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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK957460
Clone id TST39A01NGRL0028_G22
Library
Length 594
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0028_G22. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
TTTGAGGCTGCGAGTGATGGCGGCTACAACATTGATCCTTTCGCTTGGGAGAATGATGAT
CGTTCTAGGCGGAGACATGCCAATGCAGTTTCAAAGTACCCTGCACAGGTCAGGGTGAGT
ATTCGAGCTGAGAGACCAGCTCTTGAGGAAGAGAGCTTTCGTTCTATTTTGGACTATGTG
GAGGTTTCAAGGTTTAAATTGGAATTATCTGCGTTACAGGTGCAACAACTCCTCTCTTTA
TTTGATGCAGCTCATGCTGCAAGAAGGGAATGCATAGCTGCAAGAAATAGAGGAAAACAA
AGTTTGCGTAAAGTTAAGTACCGTGAATCCAAGTCTCCTCGATCGACTTCGAAATCCGAT
TCAGACTCTTATAGTGATTGTTCAAGTCAAGGTCTGAATTCTTGTGAAGATGAATGGGCA
GATGAAGTTGCATGTGAGGATTTGCATAGTCATGGAGAGCATGAACGAATGGTGAGTGAA
AGACTGAGCCAGCATTTTGACAAACGTCTCTTAAGGCTGCCGGCAGACGCTATTGATAAG
GTGGGAATGGGTTATTATAAGGATGAGTCTCGGGCCTGGAAAATGTCCTTTCAT
■■Homology search results ■■ -
sp_hit_id P37707
Definition sp|P37707|B2_DAUCA B2 protein OS=Daucus carota
Align length 66
Score (bit) 54.7
E-value 3.0e-07
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK957460|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0028_G22, 5'
         (594 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P37707|B2_DAUCA B2 protein OS=Daucus carota PE=2 SV=1               55   3e-07
sp|Q8SV60|Y6G5_ENCCU UPF0328 protein ECU06_1650 OS=Encephalitozo...    31   5.3  
sp|Q8BL06|UBP54_MOUSE Inactive ubiquitin carboxyl-terminal hydro...    31   5.3  
sp|Q7TN75|PEG10_MOUSE Retrotransposon-derived protein PEG10 OS=M...    31   5.3  
sp|Q54N54|Y6531_DICDI Putative uncharacterized protein DDB_G0285...    30   7.0  
sp|Q03F16|COAD_PEDPA Phosphopantetheine adenylyltransferase OS=P...    30   7.1  

>sp|P37707|B2_DAUCA B2 protein OS=Daucus carota PE=2 SV=1
          Length = 207

 Score = 54.7 bits (130), Expect = 3e-07
 Identities = 31/66 (46%), Positives = 40/66 (60%)
 Frame = +1

Query: 1   FEAASDGGYNIDPFAWENDDRSRRRHANAVSKYPAQVRVSIRAERPALEEESFRSILDYV 180
           FEAAS GG NIDP AWE+      +     S++PAQVRV  R     LEE+SFR IL + 
Sbjct: 128 FEAASFGGTNIDPTAWED------KKNQGESRFPAQVRVMTRKICEPLEEDSFRPILHHY 181

Query: 181 EVSRFK 198
           +  +F+
Sbjct: 182 DGPKFR 187


>sp|Q8SV60|Y6G5_ENCCU UPF0328 protein ECU06_1650 OS=Encephalitozoon
           cuniculi GN=ECU06_1650 PE=3 SV=1
          Length = 391

 Score = 30.8 bits (68), Expect = 5.3
 Identities = 27/120 (22%), Positives = 48/120 (40%), Gaps = 14/120 (11%)
 Frame = -3

Query: 580 SRPET-HPYNNPFPPYQ*RLPAALRDVCQNAGSVFHSP------FVHALHDYANPHMQ-L 425
           S PE   P  NP+P +Q + P      C +     +SP      ++H +H    P M   
Sbjct: 64  STPEPCSPPANPYPRHQIQFPQQYTPYCTHNEGFINSPHSQSYQYIHFIHISPLPRMNTT 123

Query: 424 HLPIHLHKNSDLDLNNHYKSLNRISKSIEET------WIHGT*LYANFVFLYFLQLCIPF 263
           H+P         +   H++ +  I+  +         +I     + + +FL F+ L +PF
Sbjct: 124 HVPEPHRTEQHTENQRHWRKILDIAPIVSIAFPAAMYFIFTKDSFEDSLFLRFITLLLPF 183


>sp|Q8BL06|UBP54_MOUSE Inactive ubiquitin carboxyl-terminal hydrolase
            54 OS=Mus musculus GN=Usp54 PE=1 SV=2
          Length = 1588

 Score = 30.8 bits (68), Expect = 5.3
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = -3

Query: 499  QNAGSVFHSP-FVHALHDYANPHMQLHLPIHLHKNSDLDLNNHYKSLNRISKSIEETW 329
            Q+ G++FHSP    A+H  + P   LH+P+    NS   L +      RI    ++ W
Sbjct: 1489 QSWGNLFHSPSHPSAVHPGSPPSSNLHVPLRSTWNSGPVLGSRTPGPRRIDMPPDDDW 1546


>sp|Q7TN75|PEG10_MOUSE Retrotransposon-derived protein PEG10 OS=Mus
           musculus GN=Peg10 PE=1 SV=2
          Length = 958

 Score = 30.8 bits (68), Expect = 5.3
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -3

Query: 478 HSPFVHALHDYANPHMQLHLPIHLHK 401
           H   +H +H + +PHM  HL  HLH+
Sbjct: 545 HPYLLHHVHPHVHPHMHQHLHQHLHQ 570


>sp|Q54N54|Y6531_DICDI Putative uncharacterized protein DDB_G0285495
           OS=Dictyostelium discoideum GN=DDB_G0285495 PE=4 SV=1
          Length = 495

 Score = 30.4 bits (67), Expect = 7.0
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = -3

Query: 379 NHYKSLNRISKSIEETWI 326
           +HY+ LNR+  SI+ETWI
Sbjct: 462 SHYQMLNRLESSIKETWI 479


>sp|Q03F16|COAD_PEDPA Phosphopantetheine adenylyltransferase
           OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w)
           GN=coaD PE=3 SV=1
          Length = 158

 Score = 30.4 bits (67), Expect = 7.1
 Identities = 16/61 (26%), Positives = 33/61 (54%), Gaps = 7/61 (11%)
 Frame = -1

Query: 162 TKALFLKSWSLSSNTHPDLCR-------VL*NCIGMSPPRTIIILPSERINVVAAITRSL 4
           TKAL++ S+   +N H D+ +        L   + ++  ++ +  P ER+N++  +TR L
Sbjct: 2   TKALYVGSFDPITNGHLDIIKRAAKIFDELTVVVAINTNKSALFTPQERVNLITQVTRDL 61

Query: 3   K 1
           +
Sbjct: 62  E 62
tr_hit_id A9SWJ4
Definition tr|A9SWJ4|A9SWJ4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 68
Score (bit) 65.9
E-value 2.0e-09
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK957460|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0028_G22, 5'
         (594 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9SWJ4|A9SWJ4_PHYPA Predicted protein OS=Physcomitrella paten...    66   2e-09
tr|B7FJI3|B7FJI3_MEDTR Putative uncharacterized protein OS=Medic...    58   5e-07
tr|A9T5I7|A9T5I7_PHYPA Predicted protein OS=Physcomitrella paten...    57   6e-07
tr|A9RF70|A9RF70_PHYPA Predicted protein OS=Physcomitrella paten...    57   6e-07
tr|A9REG4|A9REG4_PHYPA Predicted protein OS=Physcomitrella paten...    57   6e-07
tr|B8A073|B8A073_MAIZE Putative uncharacterized protein OS=Zea m...    57   1e-06
tr|B6T8N2|B6T8N2_MAIZE Gda-1 OS=Zea mays PE=2 SV=1                     57   1e-06
tr|B6TDG4|B6TDG4_MAIZE Gda-1 OS=Zea mays PE=2 SV=1                     56   1e-06
tr|B4FUR5|B4FUR5_MAIZE Putative uncharacterized protein OS=Zea m...    56   1e-06
tr|B8LQZ7|B8LQZ7_PICSI Putative uncharacterized protein OS=Picea...    55   3e-06
tr|Q8L6E9|Q8L6E9_PEA GDA2 protein OS=Pisum sativum GN=gda2 PE=2 ...    55   4e-06
tr|B7ZYQ7|B7ZYQ7_MAIZE Putative uncharacterized protein OS=Zea m...    55   4e-06
tr|B6TMX1|B6TMX1_MAIZE N-rich protein OS=Zea mays PE=2 SV=1            55   4e-06
tr|B4F858|B4F858_MAIZE Putative uncharacterized protein OS=Zea m...    55   4e-06
tr|Q6L4U7|Q6L4U7_ORYSJ Os05g0498700 protein OS=Oryza sativa subs...    54   5e-06
tr|B8AZL0|B8AZL0_ORYSI Putative uncharacterized protein OS=Oryza...    54   5e-06
tr|A9PHN9|A9PHN9_POPTR Putative uncharacterized protein OS=Popul...    54   5e-06
tr|A3B5I3|A3B5I3_ORYSJ Putative uncharacterized protein OS=Oryza...    54   5e-06
tr|Q38HW1|Q38HW1_SOLTU Putative uncharacterized protein OS=Solan...    54   7e-06
tr|O23769|O23769_CITPA Putative uncharacterized protein OS=Citru...    54   7e-06
tr|Q5JK83|Q5JK83_ORYSJ cDNA clone:001-207-H09, full insert seque...    54   9e-06
tr|Q5JK82|Q5JK82_ORYSJ Putative GDA2 protein (Os01g0550300 prote...    54   9e-06
tr|B8AA12|B8AA12_ORYSI Putative uncharacterized protein OS=Oryza...    54   9e-06
tr|Q5JZR1|Q5JZR1_SOYBN N-rich protein OS=Glycine max GN=nrp PE=2...    53   1e-05
tr|Q9LSC7|Q9LSC7_ARATH Similarity to unknown protein (AT3g27090/...    52   2e-05
tr|Q8LBT1|Q8LBT1_ARATH Gda-1, putative OS=Arabidopsis thaliana P...    52   2e-05
tr|Q5TKG4|Q5TKG4_ORYSJ Os05g0594100 protein OS=Oryza sativa subs...    52   3e-05
tr|A6N0R0|A6N0R0_ORYSI N-rich protein (Fragment) OS=Oryza sativa...    52   3e-05
tr|A3B7F0|A3B7F0_ORYSJ Putative uncharacterized protein OS=Oryza...    52   3e-05
tr|A2Y853|A2Y853_ORYSI Putative uncharacterized protein OS=Oryza...    52   3e-05

>tr|A9SWJ4|A9SWJ4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_234250 PE=4 SV=1
          Length = 1560

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 34/68 (50%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
 Frame = +1

Query: 1   FEAASDGGYNIDPFAWENDDRSRRRHANAVSKYPAQ--VRVSIRAERPALEEESFRSILD 174
           +EA SDGG NIDP AWEN  +  ++    VS+YPAQ  VRV +R ERP LEE  FR +L 
Sbjct: 253 YEATSDGGLNIDPEAWEN--KETKKGGGPVSRYPAQASVRVRLREERPPLEEAKFRPLLH 310

Query: 175 YVEVSRFK 198
           + +  +F+
Sbjct: 311 HYDGPKFR 318


>tr|B7FJI3|B7FJI3_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 302

 Score = 57.8 bits (138), Expect = 5e-07
 Identities = 30/66 (45%), Positives = 42/66 (63%)
 Frame = +1

Query: 1   FEAASDGGYNIDPFAWENDDRSRRRHANAVSKYPAQVRVSIRAERPALEEESFRSILDYV 180
           FEAAS GG NIDP AWE+      +     S++PAQVR+ +R    ALEE+SFR +L + 
Sbjct: 221 FEAASFGGSNIDPTAWED------KKCKGESRFPAQVRIRVRNICKALEEDSFRPVLHHY 274

Query: 181 EVSRFK 198
           +  +F+
Sbjct: 275 DGPKFR 280


>tr|A9T5I7|A9T5I7_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_191832 PE=4 SV=1
          Length = 177

 Score = 57.4 bits (137), Expect = 6e-07
 Identities = 30/66 (45%), Positives = 41/66 (62%)
 Frame = +1

Query: 1   FEAASDGGYNIDPFAWENDDRSRRRHANAVSKYPAQVRVSIRAERPALEEESFRSILDYV 180
           FEAAS GG NIDP AWE+      +     S++PAQVR  IR +   LEE+SFR +L + 
Sbjct: 97  FEAASFGGSNIDPTAWED------KKCRGESRFPAQVRTRIRKQCKPLEEDSFRPVLHHY 150

Query: 181 EVSRFK 198
           +  +F+
Sbjct: 151 DGPKFR 156


>tr|A9RF70|A9RF70_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_113222 PE=4 SV=1
          Length = 174

 Score = 57.4 bits (137), Expect = 6e-07
 Identities = 29/66 (43%), Positives = 42/66 (63%)
 Frame = +1

Query: 1   FEAASDGGYNIDPFAWENDDRSRRRHANAVSKYPAQVRVSIRAERPALEEESFRSILDYV 180
           +EAAS GG NIDP AWE+      +     S++PAQVR+ +R +   LEE+SFR IL + 
Sbjct: 90  YEAASFGGSNIDPTAWED------KKCRGESRFPAQVRIRVRKQCKPLEEDSFRPILHHY 143

Query: 181 EVSRFK 198
           +  +F+
Sbjct: 144 DGPKFR 149


>tr|A9REG4|A9REG4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_174170 PE=4 SV=1
          Length = 166

 Score = 57.4 bits (137), Expect = 6e-07
 Identities = 30/66 (45%), Positives = 41/66 (62%)
 Frame = +1

Query: 1   FEAASDGGYNIDPFAWENDDRSRRRHANAVSKYPAQVRVSIRAERPALEEESFRSILDYV 180
           FEAAS GG NIDP AWE+      +     S++PAQVR  IR +   LEE+SFR +L + 
Sbjct: 97  FEAASFGGSNIDPTAWED------KKCRGESRFPAQVRTRIRKQCKPLEEDSFRPVLHHY 150

Query: 181 EVSRFK 198
           +  +F+
Sbjct: 151 DGPKFR 156


>tr|B8A073|B8A073_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 302

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 30/66 (45%), Positives = 41/66 (62%)
 Frame = +1

Query: 1   FEAASDGGYNIDPFAWENDDRSRRRHANAVSKYPAQVRVSIRAERPALEEESFRSILDYV 180
           FEAAS GG NIDP AWE+      +     S++PAQVR+ IR     LEE+SFR +L + 
Sbjct: 223 FEAASFGGSNIDPTAWED------KKCKGESRFPAQVRICIRKLCKPLEEDSFRPVLHHY 276

Query: 181 EVSRFK 198
           +  +F+
Sbjct: 277 DGPKFR 282


>tr|B6T8N2|B6T8N2_MAIZE Gda-1 OS=Zea mays PE=2 SV=1
          Length = 301

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 30/66 (45%), Positives = 41/66 (62%)
 Frame = +1

Query: 1   FEAASDGGYNIDPFAWENDDRSRRRHANAVSKYPAQVRVSIRAERPALEEESFRSILDYV 180
           FEAAS GG NIDP AWE+      +     S++PAQVR+ IR     LEE+SFR +L + 
Sbjct: 222 FEAASFGGSNIDPTAWED------KKCKGESRFPAQVRICIRKLCKPLEEDSFRPVLHHY 275

Query: 181 EVSRFK 198
           +  +F+
Sbjct: 276 DGPKFR 281


>tr|B6TDG4|B6TDG4_MAIZE Gda-1 OS=Zea mays PE=2 SV=1
          Length = 323

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 29/66 (43%), Positives = 41/66 (62%)
 Frame = +1

Query: 1   FEAASDGGYNIDPFAWENDDRSRRRHANAVSKYPAQVRVSIRAERPALEEESFRSILDYV 180
           FEAAS GG NIDP AWE+      +     S++PAQVR+ +R     LEE+SFR +L + 
Sbjct: 244 FEAASFGGSNIDPTAWED------KKCKGESRFPAQVRIRVRKLCKPLEEDSFRPVLHHY 297

Query: 181 EVSRFK 198
           +  +F+
Sbjct: 298 DGPKFR 303


>tr|B4FUR5|B4FUR5_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 322

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 29/66 (43%), Positives = 41/66 (62%)
 Frame = +1

Query: 1   FEAASDGGYNIDPFAWENDDRSRRRHANAVSKYPAQVRVSIRAERPALEEESFRSILDYV 180
           FEAAS GG NIDP AWE+      +     S++PAQVR+ +R     LEE+SFR +L + 
Sbjct: 243 FEAASFGGSNIDPTAWED------KKCKGESRFPAQVRIRVRKLCKPLEEDSFRPVLHHY 296

Query: 181 EVSRFK 198
           +  +F+
Sbjct: 297 DGPKFR 302


>tr|B8LQZ7|B8LQZ7_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 282

 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 28/66 (42%), Positives = 41/66 (62%)
 Frame = +1

Query: 1   FEAASDGGYNIDPFAWENDDRSRRRHANAVSKYPAQVRVSIRAERPALEEESFRSILDYV 180
           FEAAS GG NIDP AWE+      +     S++PAQVR+ +R     LEE++FR +L + 
Sbjct: 203 FEAASFGGSNIDPTAWED------KKCKGESRFPAQVRIRVRKLCKPLEEDAFRPVLHHY 256

Query: 181 EVSRFK 198
           +  +F+
Sbjct: 257 DGPKFR 262