Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957510|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0028_I24, 5' (647 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb... 407 e-113 sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast... 344 2e-94 sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop... 342 1e-93 sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl... 342 1e-93 sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop... 340 3e-93 sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplas... 340 3e-93 sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop... 340 5e-93 sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop... 340 5e-93 sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop... 339 6e-93 sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl... 339 6e-93 sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas... 339 6e-93 sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop... 338 1e-92 sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloropl... 338 2e-92 sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro... 337 2e-92 sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop... 337 2e-92 sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas... 337 4e-92 sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop... 337 4e-92 sp|P04780|CB22_PETSP Chlorophyll a-b binding protein 22L, chloro... 336 5e-92 sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop... 336 5e-92 sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro... 336 7e-92 sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro... 334 2e-91 sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb... 334 3e-91 sp|P08963|CB22_HORVU Chlorophyll a-b binding protein 2, chloropl... 333 4e-91 sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2, chloropl... 333 4e-91 sp|P08221|CB21_CUCSA Chlorophyll a-b binding protein of LHCII ty... 333 4e-91 sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl... 333 5e-91 sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas... 333 5e-91 sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb... 332 8e-91 sp|P12330|CB21_ORYSJ Chlorophyll a-b binding protein 1, chloropl... 332 8e-91 sp|P27490|CB28_PEA Chlorophyll a-b binding protein 8, chloroplas... 332 1e-90
>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1 Length = 265
Score = 407 bits (1046), Expect = e-113 Identities = 201/213 (94%), Positives = 208/213 (97%), Gaps = 1/213 (0%) Frame = +2
Query: 11 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPK-KSSSGSIWYGSDRPLYLG 187 MA +TA+L+S+ FSGQQLKPVNELSRKVGAGEARVQMMAPK K+ SGSIWYGSDRPLYLG Sbjct: 1 MATSTAALTST-FSGQQLKPVNELSRKVGAGEARVQMMAPKSKAPSGSIWYGSDRPLYLG 59
Query: 188 PFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLA 367 PFSGSPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLA Sbjct: 60 PFSGSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLA 119
Query: 368 KNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG 547 KNGVKFGEAVWFKAGSQIFA+GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG Sbjct: 120 KNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG 179
Query: 548 PLGEVEDPIYPGGSFDPLGLADDPEAFAELXVK 646 PLGEVEDPIYPGGSFDPLGLADDPEAFAEL VK Sbjct: 180 PLGEVEDPIYPGGSFDPLGLADDPEAFAELKVK 212
>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1 Length = 269
Score = 344 bits (883), Expect = 2e-94 Identities = 170/215 (79%), Positives = 187/215 (86%), Gaps = 3/215 (1%) Frame = +2
Query: 11 MAATTASLSSSVFSGQQLKPVNELSRKV-GAGEARVQMMAPKKSSSGS--IWYGSDRPLY 181 MAA TA S+++ +KPVNELSRKV G EARV M S+GS IWYG+DRP + Sbjct: 1 MAAATAMHSTALAGQSLVKPVNELSRKVLGNVEARVTMRRTVSKSAGSDTIWYGADRPKF 60
Query: 182 LGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPEL 361 LGPFSG PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPEL Sbjct: 61 LGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPEL 120
Query: 362 LAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA 541 LAK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVA Sbjct: 121 LAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVA 180
Query: 542 GGPLGEVEDPIYPGGSFDPLGLADDPEAFAELXVK 646 GGPLGEV DPIYPGGSFDPLGLADDP+ FAEL VK Sbjct: 181 GGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVK 215
Score = 31.2 bits (69), Expect = 4.9 Identities = 17/61 (27%), Positives = 28/61 (45%) Frame = +2
Query: 194 SGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKN 373 +G P +T +D GL+ DP+TFA+ + E+ + R AM G ++ Sbjct: 180 AGGPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 239
Query: 374 G 376 G Sbjct: 240 G 240
>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1 Length = 267
Score = 342 bits (877), Expect = 1e-93 Identities = 168/214 (78%), Positives = 182/214 (85%), Gaps = 2/214 (0%) Frame = +2
Query: 11 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKK--SSSGSIWYGSDRPLYL 184 MA +T +LSSS F+G+ +K S G G ++ A K +SSGS WYG DR YL Sbjct: 1 MATSTMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYL 60
Query: 185 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 364 GPFSG PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELL Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 365 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 544 A+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AG Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 180
Query: 545 GPLGEVEDPIYPGGSFDPLGLADDPEAFAELXVK 646 GPLGEV DP+YPGGSFDPLGLADDPEAFAEL VK Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 214
>sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1 Length = 262
Score = 342 bits (876), Expect = 1e-93 Identities = 168/217 (77%), Positives = 186/217 (85%), Gaps = 5/217 (2%) Frame = +2
Query: 11 MAATTASLSSSVFSGQQLKPVNELSRKVGA-GEARVQMMA----PKKSSSGSIWYGSDRP 175 MAA+T ++SS+ +G +K VG+ GE R+ M PK ++SGS WYG DR Sbjct: 1 MAASTMAISSTAMAGTPIK--------VGSFGEGRITMRKTVGKPKVAASGSPWYGPDRV 52
Query: 176 LYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTP 355 YLGPFSG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV P Sbjct: 53 KYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP 112
Query: 356 ELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR 535 ELL++NGVKFGEAVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWACQV+LMGAVEGYR Sbjct: 113 ELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYR 172
Query: 536 VAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELXVK 646 +AGGPLGEV DP+YPGGSFDPLGLADDPEAFAEL VK Sbjct: 173 IAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVK 209
>sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1 Length = 265
Score = 340 bits (873), Expect = 3e-93 Identities = 167/217 (76%), Positives = 186/217 (85%), Gaps = 5/217 (2%) Frame = +2
Query: 11 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMM-----APKKSSSGSIWYGSDRP 175 MA++T +LSS+ F+G+ + + L GEARV M A +SSGS WYG DR Sbjct: 1 MASSTMALSSTAFAGKAVNVPSSLF-----GEARVTMRKTAAKAKPAASSGSPWYGPDRV 55
Query: 176 LYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTP 355 LYLGP SG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV P Sbjct: 56 LYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFP 115
Query: 356 ELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYR 535 ELLA+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSL+HAQSILAIWACQV+LMGA+EGYR Sbjct: 116 ELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAIEGYR 175
Query: 536 VAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELXVK 646 VAGGPLGEV DP+YPGG+FDPLGLADDPEAFA++ VK Sbjct: 176 VAGGPLGEVVDPLYPGGTFDPLGLADDPEAFADVKVK 212
>sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1 Length = 266
Score = 340 bits (873), Expect = 3e-93 Identities = 170/216 (78%), Positives = 182/216 (84%), Gaps = 4/216 (1%) Frame = +2
Query: 11 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAP----KKSSSGSIWYGSDRPL 178 MAATT SLSSS F+G K V L G+ARV M K+ SS S WYGSDR L Sbjct: 1 MAATTMSLSSSSFAG---KAVKNLPSSALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVL 57
Query: 179 YLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPE 358 YLGP SG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE Sbjct: 58 YLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 117
Query: 359 LLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRV 538 LLA+NGVKFGEA WFKAGSQIF+DGGLDYLGNPSLVHAQS+LAIWACQV+LMGAVEGYR+ Sbjct: 118 LLARNGVKFGEAGWFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRI 177
Query: 539 AGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELXVK 646 AGGPLGE+ DP+YPGGSFDPLGLA+ P+AFAEL VK Sbjct: 178 AGGPLGEIVDPLYPGGSFDPLGLAERPQAFAELKVK 213
>sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1 Length = 267
Score = 340 bits (871), Expect = 5e-93 Identities = 168/214 (78%), Positives = 181/214 (84%), Gaps = 2/214 (0%) Frame = +2
Query: 11 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKS--SSGSIWYGSDRPLYL 184 MAA T +LSSS F+G+ +K S G G+ ++ K SSGS WYG DR YL Sbjct: 1 MAAATMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYL 60
Query: 185 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 364 GPFSG PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELL Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 365 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 544 A+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAG Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180
Query: 545 GPLGEVEDPIYPGGSFDPLGLADDPEAFAELXVK 646 GPLGEV DP+YPGGSFDPLGLA+DPEAFAEL VK Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVK 214
>sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1 Length = 267
Score = 340 bits (871), Expect = 5e-93 Identities = 168/214 (78%), Positives = 182/214 (85%), Gaps = 2/214 (0%) Frame = +2
Query: 11 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKS--SSGSIWYGSDRPLYL 184 MAA+T +LSS F+G+ +K S G G+ ++ A K SSGS WYG DR YL Sbjct: 1 MAASTMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYL 60
Query: 185 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 364 GPFSG PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELL Sbjct: 61 GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 365 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 544 A+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAG Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180
Query: 545 GPLGEVEDPIYPGGSFDPLGLADDPEAFAELXVK 646 GPLGEV DP+YPGGSFDPLGLA+DPEAFAEL VK Sbjct: 181 GPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVK 214
>sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1 Length = 265
Score = 339 bits (870), Expect = 6e-93 Identities = 165/212 (77%), Positives = 178/212 (83%) Frame = +2
Query: 11 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 190 MAA T +LSS F+GQ +K S G G ++ K + S S WYG DR YLGP Sbjct: 1 MAAATMALSSPSFAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGP 60
Query: 191 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 370 FSG PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+ Sbjct: 61 FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120
Query: 371 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 550 NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AGGP Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGP 180
Query: 551 LGEVEDPIYPGGSFDPLGLADDPEAFAELXVK 646 LGEV DP+YPGGSFDPLGLA+DPEAFAEL VK Sbjct: 181 LGEVVDPLYPGGSFDPLGLAEDPEAFAELKVK 212
>sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1 Length = 267
Score = 339 bits (870), Expect = 6e-93 Identities = 168/214 (78%), Positives = 180/214 (84%), Gaps = 2/214 (0%) Frame = +2
Query: 11 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEA--RVQMMAPKKSSSGSIWYGSDRPLYL 184 M A+T +LSS F+G +K S G G+A R + K SSGS WYG DR YL Sbjct: 1 MTASTMALSSPSFAGNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYL 60
Query: 185 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 364 GPFSG PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELL Sbjct: 61 GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120
Query: 365 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 544 A+NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGA+EGYRVAG Sbjct: 121 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAG 180
Query: 545 GPLGEVEDPIYPGGSFDPLGLADDPEAFAELXVK 646 GPLGEV DP+YPGGSFDPLGLADDPEAFAEL VK Sbjct: 181 GPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVK 214
Score = 30.4 bits (67), Expect = 8.3 Identities = 17/61 (27%), Positives = 27/61 (44%) Frame = +2
Query: 194 SGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKN 373 +G P +T +D GL+ DPE FA+ + E+ + R AM G ++ Sbjct: 179 AGGPLGEVTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGK 238
Query: 374 G 376 G Sbjct: 239 G 239
|
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK957510|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0028_I24, 5' (647 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella paten... 358 2e-97 tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella paten... 357 3e-97 tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding ... 355 2e-96 tr|A9T914|A9T914_PHYPA Predicted protein OS=Physcomitrella paten... 354 2e-96 tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella paten... 354 3e-96 tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein OS=Physco... 353 5e-96 tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella paten... 353 5e-96 tr|A9S6S7|A9S6S7_PHYPA Predicted protein OS=Physcomitrella paten... 351 2e-95 tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella paten... 351 2e-95 tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella paten... 350 4e-95 tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella paten... 349 7e-95 tr|O24401|O24401_WHEAT Chlorophyll a/b-binding protein WCAB OS=T... 348 2e-94 tr|Q765P6|Q765P6_PHYPA Light-harvesting chlorophyll a/b-binding ... 347 5e-94 tr|B0L806|B0L806_9POAL Chloroplast chlorophyll a/b binding prote... 346 8e-94 tr|Q43437|Q43437_SOYBN Photosystem II type I chlorophyll a/b-bin... 345 1e-93 tr|Q1KLZ3|Q1KLZ3_9ROSI Putative chloroplast chlorophyll a/b-bind... 345 1e-93 tr|A9RBQ3|A9RBQ3_PHYPA Predicted protein OS=Physcomitrella paten... 345 1e-93 tr|B4FUA1|B4FUA1_MAIZE Chlorophyll a-b binding protein 1 OS=Zea ... 344 2e-93 tr|B4FQ80|B4FQ80_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ... 343 7e-93 tr|A8QJP9|A8QJP9_BAMOL Chloroplast light-harvesting chlorophyll ... 343 7e-93 tr|Q9M600|Q9M600_EUPES Chlorophyll a/b binding protein OS=Euphor... 342 9e-93 tr|Q41424|Q41424_SOLTU Chlorophyll a/b binding protein OS=Solanu... 342 1e-92 tr|Q39768|Q39768_GINBI Light-harvesting chlorophyll a/b binding ... 342 1e-92 tr|O64446|O64446_NICSY Light harvesting chlorophyll a/b-binding ... 342 1e-92 tr|O64444|O64444_NICSY Light harvesting chlorophyll a/b-binding ... 342 1e-92 tr|B4FNR1|B4FNR1_MAIZE Chlorophyll a-b binding protein 2 OS=Zea ... 342 1e-92 tr|A4F3R4|A4F3R4_SPIOL Major chlorophyll a/b binding protein LHC... 342 1e-92 tr|Q2XTE0|Q2XTE0_SOLTU Chlorophyll a-b binding protein 3C-like O... 341 2e-92 tr|A9RBQ5|A9RBQ5_PHYPA Predicted protein OS=Physcomitrella paten... 341 2e-92 tr|Q41421|Q41421_SOLTU Chlorophyll a/b binding protein OS=Solanu... 341 3e-92
>tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_108362 PE=4 SV=1 Length = 263
Score = 358 bits (918), Expect = 2e-97 Identities = 175/212 (82%), Positives = 187/212 (88%) Frame = +2
Query: 11 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 190 MAA TA S+++ LKPVNELSRKVG EARV M K S S SIWYG+DRP +LGP Sbjct: 1 MAAATAMHSTTLAGQSLLKPVNELSRKVGTSEARVSMR--KSSGSDSIWYGADRPKFLGP 58
Query: 191 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 370 FSG PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELLAK Sbjct: 59 FSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAK 118
Query: 371 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 550 NGVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP Sbjct: 119 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 178
Query: 551 LGEVEDPIYPGGSFDPLGLADDPEAFAELXVK 646 LGEV DPIYPGGSFDPLGLADDP+ FAEL VK Sbjct: 179 LGEVTDPIYPGGSFDPLGLADDPDTFAELKVK 210
>tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_105126 PE=4 SV=1 Length = 265
Score = 357 bits (917), Expect = 3e-97 Identities = 172/212 (81%), Positives = 189/212 (89%) Frame = +2
Query: 11 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 190 MAA TA S+++ LKPVNELSRKVG+ EARV M KS+S SIWYG+DRP YLGP Sbjct: 1 MAAATAMHSTTLAGQSLLKPVNELSRKVGSSEARVTMRRTVKSTSDSIWYGADRPKYLGP 60
Query: 191 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 370 FSG PSYLTGEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLAK Sbjct: 61 FSGETPSYLTGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAK 120
Query: 371 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 550 +GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYRVAGGP Sbjct: 121 SGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRVAGGP 180
Query: 551 LGEVEDPIYPGGSFDPLGLADDPEAFAELXVK 646 LGE+ DPIYPGGSFDPLGLADDP+ FAEL VK Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPDTFAELKVK 212
>tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding protein 2 (Predicted protein) OS=Physcomitrella patens subsp. patens GN=PpLhcb2 PE=4 SV=1 Length = 267
Score = 355 bits (910), Expect = 2e-96 Identities = 173/214 (80%), Positives = 188/214 (87%), Gaps = 2/214 (0%) Frame = +2
Query: 11 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGS--IWYGSDRPLYL 184 MAA TA S+++ LKPVNELSRKVG+ +ARV M S+GS IWYG+DRP YL Sbjct: 1 MAACTACASTALAGQSLLKPVNELSRKVGSSQARVTMRRTVNKSAGSDSIWYGADRPKYL 60
Query: 185 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 364 GPFSG PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELL Sbjct: 61 GPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELL 120
Query: 365 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 544 AK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG Sbjct: 121 AKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 180
Query: 545 GPLGEVEDPIYPGGSFDPLGLADDPEAFAELXVK 646 GPLGEV DPIYPGGSFDPLGLADDP+ FAEL VK Sbjct: 181 GPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVK 214
>tr|A9T914|A9T914_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_220036 PE=4 SV=1 Length = 263
Score = 354 bits (909), Expect = 2e-96 Identities = 172/212 (81%), Positives = 188/212 (88%) Frame = +2
Query: 11 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 190 MAA TA S+++ LKPVNELSR+VGA EARV M K + S SIWYG+DRP +LGP Sbjct: 1 MAAATACASTALAGQSLLKPVNELSRRVGANEARVTMR--KSAGSDSIWYGADRPKFLGP 58
Query: 191 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 370 FSG PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLAK Sbjct: 59 FSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAK 118
Query: 371 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 550 +GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP Sbjct: 119 SGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 178
Query: 551 LGEVEDPIYPGGSFDPLGLADDPEAFAELXVK 646 LGEV DPIYPGGSFDPLGLADDP+ FAEL VK Sbjct: 179 LGEVTDPIYPGGSFDPLGLADDPDTFAELKVK 210
>tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_176684 PE=4 SV=1 Length = 265
Score = 354 bits (908), Expect = 3e-96 Identities = 172/212 (81%), Positives = 185/212 (87%) Frame = +2
Query: 11 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 190 MAA TA S+++ LKPVNELSRKVG EAR+ M SS SIWYG+DRP YLGP Sbjct: 1 MAAATAMHSTALAGQSLLKPVNELSRKVGNVEARISMRKTASKSSDSIWYGADRPKYLGP 60
Query: 191 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 370 FSG PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELLAK Sbjct: 61 FSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAK 120
Query: 371 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 550 NGVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAGGP Sbjct: 121 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGP 180
Query: 551 LGEVEDPIYPGGSFDPLGLADDPEAFAELXVK 646 LG+V DPIYPGGSFDPLGLADDP+ FAEL VK Sbjct: 181 LGDVTDPIYPGGSFDPLGLADDPDTFAELKVK 212
>tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein OS=Physcomitrella patens PE=2 SV=1 Length = 268
Score = 353 bits (906), Expect = 5e-96 Identities = 172/215 (80%), Positives = 190/215 (88%), Gaps = 3/215 (1%) Frame = +2
Query: 11 MAATTASLSSSVFSGQQL-KPVNELSRKVGAGEARVQMM--APKKSSSGSIWYGSDRPLY 181 MA +++S+V +GQ L KPV+ELSRKV AGEARV M K S S SIWYG+DRP + Sbjct: 1 MATAATAMNSTVLAGQALLKPVSELSRKVNAGEARVTMRKTVSKSSGSDSIWYGADRPKF 60
Query: 182 LGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPEL 361 LGPFSG PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPEL Sbjct: 61 LGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPEL 120
Query: 362 LAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA 541 LAK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA Sbjct: 121 LAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA 180
Query: 542 GGPLGEVEDPIYPGGSFDPLGLADDPEAFAELXVK 646 GGPLG+V DPIYPGGSFDPLGLADDP+ FAEL VK Sbjct: 181 GGPLGDVTDPIYPGGSFDPLGLADDPDTFAELKVK 215
>tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_219547 PE=4 SV=1 Length = 268
Score = 353 bits (906), Expect = 5e-96 Identities = 172/215 (80%), Positives = 190/215 (88%), Gaps = 3/215 (1%) Frame = +2
Query: 11 MAATTASLSSSVFSGQQL-KPVNELSRKVGAGEARVQMM--APKKSSSGSIWYGSDRPLY 181 MA +++S+V +GQ L KPV+ELSRKV AGEARV M K S S SIWYG+DRP + Sbjct: 1 MATAATAMNSTVLAGQALLKPVSELSRKVNAGEARVTMRKTVSKSSGSDSIWYGADRPKF 60
Query: 182 LGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPEL 361 LGPFSG PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPEL Sbjct: 61 LGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPEL 120
Query: 362 LAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA 541 LAK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA Sbjct: 121 LAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVA 180
Query: 542 GGPLGEVEDPIYPGGSFDPLGLADDPEAFAELXVK 646 GGPLG+V DPIYPGGSFDPLGLADDP+ FAEL VK Sbjct: 181 GGPLGDVTDPIYPGGSFDPLGLADDPDTFAELKVK 215
>tr|A9S6S7|A9S6S7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_209208 PE=4 SV=1 Length = 263
Score = 351 bits (900), Expect = 2e-95 Identities = 174/212 (82%), Positives = 187/212 (88%) Frame = +2
Query: 11 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 190 MAA TA+ S+++ LK +NELSRKVG +ARV M K SSS SIWYG+DRP YLGP Sbjct: 1 MAACTATHSTALAGQTALKSINELSRKVGNVQARVTMR--KASSSDSIWYGADRPKYLGP 58
Query: 191 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 370 SG PSYLTGEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELLAK Sbjct: 59 LSGETPSYLTGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAK 118
Query: 371 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGP 550 NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAGGP Sbjct: 119 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGP 178
Query: 551 LGEVEDPIYPGGSFDPLGLADDPEAFAELXVK 646 LGEV DPIYPGGSFDPLGLADDP+ FAEL VK Sbjct: 179 LGEVTDPIYPGGSFDPLGLADDPDTFAELKVK 210
>tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_175594 PE=4 SV=1 Length = 267
Score = 351 bits (900), Expect = 2e-95 Identities = 173/214 (80%), Positives = 188/214 (87%), Gaps = 2/214 (0%) Frame = +2
Query: 11 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMM--APKKSSSGSIWYGSDRPLYL 184 MAA TA S+++ LKPVNELSRKVG EARV M A K ++S SIWYG+DRP YL Sbjct: 1 MAAATAMHSTALAGQSLLKPVNELSRKVGNVEARVSMRKSASKSAASDSIWYGADRPKYL 60
Query: 185 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 364 GPFSG PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELL Sbjct: 61 GPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELL 120
Query: 365 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 544 AK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAG Sbjct: 121 AKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAG 180
Query: 545 GPLGEVEDPIYPGGSFDPLGLADDPEAFAELXVK 646 GPLG+V DPIYPGGSFDPLGLADDP+ FAEL VK Sbjct: 181 GPLGDVTDPIYPGGSFDPLGLADDPDTFAELKVK 214
>tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_155384 PE=4 SV=1 Length = 267
Score = 350 bits (898), Expect = 4e-95 Identities = 171/214 (79%), Positives = 187/214 (87%), Gaps = 2/214 (0%) Frame = +2
Query: 11 MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMM--APKKSSSGSIWYGSDRPLYL 184 MA TA S+++ LKPVNELSRKVG EARV M K + S SIWYG+DRP +L Sbjct: 1 MAGATAMHSTALAGQGVLKPVNELSRKVGNVEARVTMRRTVSKSAGSDSIWYGADRPKFL 60
Query: 185 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 364 GPFSG PSYLTGEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELL Sbjct: 61 GPFSGETPSYLTGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELL 120
Query: 365 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 544 AK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAG Sbjct: 121 AKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180
Query: 545 GPLGEVEDPIYPGGSFDPLGLADDPEAFAELXVK 646 GPLGEV DPIYPGGSFDPLGLADDP+ FAEL VK Sbjct: 181 GPLGEVTDPIYPGGSFDPLGLADDPDTFAELKVK 214
|