DK957487 |
Clone id |
TST39A01NGRL0028_I01 |
Library |
TST39 |
Length |
686 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0028_I01. 5' end sequence. |
Accession |
DK957487 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL933Contig1 |
Sequence |
GGCAAGAGACATGGCCGGTCTGGTTCGCGTGAGCTTATTCTTATCTCTGTTGGTACTGTG GAGTGGCCATGTCTCTTCTGTGAGGGCGTCGGCCACTGCTAGCTACGTAGTCAAGGGCAA AGTCTACTGCGACTTCTGCCACACTGGACGTCCCACTGCTACGTTCAGCTCTTCCATCGA AGGAGCAGACGTGGCTGTACGCTGCACTTCGCCAGCTACTGGCGCGCAGACCTTCTACCG TGAAGGCAAATCGGCTAACGATGGCCAGTTTAGCATCCTCGTGCCGGCGTCGGCGTCGTC AGATACTTGCGTCGTGGCGCTGCTGAGAAGCTCCAGCCCTGAATGCAATGTGCTCGCGTC GCGTACAGTGGCAGATGTCAACTTTGCTGCCGGAAGGAACTCCGGGAAAATCTTGGCGGG TCCCTTCAGCTTTAAGCCCAGCAGAATGCCTACGCTCTGTGCCTCTCAGCGATTCGCACG TGTGCAGCTTGAGACTTACAGCCACCCGGAGACAGAAAGCTACCCGTCCCCTTCTCCCGA TTACTCCTCTCCGAAGCCACCATCTTCGCCGTCTCCTGTCGAAAAAACCGCCAGAGACCA AACCACCAACTTCGCCTTCTCCTGTCGAGAAGCCACCAGAAGTTAAACCCCCGTATGTAA AGCCACCGTCCTCGCCCTCTCCCGTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P13447 |
Definition |
sp|P13447|LAT52_SOLLC Anther-specific protein LAT52 OS=Solanum lycopersicum |
Align length |
79 |
Score (bit) |
58.9 |
E-value |
2.0e-08 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9LFU8 |
Definition |
tr|Q9LFU8|Q9LFU8_ARATH Proline-rich protein (At5g15780) OS=Arabidopsis thaliana |
Align length |
139 |
Score (bit) |
68.2 |
E-value |
5.0e-10 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957487|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0028_I01, 5' (686 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9LFU8|Q9LFU8_ARATH Proline-rich protein (At5g15780) OS=Arabi... 68 5e-10 tr|Q1KUY6|Q1KUY6_9ROSI Putative uncharacterized protein OS=Cleom... 68 5e-10 tr|A9NPL2|A9NPL2_PICSI Putative uncharacterized protein OS=Picea... 68 6e-10 tr|A9NMR9|A9NMR9_PICSI Putative uncharacterized protein OS=Picea... 68 6e-10 tr|A7PAE8|A7PAE8_VITVI Chromosome chr14 scaffold_9, whole genome... 64 9e-09 tr|B6T594|B6T594_MAIZE Pollen-specific protein C13 OS=Zea mays P... 62 3e-08 tr|B6SJ40|B6SJ40_MAIZE Pollen-specific protein C13 OS=Zea mays P... 61 8e-08 tr|Q2HSE9|Q2HSE9_MEDTR Pollen Ole e 1 allergen and extensin OS=M... 59 3e-07 tr|B7FKI5|B7FKI5_MEDTR Putative uncharacterized protein OS=Medic... 59 3e-07 tr|A7QDK6|A7QDK6_VITVI Chromosome chr10 scaffold_81, whole genom... 59 3e-07 tr|Q8RU50|Q8RU50_ORYSJ Os10g0371000 protein OS=Oryza sativa subs... 58 5e-07 tr|Q677C4|Q677C4_HYAOR Pollen-specific protein (Fragment) OS=Hya... 58 5e-07 tr|A2Z6J6|A2Z6J6_ORYSI Putative uncharacterized protein OS=Oryza... 58 5e-07 tr|Q29W25|Q29W25_CROSA Pollen allergen Cro s 1 OS=Crocus sativus... 57 1e-06 tr|Q7XAV4|Q7XAV4_FRAEX Allergen Fra e 1.0101 (Fragment) OS=Fraxi... 54 7e-06 tr|Q5EXJ6|Q5EXJ6_FRAEX Fra e 1.0102 major allergen (Fragment) OS... 54 7e-06 tr|Q650Z4|Q650Z4_ORYSJ Putative Pollen specific protein C13 OS=O... 54 9e-06 tr|Q0IZF0|Q0IZF0_ORYSJ Os09g0572800 protein OS=Oryza sativa subs... 54 9e-06 tr|B8BEU8|B8BEU8_ORYSI Putative uncharacterized protein OS=Oryza... 54 9e-06 tr|A3C1R9|A3C1R9_ORYSJ Putative uncharacterized protein OS=Oryza... 54 9e-06 tr|Q5Z7I0|Q5Z7I0_ORYSJ Os06g0556600 protein OS=Oryza sativa subs... 54 1e-05 tr|A2YE17|A2YE17_ORYSI Putative uncharacterized protein OS=Oryza... 54 1e-05 tr|B7FN25|B7FN25_MEDTR Putative uncharacterized protein OS=Medic... 53 2e-05 tr|Q9SZY5|Q9SZY5_ARATH SAH7 protein (Putative uncharacterized pr... 52 4e-05 tr|B7FGN2|B7FGN2_MEDTR Putative uncharacterized protein OS=Medic... 52 4e-05 tr|Q9LP44|Q9LP44_ARATH F28N24.16 protein OS=Arabidopsis thaliana... 52 5e-05 tr|Q6U740|Q6U740_FRAEX Allergen Fra e 1 OS=Fraxinus excelsior GN... 51 6e-05 tr|B6T2Z8|B6T2Z8_MAIZE Pollen allergen Phl p 11 OS=Zea mays PE=2... 51 8e-05 tr|Q9SES4|Q9SES4_SAMNI Allergen-like protein BRSn20 OS=Sambucus ... 50 1e-04 tr|B4FKQ2|B4FKQ2_MAIZE Putative uncharacterized protein OS=Zea m... 50 1e-04
>tr|Q9LFU8|Q9LFU8_ARATH Proline-rich protein (At5g15780) OS=Arabidopsis thaliana GN=F14F8_160 PE=2 SV=1 Length = 401
Score = 68.2 bits (165), Expect = 5e-10 Identities = 45/139 (32%), Positives = 66/139 (47%), Gaps = 9/139 (6%) Frame = +2
Query: 80 VRASATASYVVKGKVYCDFCHTGRPTATFSSSIEGADVAVRCTSPATGAQTFYREGKSAN 259 V +S VV G VYCD C G + + + I GA VAV C +F +E K+ Sbjct: 32 VMKKTRSSAVVVGTVYCDTCFNGAFSKSPNHLISGALVAVECID-ENSKPSFRQEVKTDK 90
Query: 260 DGQFSILVPASASSDT-----CVVALLRSSSPECNVLASRTVADVNFAA----GRNSGKI 412 G+F + +P S S C V LL SS P C++ +S T + + G N+ Sbjct: 91 RGEFKVKLPFSVSKHVKKIKRCSVKLLSSSQPYCSIASSATSSSLKRLKSNHHGENTRVF 150
Query: 413 LAGPFSFKPSRMPTLCASQ 469 AG F+F+P P +C+ + Sbjct: 151 SAGFFTFRPENQPEICSQK 169
>tr|Q1KUY6|Q1KUY6_9ROSI Putative uncharacterized protein OS=Cleome spinosa PE=4 SV=1 Length = 328
Score = 68.2 bits (165), Expect = 5e-10 Identities = 47/145 (32%), Positives = 71/145 (48%), Gaps = 7/145 (4%) Frame = +2
Query: 98 ASYVVKGKVYCDFCHTGRPTATFSSSIEGADVAVRCTSPATGAQTFYREGKSANDGQFSI 277 +S VV G VYCD C + + S I GA V V+C + +F +E K+ DG+F + Sbjct: 36 SSAVVVGTVYCDTCFMDVFSKSSSHFISGASVEVQCIDEYS-KPSFRQEVKTDEDGKFRV 94
Query: 278 LVPASASSDT-----CVVALLRSSSPECNVLASRTVADVNFAAGRN--SGKILAGPFSFK 436 +P S S C V LL SS P C++ +S + + + R+ + AG F+FK Sbjct: 95 KLPFSVSKHVKNIKRCSVKLLTSSEPYCSIASSASSSSLRRLKYRHHETRVFSAGFFTFK 154
Query: 437 PSRMPTLCASQRFARVQLETYSHPE 511 P P +C+ + ET S P+ Sbjct: 155 PENRPEICSQKPIGLKNSETSSLPD 179
>tr|A9NPL2|A9NPL2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 159
Score = 67.8 bits (164), Expect = 6e-10 Identities = 47/127 (37%), Positives = 62/127 (48%), Gaps = 2/127 (1%) Frame = +2
Query: 86 ASATASYVVKGKVYCDFCHTGRPTATFSSSIEGADVAVRCTSPATGAQTFYREGKSANDG 265 A A ++ V GKVYCD C G PT S I GA VAV C A G + FY E + N+G Sbjct: 22 AHAGHNFYVTGKVYCDNCAAGYPT-RISPPIPGATVAVECKDRA-GKRLFYNEQSTDNNG 79
Query: 266 QFSILVPASASSDTCVVALLRSSSPECNVL--ASRTVADVNFAAGRNSGKILAGPFSFKP 439 F+I V D C A SS CN+ +SR + G NS + GPF+++ Sbjct: 80 LFNIAVQGEHEHDAC-EAFTVSSPTSCNIPTDSSRGPVFLTHNNGINSDERKTGPFAYRS 138
Query: 440 SRMPTLC 460 + + C Sbjct: 139 TTTHSAC 145
>tr|A9NMR9|A9NMR9_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 159
Score = 67.8 bits (164), Expect = 6e-10 Identities = 47/127 (37%), Positives = 62/127 (48%), Gaps = 2/127 (1%) Frame = +2
Query: 86 ASATASYVVKGKVYCDFCHTGRPTATFSSSIEGADVAVRCTSPATGAQTFYREGKSANDG 265 A A ++ V GKVYCD C G PT S I GA VAV C A G + FY E + N+G Sbjct: 22 AHAGHNFYVTGKVYCDNCAAGYPT-RISPPIPGATVAVECKDRA-GKRLFYNEQSTDNNG 79
Query: 266 QFSILVPASASSDTCVVALLRSSSPECNVL--ASRTVADVNFAAGRNSGKILAGPFSFKP 439 F+I V D C A SS CN+ +SR + G NS + GPF+++ Sbjct: 80 LFNIAVQGEHEHDAC-EAFTVSSPTSCNIPTDSSRGPVFLTHNNGINSDERKTGPFAYRS 138
Query: 440 SRMPTLC 460 + + C Sbjct: 139 TTTHSAC 145
>tr|A7PAE8|A7PAE8_VITVI Chromosome chr14 scaffold_9, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00038084001 PE=4 SV=1 Length = 335
Score = 63.9 bits (154), Expect = 9e-09 Identities = 45/130 (34%), Positives = 64/130 (49%), Gaps = 6/130 (4%) Frame = +2
Query: 89 SATASYVVKGKVYCDFCHTGRPTATFSSSIEGADVAVRCTSPATGAQTFYREGKSANDGQ 268 S++ S VV G V+CD C + T S I GA V V C + +F +E K+ G Sbjct: 28 SSSPSAVVVGTVFCDTCFQEDFSKT-SHFISGASVVVEC-GDGSLKPSFQKEAKTNEHGV 85
Query: 269 FSILVPASASSDT-----CVVALLRSSSPECNVLASRTVADVNFAAGRNSGKIL-AGPFS 430 F + +P S S C V L+ SS P C+V ++ T + + + + I AG FS Sbjct: 86 FKVHLPISVSKHVRKIKRCSVRLISSSEPYCSVASTATSSSLRLKSRKQGIHIFSAGFFS 145
Query: 431 FKPSRMPTLC 460 FKP + P LC Sbjct: 146 FKPLKQPYLC 155
>tr|B6T594|B6T594_MAIZE Pollen-specific protein C13 OS=Zea mays PE=2 SV=1 Length = 172
Score = 62.4 bits (150), Expect = 3e-08 Identities = 47/125 (37%), Positives = 60/125 (48%), Gaps = 3/125 (2%) Frame = +2
Query: 98 ASYVVKGKVYCDFCHTGRPTATFSSSIEGADVAVRCTSPATGAQTFYREGKSANDGQFSI 277 AS+VV+G+V+CD C G T S+ I GA V V C S TGA T EG + G ++I Sbjct: 36 ASFVVRGRVWCDNCRAGFETPA-STYIAGAKVRVDCKSKTTGANTCSFEGHTDRTGTYNI 94
Query: 278 LVPASASSDTCVVALLRSSSPEC-NVLASRTVADVNFAA--GRNSGKILAGPFSFKPSRM 448 LV + C L+ S C NV+A R A V A+ G S LA F+ Sbjct: 95 LVIDEHEHELCESVLVSSPDKGCANVVAGRERAPVFLASNNGVASNVRLANALGFQKDVA 154
Query: 449 PTLCA 463 CA Sbjct: 155 LPRCA 159
>tr|B6SJ40|B6SJ40_MAIZE Pollen-specific protein C13 OS=Zea mays PE=2 SV=1 Length = 172
Score = 60.8 bits (146), Expect = 8e-08 Identities = 46/125 (36%), Positives = 59/125 (47%), Gaps = 3/125 (2%) Frame = +2
Query: 98 ASYVVKGKVYCDFCHTGRPTATFSSSIEGADVAVRCTSPATGAQTFYREGKSANDGQFSI 277 AS+VV+G+V+CD C G T S+ I GA V V C S TGA T EG + G ++I Sbjct: 36 ASFVVRGRVWCDNCRAGFETPA-STYIAGAKVRVDCKSKTTGANTCSFEGHTDRTGTYNI 94
Query: 278 LVPASASSDTCVVALLRSSSPEC-NVLASRTVADVNFAA--GRNSGKILAGPFSFKPSRM 448 LV + C L+ S C NV+A R A V + G S LA F+ Sbjct: 95 LVIDEHEHELCESVLVSSPDKGCANVVAGRERAPVFLTSNNGVASNVRLANALGFQKDVA 154
Query: 449 PTLCA 463 CA Sbjct: 155 LPRCA 159
>tr|Q2HSE9|Q2HSE9_MEDTR Pollen Ole e 1 allergen and extensin OS=Medicago truncatula GN=MtrDRAFT_AC151523g2v2 PE=4 SV=1 Length = 465
Score = 58.9 bits (141), Expect = 3e-07 Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 7/127 (5%) Frame = +2
Query: 101 SYVVKGKVYCDFCHTGRPTATFSSSIEGADVAVRCTSP-ATGAQTFYREGKSANDGQFSI 277 S VV G VYCD C + + + I GA V V C F ++ K+ G+F I Sbjct: 33 SAVVVGTVYCDTCFQ-QDFSMGNHFISGASVEVECKDGNEISKPRFKKQVKTNEHGEFKI 91
Query: 278 LVPASASSDT-----CVVALLRSSSPECNVLASRTVADVNFAAGRNSGKIL-AGPFSFKP 439 +P S S CVV L+ S+ P C++ ++ + + ++ + + I AG FSFKP Sbjct: 92 QLPFSVSKHVKRIKGCVVKLVSSNEPFCSIASAASSSSLHLKSRKQGLHIFSAGFFSFKP 151
Query: 440 SRMPTLC 460 + P LC Sbjct: 152 LKQPNLC 158
>tr|B7FKI5|B7FKI5_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 261
Score = 58.9 bits (141), Expect = 3e-07 Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 7/127 (5%) Frame = +2
Query: 101 SYVVKGKVYCDFCHTGRPTATFSSSIEGADVAVRCTSP-ATGAQTFYREGKSANDGQFSI 277 S VV G VYCD C + + + I GA V V C F ++ K+ G+F I Sbjct: 32 SAVVVGTVYCDTCFQ-QDFSMGNHFISGASVEVECKDGNEISKPRFKKQVKTNEHGEFKI 90
Query: 278 LVPASASSDT-----CVVALLRSSSPECNVLASRTVADVNFAAGRNSGKIL-AGPFSFKP 439 +P S S CVV L+ S+ P C++ ++ + + ++ + + I AG FSFKP Sbjct: 91 QLPFSVSKHVKRIKGCVVKLVSSNEPFCSIASAASSSSLHLKSRKQGLHIFSAGFFSFKP 150
Query: 440 SRMPTLC 460 + P LC Sbjct: 151 LKQPNLC 157
>tr|A7QDK6|A7QDK6_VITVI Chromosome chr10 scaffold_81, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00035877001 PE=4 SV=1 Length = 168
Score = 58.9 bits (141), Expect = 3e-07 Identities = 40/126 (31%), Positives = 62/126 (49%), Gaps = 6/126 (4%) Frame = +2
Query: 74 SSVRASATASYVVKGKVYCDFCHTGRPTATFSSSIEGADVAVRCTSPATGAQTFYREGKS 253 +SVRA + VKG+VYCD C T S + GA V + C G+ T+ +G++ Sbjct: 22 ASVRAEP--HFFVKGQVYCDTCRIQFITRV-SEYVPGAKVRLECRDREGGSVTYSIDGET 78
Query: 254 ANDGQFSILVPASASSDTCVVALLRSSSPECNVLA----SRTVADVNFAA--GRNSGKIL 415 G + + V + C V L++SS PEC+ ++ +R A ++ A+ G S L Sbjct: 79 DETGSYRLPVEGEHEEEVCEVQLIKSSKPECSEISRGVFARRSARISLASNNGMASSDRL 138
Query: 416 AGPFSF 433 A P F Sbjct: 139 ANPLGF 144
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