GGVARMSDP LIKEIK AVTIPVMAKARIGHFVEAQ+LEAIGVDY+DE Sbjct: 61 ALERVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGVDYVDE 120
Query: 466 SEVLTPADDVNHINKHNFRIPFVCGCRNLGEALRRIAEGAAMIRTKGEAGTG 621 SEVLT AD+ NHINKHNFRIPFVCGCRNLGEALRR+ EGAAMIRTKGEAGTG Sbjct: 121 SEVLTLADEDNHINKHNFRIPFVCGCRNLGEALRRVREGAAMIRTKGEAGTG 172
>tr|A9TIQ8|A9TIQ8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_170297 PE=4 SV=1 Length = 315
Score = 291 bits (745), Expect = 2e-77 Identities = 154/177 (87%), Positives = 162/177 (91%), Gaps = 6/177 (3%) Frame = +1
Query: 109 MASNGVVTVY---GNGAI--SDPKKS-SYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAG 270 M NGVV +Y GNG + ++ KKS SYAVKVGLAQMLRGGVIMDVV+A QARIAEEAG Sbjct: 1 MEGNGVVAIYRNNGNGLLENNNSKKSVSYAVKVGLAQMLRGGVIMDVVDANQARIAEEAG 60
Query: 271 ATAVMALERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGV 450 A AVMALERVPADIRAEGGVARMSDP +IKEIK AVTIPVMAKARIGHFVEAQ+LEAIGV Sbjct: 61 AVAVMALERVPADIRAEGGVARMSDPAMIKEIKKAVTIPVMAKARIGHFVEAQILEAIGV 120
Query: 451 DYIDESEVLTPADDVNHINKHNFRIPFVCGCRNLGEALRRIAEGAAMIRTKGEAGTG 621 DYIDESEVLTPADDVNHINKHN+RIPFVCGCRNLGEALRRIAEGAAMIRTKGEAGTG Sbjct: 121 DYIDESEVLTPADDVNHINKHNYRIPFVCGCRNLGEALRRIAEGAAMIRTKGEAGTG 177
>tr|A9S7G3|A9S7G3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_181982 PE=4 SV=1 Length = 314
Score = 288 bits (738), Expect = 1e-76 Identities = 151/176 (85%), Positives = 156/176 (88%), Gaps = 5/176 (2%) Frame = +1
Query: 109 MASNGVVTVYGNGAIS-----DPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGA 273 M NGVV VY N + K SYAVKVGLAQMLRGGVIMDVV+A QARIAEEAGA Sbjct: 1 MEGNGVVAVYHNNGSGLSENQNKKTVSYAVKVGLAQMLRGGVIMDVVDAAQARIAEEAGA 60
Query: 274 TAVMALERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVD 453 AVMALERVPADIRAEGGVARMSDP +IKEIK AVTIPVMAKARIGHFVEAQ+LEAIGVD Sbjct: 61 VAVMALERVPADIRAEGGVARMSDPSMIKEIKKAVTIPVMAKARIGHFVEAQILEAIGVD 120
Query: 454 YIDESEVLTPADDVNHINKHNFRIPFVCGCRNLGEALRRIAEGAAMIRTKGEAGTG 621 YIDESEVLTPADDVNHINKHN+RIPFVCGCRNLGEALRRIAEGAAMIRTKGEAGTG Sbjct: 121 YIDESEVLTPADDVNHINKHNYRIPFVCGCRNLGEALRRIAEGAAMIRTKGEAGTG 176
>tr|Q45FF2|Q45FF2_MEDTR Pyridoxine biosynthesis protein OS=Medicago truncatula PE=2 SV=1 Length = 314
Score = 286 bits (732), Expect = 7e-76 Identities = 147/176 (83%), Positives = 160/176 (90%), Gaps = 5/176 (2%) Frame = +1
Query: 109 MASNGVVTVYGNGAISDP-----KKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGA 273 M +GVVTVYGNGA+++ K S ++VKVGLAQMLRGGVIMDVVNAEQARIAEEAGA Sbjct: 1 MEGSGVVTVYGNGALTETTSTTTKSSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGA 60
Query: 274 TAVMALERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVD 453 AVMALERVPADIRA+GGVARMSDP LIKEIK AVTIPVMAKARIGHFVEAQ+LE++G+D Sbjct: 61 CAVMALERVPADIRAQGGVARMSDPQLIKEIKAAVTIPVMAKARIGHFVEAQILESLGID 120
Query: 454 YIDESEVLTPADDVNHINKHNFRIPFVCGCRNLGEALRRIAEGAAMIRTKGEAGTG 621 Y+DESEVLT AD+ NHINKHNFRIPFVCGCRNLGEALRRI EGAAMIRTKGEAGTG Sbjct: 121 YVDESEVLTLADEDNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTG 176
>tr|B6SJQ3|B6SJQ3_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 317
Score = 283 bits (723), Expect = 8e-75 Identities = 141/174 (81%), Positives = 157/174 (90%), Gaps = 6/174 (3%) Frame = +1
Query: 118 NGVVTVYGNGAIS------DPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATA 279 +GVVTVYGN + PK S+++VKVGLAQMLRGGVIMDVV EQAR+AEEAGA A Sbjct: 6 SGVVTVYGNNGAALLEPPKQPKSSTFSVKVGLAQMLRGGVIMDVVTPEQARLAEEAGACA 65
Query: 280 VMALERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVDYI 459 VMALERVPADIRA+GGVARMSDPGLI++IK AVTIPVMAKARIGHFVEAQ+LEA+GVDY+ Sbjct: 66 VMALERVPADIRAQGGVARMSDPGLIRDIKRAVTIPVMAKARIGHFVEAQILEAVGVDYV 125
Query: 460 DESEVLTPADDVNHINKHNFRIPFVCGCRNLGEALRRIAEGAAMIRTKGEAGTG 621 DESEVLTPADD +HINKHNFR+PFVCGCR+LGEALRR+ EGAAMIRTKGEAGTG Sbjct: 126 DESEVLTPADDAHHINKHNFRVPFVCGCRDLGEALRRVREGAAMIRTKGEAGTG 179
>tr|A9RLD0|A9RLD0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_176118 PE=4 SV=1 Length = 313
Score = 282 bits (722), Expect = 1e-74 Identities = 148/175 (84%), Positives = 155/175 (88%), Gaps = 4/175 (2%) Frame = +1
Query: 109 MASNGVVTVYGNGA----ISDPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGAT 276 M N VV V NG+ + K SYAVKVGLAQMLRGGVIMDVV+ QARIAEEAGA Sbjct: 1 MEENRVVAVLNNGSGLSENQNKKTVSYAVKVGLAQMLRGGVIMDVVDVAQARIAEEAGAV 60
Query: 277 AVMALERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVDY 456 AVMALERVPADIRAEGGVARMSDP +IKEIK AVTIPVMAKARIGHFVEAQ+LEAIGVDY Sbjct: 61 AVMALERVPADIRAEGGVARMSDPSMIKEIKKAVTIPVMAKARIGHFVEAQILEAIGVDY 120
Query: 457 IDESEVLTPADDVNHINKHNFRIPFVCGCRNLGEALRRIAEGAAMIRTKGEAGTG 621 IDESEVLTPADDV+HINKHN+RIPFVCGCRNLGEALRRIAEGAAMIRTKGEAGTG Sbjct: 121 IDESEVLTPADDVHHINKHNYRIPFVCGCRNLGEALRRIAEGAAMIRTKGEAGTG 175
>tr|A9TWQ5|A9TWQ5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_226199 PE=4 SV=1 Length = 315
Score = 281 bits (720), Expect = 2e-74 Identities = 150/177 (84%), Positives = 157/177 (88%), Gaps = 6/177 (3%) Frame = +1
Query: 109 MASNGVVTVY-----GNGAISDPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGA 273 M +GVV VY G ++ K SYAVKVGLAQMLRGGVIMDVV+A QARIAEEAGA Sbjct: 1 MEGDGVVAVYCDNGKGLSENNNKKTVSYAVKVGLAQMLRGGVIMDVVDANQARIAEEAGA 60
Query: 274 TAVMALERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARI-GHFVEAQVLEAIGV 450 AVMALERVPADIRAEGGVARMSDP +IKEIK AVTIPVMAKARI GHFVEAQ+LEAIGV Sbjct: 61 VAVMALERVPADIRAEGGVARMSDPSMIKEIKKAVTIPVMAKARIAGHFVEAQILEAIGV 120
Query: 451 DYIDESEVLTPADDVNHINKHNFRIPFVCGCRNLGEALRRIAEGAAMIRTKGEAGTG 621 DYIDESEVLTPADDVNHINKHN+RIPFVCGCRNLGEALRRIAEGAAMIRTKGEAGTG Sbjct: 121 DYIDESEVLTPADDVNHINKHNYRIPFVCGCRNLGEALRRIAEGAAMIRTKGEAGTG 177
>tr|B4FRZ2|B4FRZ2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 317
Score = 280 bits (717), Expect = 4e-74 Identities = 142/174 (81%), Positives = 158/174 (90%), Gaps = 6/174 (3%) Frame = +1
Query: 118 NGVVTVYG-NGA-----ISDPKKSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATA 279 +GVVTVYG NGA PK ++++VKVGLAQMLRGGVIMDVV EQAR+AEEAGA A Sbjct: 6 SGVVTVYGSNGAELLEPSKQPKSATFSVKVGLAQMLRGGVIMDVVTPEQARLAEEAGACA 65
Query: 280 VMALERVPADIRAEGGVARMSDPGLIKEIKNAVTIPVMAKARIGHFVEAQVLEAIGVDYI 459 VMALERVPADIRA+GGVARMSDPGLI++IK AVTIPVMAKARIGHFVEAQ+LEA+GVDY+ Sbjct: 66 VMALERVPADIRAQGGVARMSDPGLIRDIKRAVTIPVMAKARIGHFVEAQILEAVGVDYV 125
Query: 460 DESEVLTPADDVNHINKHNFRIPFVCGCRNLGEALRRIAEGAAMIRTKGEAGTG 621 DESEVLTPADD +HINKHNFR+PFVCGCR+LGEALRR+ EGAAMIRTKGEAGTG Sbjct: 126 DESEVLTPADDAHHINKHNFRVPFVCGCRDLGEALRRVREGAAMIRTKGEAGTG 179
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