DK957465 |
Clone id |
TST39A01NGRL0028_H03 |
Library |
TST39 |
Length |
740 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0028_H03. 5' end sequence. |
Accession |
DK957465 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL234Contig1 |
Sequence |
GAGTCGGTGTTGTGAGAGAGTTGAGGGAAAATGGCGGAGGCAGCCGTGTGCGTGCCTTCT GCTTGGTCTTCCTCTGGTCTTCTTTCTCTGCAGAGCCAATCCTTGGAGACCACCTTGAGG CAGCCCTCGATCGGCAGTAACAGGACCTCTCTCCGCATCCATTGCGCCACGCAAGCCGCT GGTCTCCAGCCCGGCGGTACTCGTATAATTGGCGGCAAACGTGTCAAAGTCTTACAAATT GGGGACAAATCTGGTAAAATGCGTGATAAAATCATTGGTGAGCCTGCTGCAGTAAAGCTG TTGTCAAGGGTCCAACAACTAAGACTGCTGAGCAAAGCAGAGAAGGCGGGTCTCTTGTCA GCAGCCGAGAAAGCAGGATTATCCTTGTCTACCATAGAAAGGCTTGGCCTTCTTTCTAAG GCTGAAGGTCTTGGAGTCTTATCTGCAGCAACGAACCCAAGTACCCCTGGGACTTTGTTG ACGCTTGCCTTGGTTTTGCTCGCAGGGGGTCCGGCTTTTGTTTACTTTGTCCCAGAAGAT GCAATCTGGCAGATAGTTGTGCAGTTTGCAGTTGCTTTCATTTCTGTCCTGGGGGGGTCA GCTGCCTTTGCTGCCTCAAACTTTGTCTCCACCTTGCAAAAATCTGATTAATCAAATGAT CTATGAATGTATTTCTACTTTTTGTAAATGTGCTTTTGCAGCAAGGTTTTTTAAGTTCAA AAAAAAAAAAAAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q08BW0 |
Definition |
sp|Q08BW0|OTUD5_DANRE OTU domain-containing protein 5 OS=Danio rerio |
Align length |
97 |
Score (bit) |
36.6 |
E-value |
0.14 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NMI1 |
Definition |
tr|A9NMI1|A9NMI1_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
149 |
Score (bit) |
121.0 |
E-value |
4.0e-26 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957465|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0028_H03, 5' (718 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NMI1|A9NMI1_PICSI Putative uncharacterized protein OS=Picea... 121 4e-26 tr|Q9SD79|Q9SD79_ARATH Putative uncharacterized protein F13G24.2... 121 5e-26 tr|Q8VYV1|Q8VYV1_ARATH AT5g08050/F13G24_250 OS=Arabidopsis thali... 121 5e-26 tr|A9PGF4|A9PGF4_POPTR Putative uncharacterized protein OS=Popul... 114 6e-24 tr|A7QI04|A7QI04_VITVI Chromosome chr17 scaffold_101, whole geno... 111 5e-23 tr|A9S2G0|A9S2G0_PHYPA Predicted protein (Fragment) OS=Physcomit... 107 8e-22 tr|Q2QN86|Q2QN86_ORYSJ Os12g0575000 protein OS=Oryza sativa subs... 105 2e-21 tr|B8BMN2|B8BMN2_ORYSI Putative uncharacterized protein OS=Oryza... 105 2e-21 tr|A3CIP9|A3CIP9_ORYSJ Putative uncharacterized protein OS=Oryza... 105 2e-21 tr|B4FV96|B4FV96_MAIZE Putative uncharacterized protein OS=Zea m... 101 6e-20 tr|A2ZE10|A2ZE10_ORYSI Putative uncharacterized protein OS=Oryza... 83 2e-14 tr|Q2R4U2|Q2R4U2_ORYSJ Putative uncharacterized protein OS=Oryza... 73 2e-11 tr|B4FRC0|B4FRC0_MAIZE Putative uncharacterized protein OS=Zea m... 67 9e-10 tr|B6TFL9|B6TFL9_MAIZE Putative uncharacterized protein OS=Zea m... 66 2e-09 tr|B7FFF0|B7FFF0_MEDTR Putative uncharacterized protein OS=Medic... 62 5e-08 tr|Q0JLN9|Q0JLN9_ORYSJ cDNA clone:J023103B06, full insert sequen... 59 2e-07 tr|A2WRV9|A2WRV9_ORYSI Putative uncharacterized protein OS=Oryza... 59 2e-07 tr|A9NZ32|A9NZ32_PICSI Putative uncharacterized protein OS=Picea... 59 4e-07 tr|Q2QN87|Q2QN87_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 58 7e-07 tr|B7FKD0|B7FKD0_MEDTR Putative uncharacterized protein OS=Medic... 55 4e-06 tr|A9TJ04|A9TJ04_PHYPA Predicted protein OS=Physcomitrella paten... 55 4e-06 tr|A5C347|A5C347_VITVI Putative uncharacterized protein (Chromos... 54 1e-05 tr|A9TMU4|A9TMU4_PHYPA Predicted protein OS=Physcomitrella paten... 53 2e-05 tr|A9PJV1|A9PJV1_POPJC Putative uncharacterized protein OS=Popul... 53 2e-05 tr|A9S8Z7|A9S8Z7_PHYPA Predicted protein (Fragment) OS=Physcomit... 52 5e-05 tr|Q9SSF7|Q9SSF7_ARATH F25A4.30 protein OS=Arabidopsis thaliana ... 51 7e-05 tr|Q94F10|Q94F10_ARATH Putative uncharacterized protein (Putativ... 51 7e-05 tr|Q131H5|Q131H5_RHOPS Putative uncharacterized protein OS=Rhodo... 36 2.9 tr|Q5DFE7|Q5DFE7_SCHJA SJCHGC09605 protein OS=Schistosoma japoni... 36 2.9 tr|Q4TH71|Q4TH71_TETNG Chromosome undetermined SCAF3173, whole g... 35 3.7
>tr|A9NMI1|A9NMI1_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 183
Score = 121 bits (304), Expect = 4e-26 Identities = 71/149 (47%), Positives = 90/149 (60%), Gaps = 1/149 (0%) Frame = +1
Query: 202 RIIGGKR-VKVLQIGDKSGKMRDKIIGEPAAXXXXXXXXXXXXXXXAEKAGLLSAAEKAG 378 + +GG R VKV +GDKS +R K ++ AEKAGLLSAAEK+G Sbjct: 34 KAVGGTRQVKVFPLGDKSAVLRPKNEFNGSSIKLLSRVEQLKLLSKAEKAGLLSAAEKSG 93
Query: 379 LSLSTIERLGLLSKAEGLGVLSAATNPSXXXXXXXXXXXXXXXXXXFVYFVPEDAIWQIV 558 LSLS IE LGLLSKAE LG+LS+AT+P+ VYFVP+D+ W++ Sbjct: 94 LSLSKIESLGLLSKAEELGILSSATDPNTPGALLNLAIALLIAGPLCVYFVPDDSSWEVA 153
Query: 559 VQFAVAFISVLGGSAAFAASNFVSTLQKS 645 +Q +A +SV+GG AAFA SN VS LQKS Sbjct: 154 LQVVIALLSVVGGPAAFAGSNLVSKLQKS 182
>tr|Q9SD79|Q9SD79_ARATH Putative uncharacterized protein F13G24.250 OS=Arabidopsis thaliana GN=F13G24.250 PE=4 SV=1 Length = 158
Score = 121 bits (303), Expect = 5e-26 Identities = 66/104 (63%), Positives = 72/104 (69%) Frame = +1
Query: 337 AEKAGLLSAAEKAGLSLSTIERLGLLSKAEGLGVLSAATNPSXXXXXXXXXXXXXXXXXX 516 AEKAGLLS AEK+G SLSTIERLGLL+KAE GVLSAATNP Sbjct: 55 AEKAGLLSLAEKSGFSLSTIERLGLLTKAEEFGVLSAATNPETPGTLFTLSLGLLLLGPV 114
Query: 517 FVYFVPEDAIWQIVVQFAVAFISVLGGSAAFAASNFVSTLQKSD 648 F Y VPED W++V+Q VA +SVLGGSAAFAAS FVS LQKSD Sbjct: 115 FAYVVPEDYTWEVVIQVLVALLSVLGGSAAFAASGFVSNLQKSD 158
>tr|Q8VYV1|Q8VYV1_ARATH AT5g08050/F13G24_250 OS=Arabidopsis thaliana PE=2 SV=1 Length = 158
Score = 121 bits (303), Expect = 5e-26 Identities = 66/104 (63%), Positives = 72/104 (69%) Frame = +1
Query: 337 AEKAGLLSAAEKAGLSLSTIERLGLLSKAEGLGVLSAATNPSXXXXXXXXXXXXXXXXXX 516 AEKAGLLS AEK+G SLSTIERLGLL+KAE GVLSAATNP Sbjct: 55 AEKAGLLSLAEKSGFSLSTIERLGLLTKAEEFGVLSAATNPETPGTLFTLSLGLLLLGPV 114
Query: 517 FVYFVPEDAIWQIVVQFAVAFISVLGGSAAFAASNFVSTLQKSD 648 F Y VPED W++V+Q VA +SVLGGSAAFAAS FVS LQKSD Sbjct: 115 FAYVVPEDYTWEVVIQVLVALLSVLGGSAAFAASGFVSNLQKSD 158
>tr|A9PGF4|A9PGF4_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 194
Score = 114 bits (285), Expect = 6e-24 Identities = 64/104 (61%), Positives = 71/104 (68%) Frame = +1
Query: 337 AEKAGLLSAAEKAGLSLSTIERLGLLSKAEGLGVLSAATNPSXXXXXXXXXXXXXXXXXX 516 AEKAGLLSAAEK GLSLSTIE+LGLLSKAE LGVLSAAT+P Sbjct: 91 AEKAGLLSAAEKFGLSLSTIEKLGLLSKAEELGVLSAATDPGTPGALLSLSLGLLFLGPS 150
Query: 517 FVYFVPEDAIWQIVVQFAVAFISVLGGSAAFAASNFVSTLQKSD 648 Y VPED W++ +Q AV + V GGSAAFAASNFVS LQKS+ Sbjct: 151 CAYLVPEDYPWEVALQVAVVLLCVAGGSAAFAASNFVSNLQKSN 194
>tr|A7QI04|A7QI04_VITVI Chromosome chr17 scaffold_101, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00000042001 PE=4 SV=1 Length = 206
Score = 111 bits (277), Expect = 5e-23 Identities = 72/165 (43%), Positives = 85/165 (51%), Gaps = 1/165 (0%) Frame = +1
Query: 151 LRIHC-ATQAAGLQPGGTRIIGGKRVKVLQIGDKSGKMRDKIIGEPAAXXXXXXXXXXXX 327 L IH ATQ L P I K V +G+K R + P Sbjct: 42 LLIHSMATQKPTLPPASKTISSRKASTVFPLGEKGP--RSSPLATPPPIKLLTRVEQLKL 99
Query: 328 XXXAEKAGLLSAAEKAGLSLSTIERLGLLSKAEGLGVLSAATNPSXXXXXXXXXXXXXXX 507 AEKAGLLSAAEK G SLS+IE+LGLLSKAE G+LSAAT+P Sbjct: 100 LTKAEKAGLLSAAEKYGFSLSSIEKLGLLSKAEEFGILSAATDPGTPGALLSLSLVLLLL 159
Query: 508 XXXFVYFVPEDAIWQIVVQFAVAFISVLGGSAAFAASNFVSTLQK 642 + VPED W++ +Q VA + V+GGSAAFAASN VS LQK Sbjct: 160 GPSCAFLVPEDYPWEVALQLVVALVCVVGGSAAFAASNLVSNLQK 204
>tr|A9S2G0|A9S2G0_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_123160 PE=4 SV=1 Length = 119
Score = 107 bits (267), Expect = 8e-22 Identities = 62/104 (59%), Positives = 69/104 (66%) Frame = +1
Query: 337 AEKAGLLSAAEKAGLSLSTIERLGLLSKAEGLGVLSAATNPSXXXXXXXXXXXXXXXXXX 516 AEKAGLL+ E G SLS IE LGLLSKAE LGVLSAATNP+ Sbjct: 16 AEKAGLLTTVENLGFSLSKIESLGLLSKAEELGVLSAATNPATPGALLTTALALLLLGPV 75
Query: 517 FVYFVPEDAIWQIVVQFAVAFISVLGGSAAFAASNFVSTLQKSD 648 FVYFVPE + IV+Q +A ISV+GGSAAF ASNFVSTLQ S+ Sbjct: 76 FVYFVPETSTPLIVLQVIIAAISVVGGSAAFGASNFVSTLQNSE 119
>tr|Q2QN86|Q2QN86_ORYSJ Os12g0575000 protein OS=Oryza sativa subsp. japonica GN=Os12g0575000 PE=2 SV=1 Length = 190
Score = 105 bits (263), Expect = 2e-21 Identities = 60/103 (58%), Positives = 68/103 (66%) Frame = +1
Query: 337 AEKAGLLSAAEKAGLSLSTIERLGLLSKAEGLGVLSAATNPSXXXXXXXXXXXXXXXXXX 516 AEKAGLLSAAE+AGLSLS +ERLGLLSKAE L VLSAAT+P Sbjct: 86 AEKAGLLSAAERAGLSLSAVERLGLLSKAEELEVLSAATDPGTPGALLGVALLLLAAGPA 145
Query: 517 FVYFVPEDAIWQIVVQFAVAFISVLGGSAAFAASNFVSTLQKS 645 VY VPE+ W++ VQ VA V+GGS AFAAS+FVS LQ S Sbjct: 146 VVYLVPEEYPWEVAVQAVVALACVVGGSTAFAASSFVSKLQSS 188
>tr|B8BMN2|B8BMN2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_38846 PE=4 SV=1 Length = 190
Score = 105 bits (263), Expect = 2e-21 Identities = 60/103 (58%), Positives = 68/103 (66%) Frame = +1
Query: 337 AEKAGLLSAAEKAGLSLSTIERLGLLSKAEGLGVLSAATNPSXXXXXXXXXXXXXXXXXX 516 AEKAGLLSAAE+AGLSLS +ERLGLLSKAE L VLSAAT+P Sbjct: 86 AEKAGLLSAAERAGLSLSAVERLGLLSKAEELEVLSAATDPGTPGALLGVALLLLAAGPA 145
Query: 517 FVYFVPEDAIWQIVVQFAVAFISVLGGSAAFAASNFVSTLQKS 645 VY VPE+ W++ VQ VA V+GGS AFAAS+FVS LQ S Sbjct: 146 VVYLVPEEYPWEVAVQAVVALACVVGGSTAFAASSFVSKLQSS 188
>tr|A3CIP9|A3CIP9_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_035171 PE=4 SV=1 Length = 197
Score = 105 bits (263), Expect = 2e-21 Identities = 60/103 (58%), Positives = 68/103 (66%) Frame = +1
Query: 337 AEKAGLLSAAEKAGLSLSTIERLGLLSKAEGLGVLSAATNPSXXXXXXXXXXXXXXXXXX 516 AEKAGLLSAAE+AGLSLS +ERLGLLSKAE L VLSAAT+P Sbjct: 93 AEKAGLLSAAERAGLSLSAVERLGLLSKAEELEVLSAATDPGTPGALLGVALLLLAAGPA 152
Query: 517 FVYFVPEDAIWQIVVQFAVAFISVLGGSAAFAASNFVSTLQKS 645 VY VPE+ W++ VQ VA V+GGS AFAAS+FVS LQ S Sbjct: 153 VVYLVPEEYPWEVAVQAVVALACVVGGSTAFAASSFVSKLQSS 195
>tr|B4FV96|B4FV96_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 193
Score = 101 bits (251), Expect = 6e-20 Identities = 56/103 (54%), Positives = 66/103 (64%) Frame = +1
Query: 337 AEKAGLLSAAEKAGLSLSTIERLGLLSKAEGLGVLSAATNPSXXXXXXXXXXXXXXXXXX 516 AE+AGLLSAAE+AGLSLS +ERLGLLSK E LG LSAAT+P Sbjct: 89 AERAGLLSAAERAGLSLSAMERLGLLSKLEELGALSAATDPGTPGALLALALPLLAAGPA 148
Query: 517 FVYFVPEDAIWQIVVQFAVAFISVLGGSAAFAASNFVSTLQKS 645 VY VPE+ WQ+ +Q A + V+GG+AA AAS FVS LQ S Sbjct: 149 VVYLVPEEQAWQVALQAVAALVCVVGGAAAVAASTFVSRLQGS 191
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