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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK957520
Clone id TST39A01NGRL0028_J10
Library
Length 650
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0028_J10. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GGAAGGACCGTGGTCCGTAAACCGACTCTTTTGCATCGCTGCTACCTACAAATCGCATCT
CTCTCTCATACGGAGTAATCTGTGTCTCGGCACGCGACACACACACACACCCCACTCTCA
GTTCCGAATTTGCTGCTCTGGGTTCCTTCCGTCAAGATCATCTGCTCCGCTTGCATTCAC
CTTTCTCATCTCGTGCTCTTTACATGGGCGTCACTGCCGTCAATGCTATGCAGCATGCAG
CTCTTGTCAAGGATCGGCTGTACGCAGGGGACGATCATCTCCATTTCACGCACAGAGGGA
AACAAAGGCTATCGCTTAAGCAATCTTCCCTGAAATGGCCTTCGTCTCCACGCAGACCTC
GGCGTGCTCTTCTTCGTAGAAGCTCAACAGGTCATGCAGCTGCCATGAAGCGCCCAGTTT
CTGTTTCCGATCCTGTGGCTTCCAGCGTATCCAAGCCCTCTGCAGCTCGCAAGCTGCGTT
CTTCTTTCAATCCGTCGACATCTGCAGCTCCAGCATCAGGTATGGAGCCTCAGCAGCTCT
TCGACCTACCTAGCAGAGAAACCCTTTCGAGCTTAAAACAAGAGCTAGAGGATGATCTGG
ATGTGGATTATAGAGAAGCTGCTGCTGTTCTTGAGCACCTCTTCTCAGAG
■■Homology search results ■■ -
sp_hit_id Q9SJA4
Definition sp|Q9SJA4|CNG14_ARATH Probable cyclic nucleotide-gated ion channel 14 OS=Arabidopsis thaliana
Align length 49
Score (bit) 32.3
E-value 2.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK957520|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0028_J10, 5'
         (650 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9SJA4|CNG14_ARATH Probable cyclic nucleotide-gated ion chann...    32   2.2  
sp|P01055|IBB1_SOYBN Bowman-Birk type proteinase inhibitor OS=Gl...    32   2.9  
sp|P09958|FURIN_HUMAN Furin OS=Homo sapiens GN=FURIN PE=1 SV=2         32   3.8  
sp|P23188|FURIN_MOUSE Furin OS=Mus musculus GN=Furin PE=1 SV=1         31   6.4  
sp|Q2UNX5|DCL2_ASPOR Dicer-like protein 2 OS=Aspergillus oryzae ...    31   6.4  
sp|Q9NWQ4|CN118_HUMAN Uncharacterized protein C14orf118 OS=Homo ...    31   6.4  
sp|Q8VEY3|OL958_MOUSE Olfactory receptor 958 OS=Mus musculus GN=...    30   8.4  
sp|P23377|FURIN_RAT Furin OS=Rattus norvegicus GN=Furin PE=1 SV=1      30   8.4  
sp|Q28193|FURIN_BOVIN Furin OS=Bos taurus GN=FURIN PE=1 SV=1           30   8.4  
sp|Q5EA46|CREL1_BOVIN Cysteine-rich with EGF-like domain protein...    30   8.4  

>sp|Q9SJA4|CNG14_ARATH Probable cyclic nucleotide-gated ion channel
           14 OS=Arabidopsis thaliana GN=CNGC14 PE=2 SV=2
          Length = 726

 Score = 32.3 bits (72), Expect = 2.2
 Identities = 19/49 (38%), Positives = 27/49 (55%)
 Frame = -3

Query: 477 AACELQRAWIRWKPQDRKQKLGASWQLHDLLSFYEEEHAEVCVETKAIS 331
           AAC +Q AW R+K    ++KL  S  L +  S Y+EE A     T+ +S
Sbjct: 620 AACFVQVAWRRYK----RKKLAKSLSLAESFSSYDEEEAVAVAATEEMS 664


>sp|P01055|IBB1_SOYBN Bowman-Birk type proteinase inhibitor
           OS=Glycine max PE=1 SV=2
          Length = 110

 Score = 32.0 bits (71), Expect = 2.9
 Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
 Frame = +2

Query: 26  LFCIAATYKSHLSLIRSNLCLGTRHTHTPHSQF-RICCSGFLPSRSSAPLAFTFLISCSL 202
           LF +  T  ++L L +  L + + H H+   +  + CC     ++S+ P        C  
Sbjct: 11  LFLVGGTTSANLRLSKLGLLMKSDHQHSNDDESSKPCCDQCACTKSNPP-------QCRC 63

Query: 203 HGRHCRQCYAACSSC 247
                  C++AC SC
Sbjct: 64  SDMRLNSCHSACKSC 78


>sp|P09958|FURIN_HUMAN Furin OS=Homo sapiens GN=FURIN PE=1 SV=2
          Length = 794

 Score = 31.6 bits (70), Expect = 3.8
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +2

Query: 215 CRQCYAACSSCQGSAVRRGRSSPFHA 292
           C  C+A+C++CQG A+    S P HA
Sbjct: 641 CAPCHASCATCQGPALTDCLSCPSHA 666


>sp|P23188|FURIN_MOUSE Furin OS=Mus musculus GN=Furin PE=1 SV=1
          Length = 793

 Score = 30.8 bits (68), Expect = 6.4
 Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
 Frame = +2

Query: 62  SLIRSNLCLGTRHTHTPHSQFRI--CCSGFLPSRSSAPLAFTFLISCSLHGRHCRQCYAA 235
           +L  S  C+     ++ H +  +  C  GF+P       +    +   +    C  C+A+
Sbjct: 589 TLTSSQACVVCEEGYSLHQKSCVQHCPPGFIPQVLDTHYSTENDVEI-IRASVCTPCHAS 647

Query: 236 CSSCQGSAVRRGRSSPFHA 292
           C++CQG A     S P HA
Sbjct: 648 CATCQGPAPTDCLSCPSHA 666


>sp|Q2UNX5|DCL2_ASPOR Dicer-like protein 2 OS=Aspergillus oryzae
            GN=dcl2 PE=3 SV=1
          Length = 1377

 Score = 30.8 bits (68), Expect = 6.4
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +2

Query: 86   LGTRHTHTPHSQFRICCSGFLPSRSSAPLAFTFLISCSLHGRHCR 220
            +G  +    HS+ +IC   FLP  +  PL    LI+ + HGR  R
Sbjct: 1044 IGAAYLDGGHSKAQICTHCFLPEVNRQPLDIPSLITQTEHGRTAR 1088


>sp|Q9NWQ4|CN118_HUMAN Uncharacterized protein C14orf118 OS=Homo
           sapiens GN=C14orf118 PE=1 SV=2
          Length = 453

 Score = 30.8 bits (68), Expect = 6.4
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +3

Query: 231 QHAALVKDRLYAGDDHLHFTHRG 299
           QH AL   ++Y GD H+H T RG
Sbjct: 392 QHTALPDRQMYTGDHHVHVTSRG 414


>sp|Q8VEY3|OL958_MOUSE Olfactory receptor 958 OS=Mus musculus
           GN=Olfr958 PE=2 SV=1
          Length = 312

 Score = 30.4 bits (67), Expect = 8.4
 Identities = 19/65 (29%), Positives = 32/65 (49%)
 Frame = +1

Query: 112 PLSVPNLLLWVPSVKIICSACIHLSHLVLFTWASLPSMLCSMQLLSRIGCTQGTIISISR 291
           P  V +    +P++  + SA   L+  V FT   L S++C + +L        +I+SI  
Sbjct: 171 PNEVDHFFCDIPAILPLASADTSLAQRVSFTNVGLVSLVCFLLILLSYTRITISILSIQS 230

Query: 292 TEGNK 306
           TEG +
Sbjct: 231 TEGRQ 235


>sp|P23377|FURIN_RAT Furin OS=Rattus norvegicus GN=Furin PE=1 SV=1
          Length = 793

 Score = 30.4 bits (67), Expect = 8.4
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 215 CRQCYAACSSCQGSAVRRGRSSPFHA 292
           C  C+A+C++CQG A     S P HA
Sbjct: 641 CTPCHASCATCQGPAPTDCLSCPSHA 666


>sp|Q28193|FURIN_BOVIN Furin OS=Bos taurus GN=FURIN PE=1 SV=1
          Length = 797

 Score = 30.4 bits (67), Expect = 8.4
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 215 CRQCYAACSSCQGSAVRRGRSSPFHA 292
           C  C+A+C++CQG A     S P HA
Sbjct: 641 CTPCHASCATCQGPAPTDCLSCPSHA 666


>sp|Q5EA46|CREL1_BOVIN Cysteine-rich with EGF-like domain protein 1
           OS=Bos taurus GN=CRELD1 PE=2 SV=1
          Length = 420

 Score = 30.4 bits (67), Expect = 8.4
 Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
 Frame = +2

Query: 215 CRQCYAACSSCQGSAVRR-GRSSPFHAQRETKAIA*AIFPEMAFVSTQTSACSSS*KLNR 391
           CR C  AC  C G+   R  + SP + Q  +K         +     +T+ C      N+
Sbjct: 271 CRDCAKACLGCMGAGPGRCKKCSPGYQQVGSKC--------LDVDECETAVCPGE---NQ 319

Query: 392 SCSCHEAPSFCFRSCGFQRIQALC 463
            C   E    C  + G+++++ +C
Sbjct: 320 QCENTEGSYRCICADGYKQMEGIC 343
tr_hit_id B0W487
Definition tr|B0W487|B0W487_CULQU Putative uncharacterized protein OS=Culex quinquefasciatus
Align length 83
Score (bit) 36.2
E-value 1.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK957520|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0028_J10, 5'
         (650 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B0W487|B0W487_CULQU Putative uncharacterized protein OS=Culex...    36   1.8  
tr|Q2K797|Q2K797_RHIEC Hypothetical conserved protein OS=Rhizobi...    36   2.3  
tr|Q22Z13|Q22Z13_TETTH Zinc finger domain, LSD1 subclass family ...    36   2.3  
tr|Q22D56|Q22D56_TETTH Insect antifreeze protein OS=Tetrahymena ...    36   2.3  
tr|A0CLQ4|A0CLQ4_PARTE Chromosome undetermined scaffold_201, who...    35   3.0  
tr|A0C1C3|A0C1C3_PARTE Chromosome undetermined scaffold_141, who...    35   3.0  
tr|Q1JTH9|Q1JTH9_TOXGO Hyothetical protein OS=Toxoplasma gondii ...    35   4.0  
tr|Q22BL5|Q22BL5_TETTH Insect antifreeze protein OS=Tetrahymena ...    35   5.2  
tr|Q9NCQ8|Q9NCQ8_9CUCU Antifreeze protein 11 OS=Dendroides canad...    34   8.8  

>tr|B0W487|B0W487_CULQU Putative uncharacterized protein OS=Culex
           quinquefasciatus GN=CpipJ_CPIJ001847 PE=4 SV=1
          Length = 1170

 Score = 36.2 bits (82), Expect = 1.8
 Identities = 26/83 (31%), Positives = 37/83 (44%)
 Frame = +2

Query: 59  LSLIRSNLCLGTRHTHTPHSQFRICCSGFLPSRSSAPLAFTFLISCSLHGRHCRQCYAAC 238
           +S  RSN+ L   H H  HS+      G   S SS+  + +    C  H R   +CY  C
Sbjct: 428 ISRSRSNVELNRSHHHHHHSK------GRRSSSSSSATSESSSEDCCRHTRRKHRCYRKC 481

Query: 239 SSCQGSAVRRGRSSPFHAQRETK 307
           SS + S   R +    H + E+K
Sbjct: 482 SSSKSS---RSKDRSSHRREESK 501


>tr|Q2K797|Q2K797_RHIEC Hypothetical conserved protein OS=Rhizobium
           etli (strain CFN 42 / ATCC 51251) GN=RHE_CH02512 PE=4
           SV=1
          Length = 110

 Score = 35.8 bits (81), Expect = 2.3
 Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
 Frame = +2

Query: 41  ATYKSHLSLIRSN-LCLGTRHTHTPHSQFRICCSGFLPSRSSAPLAFTFLISCSLHGRH- 214
           A Y   LS+   + L LG  HT  PH +  + C+     R+SA     F++  S H +H 
Sbjct: 17  ACYSECLSMAMGHCLELGGEHTKPPHFKLMMVCAEI--CRTSA----HFMLIGSEHHKHV 70

Query: 215 CRQCYAACSSCQGSAVRRG 271
           CR+C   C+ C     R G
Sbjct: 71  CRECAEICAQCADDCERIG 89


>tr|Q22Z13|Q22Z13_TETTH Zinc finger domain, LSD1 subclass family
            protein OS=Tetrahymena thermophila SB210
            GN=TTHERM_00117540 PE=4 SV=2
          Length = 2236

 Score = 35.8 bits (81), Expect = 2.3
 Identities = 33/108 (30%), Positives = 45/108 (41%), Gaps = 8/108 (7%)
 Frame = +2

Query: 215  CRQCYAACSSCQGSAVRR---GRSSPFHAQRETKAIA*AIFPEMAFVSTQTSACSSS*KL 385
            C+QC ++C SC GS        RS  F    + K+I    +    F  TQT+ C      
Sbjct: 777  CKQCDSSCKSCNGSTASNCTDCRSGLFLQNNQCKSICDGSY----FGMTQTNTCQ----- 827

Query: 386  NRSCSCHEAPSFCFRSCGFQRIQALCSSQAAFFF-----QSVDICSSS 514
                 CH +   CF SC    I    S QA  +F     Q V +C+S+
Sbjct: 828  ----PCHLS---CF-SCNGSSINNCLSCQAPRYFDPTTNQCVLVCNSN 867


>tr|Q22D56|Q22D56_TETTH Insect antifreeze protein OS=Tetrahymena
            thermophila SB210 GN=TTHERM_01002620 PE=4 SV=1
          Length = 4016

 Score = 35.8 bits (81), Expect = 2.3
 Identities = 39/139 (28%), Positives = 57/139 (41%), Gaps = 9/139 (6%)
 Frame = +2

Query: 131  CCSGFLPSRSSAPLAFTFLISCSLHGRHCRQCYAACSSCQGSAVRRGRSSPFHAQRETKA 310
            C SGF  S S   L F       L G  C QC ++C SC G     G ++     +    
Sbjct: 2527 CYSGFFLSSSQCTLCFQ---GYYLDGNQCLQCDSSCLSCNGP----GPNNCIVCSQPN-- 2577

Query: 311  IA*AIFPEMAFVST-QTSACSSS*KLNR----SCSCHEAPSFCFRSCGFQ----RIQALC 463
                     +F+ST Q + C+S   L++        ++    C RSCG        Q +C
Sbjct: 2578 ---------SFISTIQNNICTSLCDLSQGQFIDKYTNQQQQIC-RSCGSLCQTCDAQNIC 2627

Query: 464  SSQAAFFFQSVDICSSSIR 520
            +S    FF S ++CS  I+
Sbjct: 2628 TSCVQGFFLSGNVCSPCIQ 2646


>tr|A0CLQ4|A0CLQ4_PARTE Chromosome undetermined scaffold_201, whole
           genome shotgun sequence OS=Paramecium tetraurelia
           GN=GSPATT00038646001 PE=4 SV=1
          Length = 750

 Score = 35.4 bits (80), Expect = 3.0
 Identities = 27/114 (23%), Positives = 43/114 (37%), Gaps = 5/114 (4%)
 Frame = +2

Query: 179 TFLISCSLHG-----RHCRQCYAACSSCQGSAVRRGRSSPFHAQRETKAIA*AIFPEMAF 343
           T  +SC +         C+ C   C  C G   R    SP +     K I    +  +  
Sbjct: 599 TECLSCEIQNYLVANNKCQTCSKGCKQCSGYNDRCFECSPGYFLENLKCIQCNAYCRLCT 658

Query: 344 VSTQTSACSSS*KLNRSCSCHEAPSFCFRSCGFQRIQALCSSQAAFFFQSVDIC 505
                ++C S   LN   +C   P  C   C FQ    +C++ A+ +F++   C
Sbjct: 659 ARYTCTSCPSGYYLNFD-NCLPCPIEC-SDCTFQAGSIICNTCASGYFKNSSTC 710


>tr|A0C1C3|A0C1C3_PARTE Chromosome undetermined scaffold_141, whole
           genome shotgun sequence OS=Paramecium tetraurelia
           GN=GSPATT00034066001 PE=4 SV=1
          Length = 1650

 Score = 35.4 bits (80), Expect = 3.0
 Identities = 29/115 (25%), Positives = 46/115 (40%)
 Frame = +2

Query: 29  FCIAATYKSHLSLIRSNLCLGTRHTHTPHSQFRICCSGFLPSRSSAPLAFTFLISCSLHG 208
           FC     + + S+ + N C+G   T    SQ  +C +G+   +                 
Sbjct: 494 FCTGCIDEFYESIGQCNKCIGNCQTCPNSSQCHVCNTGYFVDK----------------- 536

Query: 209 RHCRQCYAACSSCQGSAVRRGRSSPFHAQRETKAIA*AIFPEMAFVSTQTSACSS 373
            +C  C + C+SC GSA       P  +  + K ++    P    V+T TS CSS
Sbjct: 537 MNCIACNSQCTSCSGSASECYSCKPGFSLIQNKCVS-CQTPCYTCVNT-TSTCSS 589


>tr|Q1JTH9|Q1JTH9_TOXGO Hyothetical protein OS=Toxoplasma gondii RH
            GN=TgIa.0350c PE=4 SV=1
          Length = 1821

 Score = 35.0 bits (79), Expect = 4.0
 Identities = 40/173 (23%), Positives = 65/173 (37%), Gaps = 3/173 (1%)
 Frame = +2

Query: 29   FCIAATYKSHLSLIRSNLCLGTRHTHTPHSQFRICCSGFLPSRSSAPLAFTFLISCSLHG 208
            FC ++++ S      S+ C G   +    S    C      S S +  +F+   S S   
Sbjct: 523  FCSSSSFSSSSFSCSSSACSGCSFSSCSSSSCSGCLFSSCSSSSWSGCSFSSCSSSSCSS 582

Query: 209  RHCRQC-YAAC--SSCQGSAVRRGRSSPFHAQRETKAIA*AIFPEMAFVSTQTSACSSS* 379
              C  C +++C  SSC G +     SS +     +   + +     +F S  +S+CS   
Sbjct: 583  SSCSGCSFSSCSSSSCSGCSSSSCSSSSWSGCSFSSCSS-SSCSGCSFSSCSSSSCS--- 638

Query: 380  KLNRSCSCHEAPSFCFRSCGFQRIQALCSSQAAFFFQSVDICSSSIRYGASAA 538
                 CS     S  +  C F    +   S  +F       CSSS   G S++
Sbjct: 639  ----GCSSSSCSSSSWSGCSFSSCSSSSCSGCSF-----SSCSSSSCSGCSSS 682


>tr|Q22BL5|Q22BL5_TETTH Insect antifreeze protein OS=Tetrahymena
            thermophila SB210 GN=TTHERM_01098980 PE=4 SV=1
          Length = 3751

 Score = 34.7 bits (78), Expect = 5.2
 Identities = 19/82 (23%), Positives = 38/82 (46%)
 Frame = +2

Query: 197  SLHGRHCRQCYAACSSCQGSAVRRGRSSPFHAQRETKAIA*AIFPEMAFVSTQTSACSSS 376
            S  G+ C QC ++CS+C GS  +   + P ++          +  +  + +TQT+ C+S 
Sbjct: 3198 SSDGKTCAQCDSSCSTCSGSGTKACNTCPANS---NLVAGQCLCAQGYYRNTQTNQCTSC 3254

Query: 377  *KLNRSCSCHEAPSFCFRSCGF 442
              ++    C  + +    S G+
Sbjct: 3255 NTISNCLQCSSSTTCTQCSTGY 3276


>tr|Q9NCQ8|Q9NCQ8_9CUCU Antifreeze protein 11 OS=Dendroides
           canadensis GN=afp-11 PE=2 SV=1
          Length = 148

 Score = 33.9 bits (76), Expect = 8.8
 Identities = 19/69 (27%), Positives = 29/69 (42%)
 Frame = +2

Query: 206 GRHCRQCYAACSSCQGSAVRRGRSSPFHAQRETKAIA*AIFPEMAFVSTQTSACSSS*KL 385
           G  CR C AAC+SCQ     R   +      + +    +     A   T++S C+++   
Sbjct: 30  GSDCRSCTAACTSCQNCPNARSACTGSTVCHKAQTCTGSTGCYNAMTCTRSSECNNAQTC 89

Query: 386 NRSCSCHEA 412
             S  CH A
Sbjct: 90  TGSHDCHNA 98