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NBDC - LSDB Archive
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DK957527
Clone id TST39A01NGRL0028_J17
Library
Length 658
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0028_J17. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GGCAGAGGGACTAAGGAGGTCAGAAGATCGGCCGCAGCGATGGCCAAGTCTGCAACGAGA
GCCCCTCGCAACAAGGAGCTAGTGCGTGGCGTTGGGCGCCTCTCACGATCGCGTGTCTAC
CACAAGCGCGGCCTGTGGGCAATTAAGGCCAAGCATGGTGGATCCTTTCCGACCCATGCC
AAGAAGGAGGTGGCCGCCCCAGCTGCCGCAAAGGCACCCAAGTTCTACCCAGCAGACGAT
GTGCCGAAGCCTCTGTGCAACAAGCGGGTAATCAAGAAGACCAAGATCAGGGCCAGCATT
ACCCCAGGAACAGTGCTCATCTTATTGGCTGGTCACTTCAAGGGCAAGCGTGCTGTCTTC
TTGAAGCAGCTAGATTCTGGCTTGCTACTGGTTACAGGGCCTTTCAAACTGAATGGAGTT
CCTCTCCGCAGAGTCAACCAAGCATATGTGATCGCCACATCCACTAAGCTTGATGTCAGC
TCGGTAGATGCTAGTAAAATCTCCGATTCTTATTTTAAAAGAGAAGAAGTGAAGAAGAAA
AAGGGGGAGAGCGAGTTTTTCGAGGGCGAGAAAGAGGACTCAAAGTCCGTGCCAGCTGAG
AAGAAGGAAGAACAAAAAGCTGTTGATTCCAAGCTGTTGGCGGTTGTAGAGTCTATCC
■■Homology search results ■■ -
sp_hit_id P34091
Definition sp|P34091|RL6_MESCR 60S ribosomal protein L6 OS=Mesembryanthemum crystallinum
Align length 181
Score (bit) 188.0
E-value 2.0e-47
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK957527|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0028_J17, 5'
         (658 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P34091|RL6_MESCR 60S ribosomal protein L6 OS=Mesembryanthemum...   188   2e-47
sp|Q9FZ76|RL61_ARATH 60S ribosomal protein L6-1 OS=Arabidopsis t...   183   8e-46
sp|Q9C9C5|RL63_ARATH 60S ribosomal protein L6-3 OS=Arabidopsis t...   181   3e-45
sp|Q9C9C6|RL62_ARATH 60S ribosomal protein L6-2 OS=Arabidopsis t...   179   1e-44
sp|Q54D63|RL6_DICDI 60S ribosomal protein L6 OS=Dictyostelium di...   120   5e-27
sp|P05739|RL6B_YEAST 60S ribosomal protein L6-B OS=Saccharomyces...   116   1e-25
sp|Q6QMZ4|RL6_CHILA 60S ribosomal protein L6 OS=Chinchilla lanig...   114   5e-25
sp|P79071|RL6_SCHPO 60S ribosomal protein L6 OS=Schizosaccharomy...   113   8e-25
sp|Q2YGT9|RL6_PIG 60S ribosomal protein L6 OS=Sus scrofa GN=RPL6...   113   8e-25
sp|Q58DQ3|RL6_BOVIN 60S ribosomal protein L6 OS=Bos taurus GN=RP...   113   8e-25
sp|Q02878|RL6_HUMAN 60S ribosomal protein L6 OS=Homo sapiens GN=...   113   1e-24
sp|P21533|RL6_RAT 60S ribosomal protein L6 OS=Rattus norvegicus ...   111   3e-24
sp|P47911|RL6_MOUSE 60S ribosomal protein L6 OS=Mus musculus GN=...   110   5e-24
sp|Q02326|RL6A_YEAST 60S ribosomal protein L6-A OS=Saccharomyces...   109   1e-23
sp|P47991|RL6_CAEEL 60S ribosomal protein L6 OS=Caenorhabditis e...    98   4e-20
sp|A8ABY5|RL14E_IGNH4 50S ribosomal protein L14e OS=Ignicoccus h...    47   1e-04
sp|Q4JAJ9|RL14E_SULAC 50S ribosomal protein L14e OS=Sulfolobus a...    46   2e-04
sp|A1RTL6|RL14E_PYRIL 50S ribosomal protein L14e OS=Pyrobaculum ...    43   0.001
sp|A4WH36|RL14E_PYRAR 50S ribosomal protein L14e OS=Pyrobaculum ...    42   0.002
sp|A3MS76|RL14E_PYRCJ 50S ribosomal protein L14e OS=Pyrobaculum ...    42   0.003
sp|Q8ZYB4|RL14E_PYRAE 50S ribosomal protein L14e OS=Pyrobaculum ...    42   0.003
sp|Q975L7|RL14E_SULTO 50S ribosomal protein L14e OS=Sulfolobus t...    42   0.004
sp|Q980C1|RL14E_SULSO 50S ribosomal protein L14e OS=Sulfolobus s...    42   0.004
sp|A4YCT0|RL14E_METS5 50S ribosomal protein L14e OS=Metallosphae...    42   0.004
sp|A3DND4|RL14E_STAMF 50S ribosomal protein L14e OS=Staphylother...    41   0.006
sp|Q9YDD7|RL14E_AERPE 50S ribosomal protein L14e OS=Aeropyrum pe...    39   0.019
sp|Q8TX43|RL14E_METKA 50S ribosomal protein L14e OS=Methanopyrus...    39   0.024
sp|P59937|RL14E_PYRHO 50S ribosomal protein L14e OS=Pyrococcus h...    35   0.35 
sp|Q8U2L5|RL14E_PYRFU 50S ribosomal protein L14e OS=Pyrococcus f...    35   0.35 
sp|Q9UZJ5|RL14E_PYRAB 50S ribosomal protein L14e OS=Pyrococcus a...    35   0.35 

>sp|P34091|RL6_MESCR 60S ribosomal protein L6 OS=Mesembryanthemum
           crystallinum GN=RPL6 PE=2 SV=1
          Length = 234

 Score =  188 bits (478), Expect = 2e-47
 Identities = 103/181 (56%), Positives = 114/181 (62%), Gaps = 1/181 (0%)
 Frame = +1

Query: 118 YHKRGLWAIKAKHGGSFPTHXXXXXXXXXXXXXXXXXXXDDVPKPLCNKRVIKKTKIRAS 297
           YHKRGLWAIKAK+GG FP H                   DDV KPL NKR  K TK+RAS
Sbjct: 30  YHKRGLWAIKAKNGGVFPKHAPKSADSKAVEKPPKFYPADDVKKPLINKRKPKPTKLRAS 89

Query: 298 ITPGTVLILLAGHFKGKRAVFLKQLDSGLLLVTGPFKLNGVPLRRVNQAYVIATSTKLDV 477
           ITPGTVLI+LAG FKGKR VFLKQL SGLLLVTGPFK+NGVPLRRVNQAYVIATSTK+D+
Sbjct: 90  ITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGPFKVNGVPLRRVNQAYVIATSTKVDI 149

Query: 478 SSVDASKISDSYXXXXXXXXXXXXXXXXXXXXXXXXXV-PAEKKEEQKAVDSKLLAVVES 654
           S V+  K  D Y                         V P EKK++QKAVD  LL  +E 
Sbjct: 150 SGVNVEKFDDKYFGKKAEKKNKKGEGEFFEAEKKEVNVLPQEKKDDQKAVDVALLKAIEG 209

Query: 655 I 657
           +
Sbjct: 210 V 210


>sp|Q9FZ76|RL61_ARATH 60S ribosomal protein L6-1 OS=Arabidopsis
           thaliana GN=RPL6A PE=2 SV=1
          Length = 233

 Score =  183 bits (464), Expect = 8e-46
 Identities = 97/181 (53%), Positives = 114/181 (62%), Gaps = 1/181 (0%)
 Frame = +1

Query: 118 YHKRGLWAIKAKHGGSFPTHXXXXXXXXXXXXXXXXXXXDDVPKPLCNKRVIKKTKIRAS 297
           YHKRGLWAIKAK+GG FP H                   +DV KPL N+R  K TK++AS
Sbjct: 29  YHKRGLWAIKAKNGGVFPRHDAQPKVDAPVEKPAKFYPAEDVKKPLVNRRKPKPTKLKAS 88

Query: 298 ITPGTVLILLAGHFKGKRAVFLKQLDSGLLLVTGPFKLNGVPLRRVNQAYVIATSTKLDV 477
           ITPGTVLI+LAG FKGKR VFLKQL SGLLLVTGPFK+NGVPLRRVNQAYVI TSTK+D+
Sbjct: 89  ITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGPFKINGVPLRRVNQAYVIGTSTKIDI 148

Query: 478 SSVDASKISDSY-XXXXXXXXXXXXXXXXXXXXXXXXXVPAEKKEEQKAVDSKLLAVVES 654
           S V+  K  D Y                          +P EKKE+QK VD+ L+  +E+
Sbjct: 149 SGVNTEKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKKEIPQEKKEDQKTVDAALIKSIEA 208

Query: 655 I 657
           +
Sbjct: 209 V 209


>sp|Q9C9C5|RL63_ARATH 60S ribosomal protein L6-3 OS=Arabidopsis
           thaliana GN=RPL6C PE=2 SV=1
          Length = 233

 Score =  181 bits (459), Expect = 3e-45
 Identities = 97/181 (53%), Positives = 113/181 (62%), Gaps = 1/181 (0%)
 Frame = +1

Query: 118 YHKRGLWAIKAKHGGSFPTHXXXXXXXXXXXXXXXXXXXDDVPKPLCNKRVIKKTKIRAS 297
           YHKRGLWAIKAK+GG FP H                   +DV KPL N+R  K TK+RAS
Sbjct: 29  YHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFYPAEDVKKPLPNRRTAKPTKLRAS 88

Query: 298 ITPGTVLILLAGHFKGKRAVFLKQLDSGLLLVTGPFKLNGVPLRRVNQAYVIATSTKLDV 477
           ITPGTVLI+LAG FKGKR VFLKQL SGLLLVTGPFK+NGVPLRRVNQAYVI TSTK+D+
Sbjct: 89  ITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFKINGVPLRRVNQAYVIGTSTKVDI 148

Query: 478 SSVDASKISDSY-XXXXXXXXXXXXXXXXXXXXXXXXXVPAEKKEEQKAVDSKLLAVVES 654
           S V   K  D Y                          +P  KK++QKAVD+ L+  +E+
Sbjct: 149 SGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKKEIPQVKKDDQKAVDAALIKAIEA 208

Query: 655 I 657
           +
Sbjct: 209 V 209


>sp|Q9C9C6|RL62_ARATH 60S ribosomal protein L6-2 OS=Arabidopsis
           thaliana GN=RPL6B PE=2 SV=1
          Length = 233

 Score =  179 bits (454), Expect = 1e-44
 Identities = 96/181 (53%), Positives = 112/181 (61%), Gaps = 1/181 (0%)
 Frame = +1

Query: 118 YHKRGLWAIKAKHGGSFPTHXXXXXXXXXXXXXXXXXXXDDVPKPLCNKRVIKKTKIRAS 297
           YHKRGLWAIKAK+GG FP H                   +DV KPL N+R  K  K+RAS
Sbjct: 29  YHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFYPAEDVKKPLPNRRTAKPAKLRAS 88

Query: 298 ITPGTVLILLAGHFKGKRAVFLKQLDSGLLLVTGPFKLNGVPLRRVNQAYVIATSTKLDV 477
           ITPGTVLI+LAG FKGKR VFLKQL SGLLLVTGPFK+NGVPLRRVNQAYVI TSTK+D+
Sbjct: 89  ITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFKINGVPLRRVNQAYVIGTSTKVDI 148

Query: 478 SSVDASKISDSY-XXXXXXXXXXXXXXXXXXXXXXXXXVPAEKKEEQKAVDSKLLAVVES 654
           S V   K  D Y                          +P  KK++QKAVD+ L+  +E+
Sbjct: 149 SGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKKEIPQGKKDDQKAVDAALIKAIEA 208

Query: 655 I 657
           +
Sbjct: 209 V 209


>sp|Q54D63|RL6_DICDI 60S ribosomal protein L6 OS=Dictyostelium
           discoideum GN=rpl6 PE=3 SV=1
          Length = 236

 Score =  120 bits (302), Expect = 5e-27
 Identities = 69/132 (52%), Positives = 89/132 (67%), Gaps = 2/132 (1%)
 Frame = +1

Query: 262 KRVIKKTKIRASITPGTVLILLAGHFKGKRAVFLKQLDSGLLLVTGPFKLNGVPLRRVNQ 441
           K+V +K  +R SITPGTVLI+LAG F GKR V LKQLDSGL+L+TGPFK+NGVPLRR++Q
Sbjct: 79  KKVQQKVALRKSITPGTVLIILAGRFAGKRVVALKQLDSGLILITGPFKVNGVPLRRIDQ 138

Query: 442 AYVIATSTKLDVSSVD-ASKISDSYXXXXXXXXXXXXXXXXXXXXXXXXXVPAEKK-EEQ 615
            YVIATSTK+DVSSV  A+ I+D+Y                           A+ +  +Q
Sbjct: 139 RYVIATSTKIDVSSVKVAATINDAYFAAEKKSTTKSEGAFFSDEKKAEKKKIADSRVADQ 198

Query: 616 KAVDSKLLAVVE 651
           K+VDS +LAV++
Sbjct: 199 KSVDSAILAVLK 210


>sp|P05739|RL6B_YEAST 60S ribosomal protein L6-B OS=Saccharomyces
           cerevisiae GN=RPL6B PE=1 SV=4
          Length = 176

 Score =  116 bits (290), Expect = 1e-25
 Identities = 63/139 (45%), Positives = 82/139 (58%)
 Frame = +1

Query: 235 DDVPKPLCNKRVIKKTKIRASITPGTVLILLAGHFKGKRAVFLKQLDSGLLLVTGPFKLN 414
           +DV  P   ++ ++  K+RAS+ PGTVLILLAG F+GKR V+LK L+   LLVTGPFK+N
Sbjct: 13  EDVAAPKKTRKAVRPQKLRASLVPGTVLILLAGRFRGKRVVYLKHLEDNTLLVTGPFKVN 72

Query: 415 GVPLRRVNQAYVIATSTKLDVSSVDASKISDSYXXXXXXXXXXXXXXXXXXXXXXXXXVP 594
           GVPLRRVN  YVIATSTK+ V  V+  K +  Y                         + 
Sbjct: 73  GVPLRRVNARYVIATSTKVSVEGVNVEKFNVEY-FAKEKLTKKEKKEANLFPEQQTKEIK 131

Query: 595 AEKKEEQKAVDSKLLAVVE 651
            E+ E+QK VD  LLA ++
Sbjct: 132 TERVEDQKVVDKALLAEIK 150


>sp|Q6QMZ4|RL6_CHILA 60S ribosomal protein L6 OS=Chinchilla lanigera
           GN=RPL6 PE=2 SV=3
          Length = 288

 Score =  114 bits (285), Expect = 5e-25
 Identities = 66/146 (45%), Positives = 92/146 (63%), Gaps = 5/146 (3%)
 Frame = +1

Query: 235 DDVPKPLCN--KRVIKK--TKIRASITPGTVLILLAGHFKGKRAVFLKQLDSGLLLVTGP 402
           +DVP+ L +  K+   +   K+RASITPGTVLI+L G  +GKR VFLKQL SGLLLVTGP
Sbjct: 119 EDVPRKLLSHGKKPFSQHVRKLRASITPGTVLIILTGRHRGKRVVFLKQLASGLLLVTGP 178

Query: 403 FKLNGVPLRRVNQAYVIATSTKLDVSSVDASK-ISDSYXXXXXXXXXXXXXXXXXXXXXX 579
             LN VPLRR +Q +VIATSTK+D+S+V   K ++D+Y                      
Sbjct: 179 LNLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFKKKKLRKPRHQEGEIFDTEKE 238

Query: 580 XXXVPAEKKEEQKAVDSKLLAVVESI 657
              +  ++K +QKAVDS++L  ++++
Sbjct: 239 RYQISEQRKVDQKAVDSQILPKIKAV 264


>sp|P79071|RL6_SCHPO 60S ribosomal protein L6 OS=Schizosaccharomyces
           pombe GN=rpl6 PE=1 SV=2
          Length = 195

 Score =  113 bits (283), Expect = 8e-25
 Identities = 64/142 (45%), Positives = 88/142 (61%), Gaps = 1/142 (0%)
 Frame = +1

Query: 235 DDVPKPLCNKRVIKKTKIRASITPGTVLILLAGHFKGKRAVFLKQLDSGLLLVTGPFKLN 414
           ++VPK    ++ ++ TK+RAS+ PGTV ILLAG F+GKR V L QL+   L+VTGP+K+N
Sbjct: 33  ENVPKKA--RKAVRPTKLRASLAPGTVCILLAGRFRGKRVVVLSQLED-TLVVTGPYKVN 89

Query: 415 GVPLRRVNQAYVIATST-KLDVSSVDASKISDSYXXXXXXXXXXXXXXXXXXXXXXXXXV 591
           GVP+RRVN  YVIATS  K+DVS V   K + +Y                         +
Sbjct: 90  GVPIRRVNHRYVIATSAPKIDVSGVSVEKFTKAYFAKQKRSGPVKKDEAFFAENAPKNAL 149

Query: 592 PAEKKEEQKAVDSKLLAVVESI 657
           PAE+  +QKAVD+KLL  +++I
Sbjct: 150 PAERIADQKAVDAKLLPAIKAI 171


>sp|Q2YGT9|RL6_PIG 60S ribosomal protein L6 OS=Sus scrofa GN=RPL6
           PE=2 SV=3
          Length = 284

 Score =  113 bits (283), Expect = 8e-25
 Identities = 64/146 (43%), Positives = 91/146 (62%), Gaps = 5/146 (3%)
 Frame = +1

Query: 235 DDVPKPLCN--KRVIKK--TKIRASITPGTVLILLAGHFKGKRAVFLKQLDSGLLLVTGP 402
           +DVP+ L +  K+   K   K+RASITPGT+LI+L G  +GKR +FLKQL SGLLLVTGP
Sbjct: 115 EDVPRKLLSHGKKPFSKHVRKLRASITPGTILIILTGRHRGKRVIFLKQLSSGLLLVTGP 174

Query: 403 FKLNGVPLRRVNQAYVIATSTKLDVSSVDASK-ISDSYXXXXXXXXXXXXXXXXXXXXXX 579
             LN VPLRR +Q +VIATSTK+D+S V   + ++D+Y                      
Sbjct: 175 LSLNRVPLRRTHQKFVIATSTKIDISGVKIPEHLTDAYFKKKKLRKPRHQEGEIFDTEKE 234

Query: 580 XXXVPAEKKEEQKAVDSKLLAVVESI 657
              +  ++K +QKAVDS++L  ++++
Sbjct: 235 KYEISEQRKVDQKAVDSQILRRIKAV 260


>sp|Q58DQ3|RL6_BOVIN 60S ribosomal protein L6 OS=Bos taurus GN=RPL6
           PE=2 SV=3
          Length = 287

 Score =  113 bits (283), Expect = 8e-25
 Identities = 65/146 (44%), Positives = 91/146 (62%), Gaps = 5/146 (3%)
 Frame = +1

Query: 235 DDVPKPLCN--KRVIKK--TKIRASITPGTVLILLAGHFKGKRAVFLKQLDSGLLLVTGP 402
           +DVP+ L +  K+   K   K+RASITPGT+LI+L G  +GKR VFLKQL SGLLLVTGP
Sbjct: 118 EDVPRKLLSHGKKPFSKHVRKLRASITPGTILIILTGRHRGKRVVFLKQLGSGLLLVTGP 177

Query: 403 FKLNGVPLRRVNQAYVIATSTKLDVSSVDASK-ISDSYXXXXXXXXXXXXXXXXXXXXXX 579
             LN VPLRR +Q +VIATSTK+D+S V   + ++D+Y                      
Sbjct: 178 LSLNRVPLRRTHQKFVIATSTKIDISGVKIPEHLTDTYFKKKKLRKPRHQEGEIFDTERE 237

Query: 580 XXXVPAEKKEEQKAVDSKLLAVVESI 657
              +  ++K +QKAVDS++L  ++++
Sbjct: 238 KYEITEQRKVDQKAVDSQILRRIKAV 263
tr_hit_id A9S9Y8
Definition tr|A9S9Y8|A9S9Y8_PHYPA 60S ribosomal protein L6 OS=Physcomitrella patens subsp. patens
Align length 181
Score (bit) 200.0
E-value 6.0e-50
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK957527|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0028_J17, 5'
         (658 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9S9Y8|A9S9Y8_PHYPA 60S ribosomal protein L6 OS=Physcomitrell...   200   6e-50
tr|A9NNE0|A9NNE0_PICSI 60S ribosomal protein L6 OS=Picea sitchen...   200   6e-50
tr|A9SVY6|A9SVY6_PHYPA 60S ribosomal protein L6 OS=Physcomitrell...   200   7e-50
tr|A9NZV1|A9NZV1_PICSI 60S ribosomal protein L6 OS=Picea sitchen...   200   7e-50
tr|A9NLS7|A9NLS7_PICSI 60S ribosomal protein L6 OS=Picea sitchen...   200   7e-50
tr|A9SVY4|A9SVY4_PHYPA 60S ribosomal protein L6 OS=Physcomitrell...   199   1e-49
tr|A9NZI5|A9NZI5_PICSI 60S ribosomal protein L6 OS=Picea sitchen...   197   4e-49
tr|A9RUW5|A9RUW5_PHYPA 60S ribosomal protein L6 OS=Physcomitrell...   195   2e-48
tr|A7PVT5|A7PVT5_VITVI 60S ribosomal protein L6 OS=Vitis vinifer...   192   1e-47
tr|B7FH28|B7FH28_MEDTR Putative uncharacterized protein OS=Medic...   191   3e-47
tr|A5BXF5|A5BXF5_VITVI 60S ribosomal protein L6 OS=Vitis vinifer...   189   1e-46
tr|A7QWX2|A7QWX2_VITVI 60S ribosomal protein L6 OS=Vitis vinifer...   184   3e-45
tr|Q9M3Z0|Q9M3Z0_CICAR 60S ribosomal protein L6 OS=Cicer arietin...   182   2e-44
tr|A9QW58|A9QW58_PANQU 60S ribosomal protein L6 OS=Panax quinque...   181   4e-44
tr|B7FH81|B7FH81_MEDTR Putative uncharacterized protein OS=Medic...   181   5e-44
tr|A9PA44|A9PA44_POPTR 60S ribosomal protein L6 OS=Populus trich...   181   5e-44
tr|Q8L9N4|Q8L9N4_ARATH 60S ribosomal protein L6 OS=Arabidopsis t...   180   6e-44
tr|A9P9M3|A9P9M3_POPTR 60S ribosomal protein L6 OS=Populus trich...   177   5e-43
tr|B6SHW0|B6SHW0_MAIZE 60S ribosomal protein L6 OS=Zea mays PE=2...   161   3e-38
tr|B4F9G6|B4F9G6_MAIZE 60S ribosomal protein L6 OS=Zea mays PE=2...   161   3e-38
tr|Q7XR19|Q7XR19_ORYSJ 60S ribosomal protein L6 OS=Oryza sativa ...   160   8e-38
tr|Q0JCF8|Q0JCF8_ORYSJ 60S ribosomal protein L6 (Fragment) OS=Or...   160   8e-38
tr|Q01IK4|Q01IK4_ORYSA 60S ribosomal protein L6 OS=Oryza sativa ...   160   8e-38
tr|B8AVI5|B8AVI5_ORYSI Putative uncharacterized protein OS=Oryza...   160   8e-38
tr|Q5KU23|Q5KU23_CHAGO 60S ribosomal protein L6 (Fragment) OS=Ch...   159   1e-37
tr|A8HP90|A8HP90_CHLRE 60S ribosomal protein L6 OS=Chlamydomonas...   158   2e-37
tr|Q6YY64|Q6YY64_ORYSJ 60S ribosomal protein L6 OS=Oryza sativa ...   155   2e-36
tr|A3A8J3|A3A8J3_ORYSJ 60S ribosomal protein L6 OS=Oryza sativa ...   155   2e-36
tr|A2X6N1|A2X6N1_ORYSI 60S ribosomal protein L6 OS=Oryza sativa ...   155   2e-36
tr|Q5I7L4|Q5I7L4_WHEAT 60S ribosomal protein L6 OS=Triticum aest...   155   3e-36

>tr|A9S9Y8|A9S9Y8_PHYPA 60S ribosomal protein L6 OS=Physcomitrella
           patens subsp. patens GN=PHYPADRAFT_106052 PE=3 SV=1
          Length = 228

 Score =  200 bits (509), Expect = 6e-50
 Identities = 103/181 (56%), Positives = 124/181 (68%), Gaps = 1/181 (0%)
 Frame = +1

Query: 118 YHKRGLWAIKAKHGGSFPTHXXXXXXXXXXXXXXXXXXXDDVPKPLCNKRVIKKTKIRAS 297
           YHKRGLWAIKAK+GG FP+H                   DDVPKPL   +V+   ++R+S
Sbjct: 24  YHKRGLWAIKAKNGGKFPSHEKKAVAAAPAVRAPKFYPADDVPKPLHKNKVVNAPRLRSS 83

Query: 298 ITPGTVLILLAGHFKGKRAVFLKQLDSGLLLVTGPFKLNGVPLRRVNQAYVIATSTKLDV 477
           ITPGTVLILLAGHFKGKR VFLKQL+SGLLLVTGPFK+NGVPLRRVNQAYVIATSTK+D+
Sbjct: 84  ITPGTVLILLAGHFKGKRVVFLKQLESGLLLVTGPFKVNGVPLRRVNQAYVIATSTKVDI 143

Query: 478 SSVDASKISDSY-XXXXXXXXXXXXXXXXXXXXXXXXXVPAEKKEEQKAVDSKLLAVVES 654
           SSVD +K SDSY                          +P EKKE+QKA+D+KL+ ++E+
Sbjct: 144 SSVDVAKFSDSYFKREVAKKTKGESEFFEAEKANEAQTIPEEKKEDQKAIDAKLIPLIEA 203

Query: 655 I 657
           +
Sbjct: 204 V 204


>tr|A9NNE0|A9NNE0_PICSI 60S ribosomal protein L6 OS=Picea sitchensis
           PE=2 SV=1
          Length = 231

 Score =  200 bits (509), Expect = 6e-50
 Identities = 105/196 (53%), Positives = 124/196 (63%)
 Frame = +1

Query: 70  NKEXXXXXXXXXXXXXYHKRGLWAIKAKHGGSFPTHXXXXXXXXXXXXXXXXXXXDDVPK 249
           NKE             YHKRG+WA+K K+GGSFP H                   +DVPK
Sbjct: 12  NKELIRGVGRFSRSKMYHKRGIWALKEKNGGSFPQHAKQPQVPKADEKAPKFYPAEDVPK 71

Query: 250 PLCNKRVIKKTKIRASITPGTVLILLAGHFKGKRAVFLKQLDSGLLLVTGPFKLNGVPLR 429
           PL N+R  K TK+R+SITPGTVLILLAG FKGKR VFLKQL+SGLLL+TGPFKLNGVP+R
Sbjct: 72  PLINRRKPKPTKLRSSITPGTVLILLAGRFKGKRVVFLKQLESGLLLITGPFKLNGVPIR 131

Query: 430 RVNQAYVIATSTKLDVSSVDASKISDSYXXXXXXXXXXXXXXXXXXXXXXXXXVPAEKKE 609
           RVNQAYVIATSTK+DVSS+DASK +D Y                         +P EKKE
Sbjct: 132 RVNQAYVIATSTKIDVSSIDASKFTDKYFEKELIRKKKTESEFFEAEKEEKKTLPTEKKE 191

Query: 610 EQKAVDSKLLAVVESI 657
           +QK +D ++L  VES+
Sbjct: 192 DQKVLDVEVLKAVESV 207


>tr|A9SVY6|A9SVY6_PHYPA 60S ribosomal protein L6 OS=Physcomitrella
           patens subsp. patens GN=PHYPADRAFT_136200 PE=3 SV=1
          Length = 230

 Score =  200 bits (508), Expect = 7e-50
 Identities = 103/180 (57%), Positives = 123/180 (68%)
 Frame = +1

Query: 118 YHKRGLWAIKAKHGGSFPTHXXXXXXXXXXXXXXXXXXXDDVPKPLCNKRVIKKTKIRAS 297
           YHKRGLWAIKAK+GG FPTH                   DDV KPL   +VI   K+R+S
Sbjct: 27  YHKRGLWAIKAKNGGKFPTHEKAAVAAAPAVRAPKFYPADDVSKPLHKNKVINAPKLRSS 86

Query: 298 ITPGTVLILLAGHFKGKRAVFLKQLDSGLLLVTGPFKLNGVPLRRVNQAYVIATSTKLDV 477
           ITPGTVLILLAG+FKGKR VFLKQL+SGLLLVTGPFK+NGVPLRRVNQAYVIATSTK+D+
Sbjct: 87  ITPGTVLILLAGNFKGKRVVFLKQLESGLLLVTGPFKVNGVPLRRVNQAYVIATSTKVDI 146

Query: 478 SSVDASKISDSYXXXXXXXXXXXXXXXXXXXXXXXXXVPAEKKEEQKAVDSKLLAVVESI 657
           SSVD +K SD+Y                         +P EKKE+QKA+D+KL+ ++E++
Sbjct: 147 SSVDVAKYSDAYFKREVAKKKKGEAEFFEAEKDVSKSLPEEKKEDQKAIDAKLIPLIEAV 206


>tr|A9NZV1|A9NZV1_PICSI 60S ribosomal protein L6 OS=Picea sitchensis
           PE=2 SV=1
          Length = 231

 Score =  200 bits (508), Expect = 7e-50
 Identities = 106/196 (54%), Positives = 123/196 (62%)
 Frame = +1

Query: 70  NKEXXXXXXXXXXXXXYHKRGLWAIKAKHGGSFPTHXXXXXXXXXXXXXXXXXXXDDVPK 249
           NKE             YHKRG+WA+K K+GGSFP H                   DD PK
Sbjct: 12  NKELIRGVGRFSRSKMYHKRGIWALKEKNGGSFPRHDKQPPQAKAVEKAPKFYPADDEPK 71

Query: 250 PLCNKRVIKKTKIRASITPGTVLILLAGHFKGKRAVFLKQLDSGLLLVTGPFKLNGVPLR 429
           PL NKR  K TK+R+SITPGTVLILLAG FKGKR VFLKQL+SGLLLVTGPFKLNGVP+R
Sbjct: 72  PLINKRKPKPTKLRSSITPGTVLILLAGRFKGKRVVFLKQLESGLLLVTGPFKLNGVPIR 131

Query: 430 RVNQAYVIATSTKLDVSSVDASKISDSYXXXXXXXXXXXXXXXXXXXXXXXXXVPAEKKE 609
           RVNQAYVIATSTK+D+S+VDASK +D Y                         +P EKKE
Sbjct: 132 RVNQAYVIATSTKIDISTVDASKFTDKYFEKEVVRKKKTESDFFEAEKEDKKTLPTEKKE 191

Query: 610 EQKAVDSKLLAVVESI 657
           +QK +D+ +L  VES+
Sbjct: 192 DQKVLDAVVLQAVESV 207


>tr|A9NLS7|A9NLS7_PICSI 60S ribosomal protein L6 OS=Picea sitchensis
           PE=2 SV=1
          Length = 231

 Score =  200 bits (508), Expect = 7e-50
 Identities = 106/196 (54%), Positives = 123/196 (62%)
 Frame = +1

Query: 70  NKEXXXXXXXXXXXXXYHKRGLWAIKAKHGGSFPTHXXXXXXXXXXXXXXXXXXXDDVPK 249
           NKE             YHKRG+WA+K K+GGSFP H                   DD PK
Sbjct: 12  NKELIRGVGRFSRSKMYHKRGIWALKEKNGGSFPRHDKQPPQAKAVEKAPKFYPADDEPK 71

Query: 250 PLCNKRVIKKTKIRASITPGTVLILLAGHFKGKRAVFLKQLDSGLLLVTGPFKLNGVPLR 429
           PL NKR  K TK+R+SITPGTVLILLAG FKGKR VFLKQL+SGLLLVTGPFKLNGVP+R
Sbjct: 72  PLINKRKPKPTKLRSSITPGTVLILLAGRFKGKRVVFLKQLESGLLLVTGPFKLNGVPIR 131

Query: 430 RVNQAYVIATSTKLDVSSVDASKISDSYXXXXXXXXXXXXXXXXXXXXXXXXXVPAEKKE 609
           RVNQAYVIATSTK+D+S+VDASK +D Y                         +P EKKE
Sbjct: 132 RVNQAYVIATSTKIDISTVDASKFTDKYFEKEVVRKKKTESEFFEAEKEDKKTLPTEKKE 191

Query: 610 EQKAVDSKLLAVVESI 657
           +QK +D+ +L  VES+
Sbjct: 192 DQKVLDAVVLQAVESV 207


>tr|A9SVY4|A9SVY4_PHYPA 60S ribosomal protein L6 OS=Physcomitrella
           patens subsp. patens GN=PHYPADRAFT_136081 PE=3 SV=1
          Length = 230

 Score =  199 bits (507), Expect = 1e-49
 Identities = 102/180 (56%), Positives = 123/180 (68%)
 Frame = +1

Query: 118 YHKRGLWAIKAKHGGSFPTHXXXXXXXXXXXXXXXXXXXDDVPKPLCNKRVIKKTKIRAS 297
           YHKRGLWAIKAK+GG FPTH                   DDV KPL   +V+   K+R+S
Sbjct: 27  YHKRGLWAIKAKNGGKFPTHEKAAVAAAPAVRAPKFYPADDVAKPLHKNKVVNAPKLRSS 86

Query: 298 ITPGTVLILLAGHFKGKRAVFLKQLDSGLLLVTGPFKLNGVPLRRVNQAYVIATSTKLDV 477
           ITPGTVLILLAG+FKGKR VFLKQL+SGLLLVTGPFK+NGVPLRRVNQAYVIATSTK+D+
Sbjct: 87  ITPGTVLILLAGNFKGKRVVFLKQLESGLLLVTGPFKVNGVPLRRVNQAYVIATSTKVDI 146

Query: 478 SSVDASKISDSYXXXXXXXXXXXXXXXXXXXXXXXXXVPAEKKEEQKAVDSKLLAVVESI 657
           SSVD +K SD+Y                         +P EKKE+QKA+D+KL+ ++E++
Sbjct: 147 SSVDVAKYSDAYFKREVAKKKKGEAEFFEAEKDVSKSLPEEKKEDQKAIDAKLIPLIEAV 206


>tr|A9NZI5|A9NZI5_PICSI 60S ribosomal protein L6 OS=Picea sitchensis
           PE=2 SV=1
          Length = 231

 Score =  197 bits (502), Expect = 4e-49
 Identities = 105/196 (53%), Positives = 122/196 (62%)
 Frame = +1

Query: 70  NKEXXXXXXXXXXXXXYHKRGLWAIKAKHGGSFPTHXXXXXXXXXXXXXXXXXXXDDVPK 249
           NKE             YHKRG+WA+K K+GGSFP H                   DD PK
Sbjct: 12  NKELIRGVGRFSRSKMYHKRGIWALKEKNGGSFPRHDKQPPQAKAVEKAPKFYPADDEPK 71

Query: 250 PLCNKRVIKKTKIRASITPGTVLILLAGHFKGKRAVFLKQLDSGLLLVTGPFKLNGVPLR 429
           PL NKR  K TK+R+SITPGTVLILLAG FKGKR VFLKQL+SGLLLVTGPFKLNGVP+R
Sbjct: 72  PLINKRKPKPTKLRSSITPGTVLILLAGRFKGKRVVFLKQLESGLLLVTGPFKLNGVPIR 131

Query: 430 RVNQAYVIATSTKLDVSSVDASKISDSYXXXXXXXXXXXXXXXXXXXXXXXXXVPAEKKE 609
           RVNQAYVIATSTK+D+S+VDASK +D Y                         +P EKKE
Sbjct: 132 RVNQAYVIATSTKIDISTVDASKFTDKYFEKEVVRKKKTESEFFEAEKEDKKTLPTEKKE 191

Query: 610 EQKAVDSKLLAVVESI 657
           +Q  +D+ +L  VES+
Sbjct: 192 DQTVLDAVVLQAVESV 207


>tr|A9RUW5|A9RUW5_PHYPA 60S ribosomal protein L6 OS=Physcomitrella
           patens subsp. patens GN=PHYPADRAFT_178335 PE=3 SV=1
          Length = 231

 Score =  195 bits (496), Expect = 2e-48
 Identities = 104/181 (57%), Positives = 121/181 (66%), Gaps = 1/181 (0%)
 Frame = +1

Query: 118 YHKRGLWAIKAKHGGSFPTHXXXXXXXXXXXXXXXXXXXDDVPKPLCNKRVIKKTKIRAS 297
           YHKRGLWAIKAK+GG FP H                   DDV KPL   +VI   K+R+S
Sbjct: 27  YHKRGLWAIKAKNGGKFPIHEKKAVAETPAVRAPKFYPADDVAKPLHKNKVINPPKLRSS 86

Query: 298 ITPGTVLILLAGHFKGKRAVFLKQLDSGLLLVTGPFKLNGVPLRRVNQAYVIATSTKLDV 477
           ITPGTVLILLAG FKGKR VFLKQL+SGLLLVTGPFK+NGVPLRRVNQAYVIATSTKLDV
Sbjct: 87  ITPGTVLILLAGQFKGKRVVFLKQLESGLLLVTGPFKVNGVPLRRVNQAYVIATSTKLDV 146

Query: 478 SSVDASKISDSY-XXXXXXXXXXXXXXXXXXXXXXXXXVPAEKKEEQKAVDSKLLAVVES 654
           SSVD +K SD+Y                          +P EKKE+QKA+D+KL+ ++E+
Sbjct: 147 SSVDVTKFSDAYFKREVTKKKKGETEFFEAEKENEGNTLPEEKKEDQKAIDAKLIPIIEA 206

Query: 655 I 657
           +
Sbjct: 207 V 207


>tr|A7PVT5|A7PVT5_VITVI 60S ribosomal protein L6 OS=Vitis vinifera
           GN=GSVIVT00025349001 PE=3 SV=1
          Length = 231

 Score =  192 bits (489), Expect = 1e-47
 Identities = 100/180 (55%), Positives = 115/180 (63%)
 Frame = +1

Query: 118 YHKRGLWAIKAKHGGSFPTHXXXXXXXXXXXXXXXXXXXDDVPKPLCNKRVIKKTKIRAS 297
           YHKRGLWAIKAK+GG FP H                   DDV KPL NK   K TK+RAS
Sbjct: 28  YHKRGLWAIKAKNGGVFPCHEKKPVAPAPLEKLPKFYPADDVKKPLINKHKAKPTKLRAS 87

Query: 298 ITPGTVLILLAGHFKGKRAVFLKQLDSGLLLVTGPFKLNGVPLRRVNQAYVIATSTKLDV 477
           ITPGTVLI+LAG FKGKR VFLKQL SGLLL+TGPFK+NGVPLRRVNQAYVIATSTK+D+
Sbjct: 88  ITPGTVLIILAGRFKGKRVVFLKQLSSGLLLITGPFKINGVPLRRVNQAYVIATSTKVDI 147

Query: 478 SSVDASKISDSYXXXXXXXXXXXXXXXXXXXXXXXXXVPAEKKEEQKAVDSKLLAVVESI 657
           S V+  K  D Y                         +P EKK++QKAVD+ L+A +E +
Sbjct: 148 SKVNVEKFDDKYFAKEVQKKKKGEGEFFEAEKEEKKDLPQEKKDDQKAVDASLIASIEGV 207


>tr|B7FH28|B7FH28_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 233

 Score =  191 bits (486), Expect = 3e-47
 Identities = 104/181 (57%), Positives = 116/181 (64%), Gaps = 1/181 (0%)
 Frame = +1

Query: 118 YHKRGLWAIKAKHGGSFPTHXXXXXXXXXXXXXXXXXXXDDVPKPLCNKRVIKKTKIRAS 297
           YHKRGLWAIKAKHGG+FP H                   DDV KPL NK   K TK+RAS
Sbjct: 29  YHKRGLWAIKAKHGGAFPRHDPVAKPAAPVEKPPKFYPADDVKKPLRNKHKPKPTKLRAS 88

Query: 298 ITPGTVLILLAGHFKGKRAVFLKQLDSGLLLVTGPFKLNGVPLRRVNQAYVIATSTKLDV 477
           ITPGTVLILLAG FKGKR VFLKQL SGLLLVTGPFK+NGVPLRRVNQAYVI TSTK+D+
Sbjct: 89  ITPGTVLILLAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQAYVIGTSTKVDI 148

Query: 478 SSVDASKISDSYXXXXXXXXXXXXXXXXXXXXXXXXXV-PAEKKEEQKAVDSKLLAVVES 654
           SSV+A K  D Y                         V P EKK++QK VD+ LL  ++S
Sbjct: 149 SSVNADKFDDKYFSKESQKKTKKGEGEFFEADKEDKKVLPQEKKDDQKTVDAGLLKAIDS 208

Query: 655 I 657
           +
Sbjct: 209 V 209