DK957514
Clone id TST39A01NGRL0028_J04
Library
Length 608
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0028_J04. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GGGCTGTGTGAGCACAAACATGTGGGTTGTATTTGACTTGTGGTCGGTGAAGGTGCTCCG
ATACCACTGAACGCGAGGGCTCTGTGCTTGACACCCACGGTTTTGTGGTGGTCGGTATGC
GCGTGTCTTGTCTGCGGCGTTGTGTGCGTGTGTATATTTCTGTATCTGCGCAAAGATTGT
AGGGTAACGTTGTGCGTGTGTTTACCCGCTGCATCTTCAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGCTGTGCGATGGATTGTGAGGGACTATGCAGCTCATTTTTCGGGCAA
AGCATACAAAGTAGCAGTGTATGTACAGATAGGCCTCATCAGCTACATGGTTGGTCTATG
CGGATTGCTGCAACACACATTCCGCATCACAGAGGCAGTGGAGATGTGTCTCCATGGACT
GGCCACTTGCAGTATCACAGGGATCGGAAGAACATAAATGCAGCCATCAACGGGCGGGTA
TCATCACAGGTGGGCATGGAGGGTAATGGACATGCTGGGCAACAACAGCAGGAGCAGCAG
CAACAACAGCAAGCAGATCTGGTACGCATTAATGGGTACGACAGCTTGGCAGCTCCCAAG
GACCTCAA
■■Homology search results ■■ -
sp_hit_id P22807
Definition sp|P22807|SLOU_DROME Homeobox protein slou OS=Drosophila melanogaster
Align length 64
Score (bit) 32.7
E-value 1.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK957514|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0028_J04, 5'
(608 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P22807|SLOU_DROME Homeobox protein slou OS=Drosophila melanog... 33 1.5
sp|P39980|SIT1_YEAST Siderophore iron transporter 1 OS=Saccharom... 32 3.3
sp|Q90888|MAFB_CHICK Transcription factor MafB OS=Gallus gallus ... 31 5.6
sp|Q6DKE2|DVL3_XENLA Segment polarity protein dishevelled homolo... 31 5.6
sp|Q54KT2|Y8896_DICDI Putative uncharacterized protein DDB_G0287... 30 7.4
sp|Q96N68|CR015_HUMAN Uncharacterized protein C18orf15 OS=Homo s... 30 7.4
sp|P48123|CYF_CYAPA Apocytochrome f OS=Cyanophora paradoxa GN=pe... 30 9.6

>sp|P22807|SLOU_DROME Homeobox protein slou OS=Drosophila
melanogaster GN=slou PE=2 SV=1
Length = 659

Score = 32.7 bits (73), Expect = 1.5
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = -1

Query: 212 AAGKHTHNVTLQSLRRYRNIHTHTTPQTR-HAHTDHHKTVGVKHRALAFSGIGAPSPTTS 36
AA +H H+ Q + + H+H P H H H + RA + S PSP TS
Sbjct: 197 AAQQHMHHHQHQHHQHPAHPHSHQHPHPHPHPHPHPHPSAVFHLRAPSSSSTAPPSPATS 256

Query: 35 QIQP 24
+ P
Sbjct: 257 PLSP 260


>sp|P39980|SIT1_YEAST Siderophore iron transporter 1
OS=Saccharomyces cerevisiae GN=SIT1 PE=2 SV=1
Length = 628

Score = 31.6 bits (70), Expect = 3.3
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2

Query: 278 YAAHFSGKAYKVAVYVQIGLISYMVGLCGLLQHTFRITEAVEMCLHGL 421
YA ++ Y+VA++ + LI+Y GL G +++TF+ H L
Sbjct: 60 YAEMYNRPIYRVALFFSLFLIAYAYGLDGNIRYTFQAYATSSYSQHSL 107


>sp|Q90888|MAFB_CHICK Transcription factor MafB OS=Gallus gallus
GN=MAFB PE=1 SV=1
Length = 311

Score = 30.8 bits (68), Expect = 5.6
Identities = 22/71 (30%), Positives = 28/71 (39%), Gaps = 10/71 (14%)
Frame = -1

Query: 218 EDAAGKHTHNVTLQSLRRYRNIHTHTTPQTRHAHTDHHKTVGVKHRALAFSG-------- 63
E G H + LQ +R H H H H HH+ V H LA SG
Sbjct: 109 EALIGSHQVSQQLQGFESFRAHHHHH----HHHHQHHHQYPAVTHEDLAGSGHPHHHHHH 164

Query: 62 --IGAPSPTTS 36
+P+P+TS
Sbjct: 165 HHQASPTPSTS 175


>sp|Q6DKE2|DVL3_XENLA Segment polarity protein dishevelled homolog
DVL-3 OS=Xenopus laevis GN=dvl3 PE=2 SV=1
Length = 717

Score = 30.8 bits (68), Expect = 5.6
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Frame = -1

Query: 209 AGKHTHNVTLQSLRRYRNIHTHTTPQTRHAHTDHHK---TVGVKHRALAFSGIGAP 51
+G + + T SLRR R + P + H+H HH ++ H +F G P
Sbjct: 599 SGSESDHTTRSSLRRDRAASERSVPASEHSHRSHHSIAHSIRSHHTHQSFGPPGIP 654


>sp|Q54KT2|Y8896_DICDI Putative uncharacterized protein DDB_G0287191
OS=Dictyostelium discoideum GN=DDB_G0287191 PE=4 SV=1
Length = 72

Score = 30.4 bits (67), Expect = 7.4
Identities = 16/60 (26%), Positives = 24/60 (40%)
Frame = -1

Query: 200 HTHNVTLQSLRRYRNIHTHTTPQTRHAHTDHHKTVGVKHRALAFSGIGAPSPTTSQIQPT 21
H ++ + + N H H+ P H H+ HH H L S PSP + P+
Sbjct: 10 HNYHHSYPHHHHHHNYHYHSYPHHHHHHSHHH-----HHHHLPSSPPSPPSPPSPPSPPS 64


>sp|Q96N68|CR015_HUMAN Uncharacterized protein C18orf15 OS=Homo
sapiens GN=C18orf15 PE=2 SV=1
Length = 181

Score = 30.4 bits (67), Expect = 7.4
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2

Query: 140 LCACVYFCICAKIVG*RCACV 202
+CACVY C+C + CAC+
Sbjct: 139 VCACVYVCMCVLVCMCACACM 159


>sp|P48123|CYF_CYAPA Apocytochrome f OS=Cyanophora paradoxa GN=petA
PE=3 SV=1
Length = 321

Score = 30.0 bits (66), Expect = 9.6
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +1

Query: 376 HIPHHRGSGDVSPWTGHLQYHRDRKNINAAINGRVSSQVGMEGNGH 513
H+ +RG G VSP TG + NA++NGR+S +E G+
Sbjct: 186 HVGGNRGRGQVSP-TGE---KTNNTIYNASVNGRISEITKLENGGY 227


tr_hit_id B4J2D7
Definition tr|B4J2D7|B4J2D7_DROGR GH15454 (GH23747) OS=Drosophila grimshawi
Align length 55
Score (bit) 38.5
E-value 0.31
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK957514|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0028_J04, 5'
(608 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B4J2D7|B4J2D7_DROGR GH15454 (GH23747) OS=Drosophila grimshawi... 39 0.31
tr|A8Q8Z6|A8Q8Z6_BRUMA T-cell receptor beta chain ANA 11, putati... 35 3.4
tr|Q15X35|Q15X35_PSEA6 Sensor protein OS=Pseudoalteromonas atlan... 34 5.8
tr|A8QFD1|A8QFD1_BRUMA T-cell receptor beta chain ANA 11, putati... 34 7.5
tr|A0NFZ5|A0NFZ5_ANOGA AGAP010045-PA (Fragment) OS=Anopheles gam... 33 9.8
tr|Q8WYX9|Q8WYX9_HUMAN Putative uncharacterized protein pp10122 ... 33 9.8

>tr|B4J2D7|B4J2D7_DROGR GH15454 (GH23747) OS=Drosophila grimshawi
GN=GH15454 PE=4 SV=1
Length = 128

Score = 38.5 bits (88), Expect = 0.31
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -1

Query: 212 AAGKHTHNVTLQSLRRYRNIHTHTTPQTR-HAHTDHHKTVGVKHRALAFSGIGAP 51
AA HTH+ ++ + + H H+ P + H+H HH H A A +G G P
Sbjct: 43 AAAHHTHHASMHPSHHHHHTHPHSHPHSHPHSHHHHHAHSAHHHLAAAAAGGGMP 97


>tr|A8Q8Z6|A8Q8Z6_BRUMA T-cell receptor beta chain ANA 11, putative
OS=Brugia malayi GN=Bm1_46665 PE=4 SV=1
Length = 130

Score = 35.0 bits (79), Expect = 3.4
Identities = 21/66 (31%), Positives = 27/66 (40%)
Frame = -1

Query: 200 HTHNVTLQSLRRYRNIHTHTTPQTRHAHTDHHKTVGVKHRALAFSGIGAPSPTTSQIQPT 21
HTH T + + HTHT T H HT H T H + P S IQ
Sbjct: 15 HTHTHTHTHTHTHTHTHTHTHTHTLHTHT-HTHTHTHTHTHTHTHNMPTIRPVHSYIQNN 73

Query: 20 CLCSHS 3
+C+H+
Sbjct: 74 KVCAHT 79


>tr|Q15X35|Q15X35_PSEA6 Sensor protein OS=Pseudoalteromonas
atlantica (strain T6c / BAA-1087) GN=Patl_1027 PE=4 SV=1
Length = 359

Score = 34.3 bits (77), Expect = 5.8
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Frame = +1

Query: 349 GWSMRIAATHIPHHRGSGDVSPWTGHLQYHR----DRKNINA 462
G + IA T I HH+G DV W+GH ++ +RK +N+
Sbjct: 318 GLGLSIAQTLIDHHKGKIDVESWSGHTEFTLYIPINRKELNS 359


>tr|A8QFD1|A8QFD1_BRUMA T-cell receptor beta chain ANA 11, putative
(Fragment) OS=Brugia malayi GN=Bm1_53250 PE=4 SV=1
Length = 68

Score = 33.9 bits (76), Expect = 7.5
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -1

Query: 200 HTHNVTLQSLRRYRNIHTHTTPQTRHAHTDHHKTV 96
HTH T + + HTHT HAHTD H +
Sbjct: 31 HTHTHTHTHTHTHTHTHTHTHTTMHHAHTDTHTQI 65


>tr|A0NFZ5|A0NFZ5_ANOGA AGAP010045-PA (Fragment) OS=Anopheles
gambiae GN=AGAP010045 PE=4 SV=1
Length = 91

Score = 33.5 bits (75), Expect = 9.8
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 11/51 (21%)
Frame = +2

Query: 98 RFCGGRYAR-----VLSAALCACVYFCIC------AKIVG*RCACVYPLHL 217
RFC G R +L ++CACV C+C +IV C CV+ LHL
Sbjct: 42 RFCSGVVTRKIGHSLLRISICACVCACVCISSALDGQIV---CVCVFFLHL 89


>tr|Q8WYX9|Q8WYX9_HUMAN Putative uncharacterized protein pp10122
OS=Homo sapiens GN=pp10122 PE=2 SV=1
Length = 400

Score = 33.5 bits (75), Expect = 9.8
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +2

Query: 140 LCACVYFCICAKIVG*RCACVY 205
+C CVY C+CA+I CACVY
Sbjct: 162 VCICVYVCVCARIC--VCACVY 181