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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK957531
Clone id TST39A01NGRL0028_J21
Library
Length 582
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0028_J21. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
TGCAGATAAGTCTATTTGCTCGGAAATCAATACAGTCAGGTTAAACTATATATCCTCTGC
GTCATCCAATATCTGTGTCAAGTCTCTTGGTAAGGATGTGAAAGCCTTGAGATCACAATT
TGGCATGGATATACTTACTGACTTGGGCTGGGCCTTAAAATACATCACTCGGCCTCTTCC
TGTTGACAAGTTTGAACTGAGGGAAGCTTTGATCGATCGGCTTCAAACCTTGCACTTGTT
TTCTTTGGAGCATCGCTGCCATGCGGTCGCACGTCTTGTTCAGACAGCCGTCGGTAATTT
CATTCAAGGTGGTAATGTGCGGAACACTCCCGAAATGCTGAAGGGCATGAAAGCCTTAAA
TATTTCTGGTAGGCTCCATTTTTCTAAGGGGACAGCAGTAAAAGGCCAACTCACTCCGAG
ATCGGCCGCCGATGATGATAGCATTCAAGCAGTCGACAAGCCAAATAAGATCAAGGGGTT
ACAAGGACCAAAATGTGCACAACAGCAGGTGCATCTTACCCGAAGGAGTGAACTAGCCGA
AGGCGGTCACGACAGTAAGATGGACATTTTTACCAATAGAAG
■■Homology search results ■■ -
sp_hit_id Q75LH6
Definition sp|Q75LH6|SPL6_ORYSJ Squamosa promoter-binding-like protein 6 OS=Oryza sativa subsp. japonica
Align length 93
Score (bit) 32.0
E-value 2.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK957531|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0028_J21, 5'
         (582 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q75LH6|SPL6_ORYSJ Squamosa promoter-binding-like protein 6 OS...    32   2.3  
sp|O15131|IMA5_HUMAN Importin subunit alpha-6 OS=Homo sapiens GN...    30   8.7  

>sp|Q75LH6|SPL6_ORYSJ Squamosa promoter-binding-like protein 6
           OS=Oryza sativa subsp. japonica GN=SPL6 PE=2 SV=1
          Length = 969

 Score = 32.0 bits (71), Expect = 2.3
 Identities = 26/93 (27%), Positives = 42/93 (45%)
 Frame = +2

Query: 2   ADKSICSEINTVRLNYISSASSNICVKSLGKDVKALRSQFGMDILTDLGWALKYITRPLP 181
           A++ ICSE+  +   + SS+           D    R+Q  ++ L +LGW L        
Sbjct: 646 AEQDICSEVCELESIFESSSHEQA-------DDDNARNQ-ALEFLNELGWLLHRANIISK 697

Query: 182 VDKFELREALIDRLQTLHLFSLEHRCHAVARLV 280
            DK  L    I R + L +F++E    AV +L+
Sbjct: 698 QDKVPLASFNIWRFRNLGIFAMEREWCAVTKLL 730


>sp|O15131|IMA5_HUMAN Importin subunit alpha-6 OS=Homo sapiens
           GN=KPNA5 PE=1 SV=1
          Length = 536

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
 Frame = +2

Query: 128 DILTDLGWALKYITRPLPVDKFELREALIDRLQTLHLFS-LEHRCHAVARLVQTAVGNFI 304
           D+L D+ WAL Y++   P DK    +A+ID      L   L H  + V      AVGN +
Sbjct: 267 DVLADVCWALSYLSDG-PNDKI---QAVIDSGVCRRLVELLMHNDYKVVSPALRAVGNIV 322

Query: 305 QGGNVR 322
            G +++
Sbjct: 323 TGDDIQ 328
tr_hit_id B5XKX8
Definition tr|B5XKX8|B5XKX8_STRPZ Putative transcriptional repressor OS=Streptococcus pyogenes serotype M49 (strain NZ131)
Align length 69
Score (bit) 36.2
E-value 1.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK957531|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0028_J21, 5'
         (582 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B5XKX8|B5XKX8_STRPZ Putative transcriptional repressor OS=Str...    36   1.4  
tr|A9L0E3|A9L0E3_SHEB9 Putative uncharacterized protein OS=Shewa...    36   1.4  
tr|A6WMV9|A6WMV9_SHEB8 Putative uncharacterized protein OS=Shewa...    36   1.4  
tr|B8E5A9|B8E5A9_9GAMM Putative uncharacterized protein OS=Shewa...    36   1.4  
tr|B8P8C6|B8P8C6_9APHY Predicted protein OS=Postia placenta Mad-...    36   1.8  
tr|Q081R8|Q081R8_SHEFN Putative uncharacterized protein OS=Shewa...    35   2.3  
tr|B1KEJ4|B1KEJ4_SHEWM Putative uncharacterized protein OS=Shewa...    35   2.3  
tr|A8FVQ3|A8FVQ3_SHESH Putative uncharacterized protein OS=Shewa...    35   2.3  
tr|Q8DUN4|Q8DUN4_STRMU Putative transcriptional regulator of sug...    35   3.0  
tr|Q12MY6|Q12MY6_SHEDO Putative uncharacterized protein OS=Shewa...    35   3.0  
tr|Q8KWU1|Q8KWU1_STRMU Putative uncharacterized protein fxpA OS=...    35   3.0  
tr|Q1LZ61|Q1LZ61_STRMU FruR OS=Streptococcus mutans UA159 GN=fru...    35   3.0  
tr|B1QSK9|B1QSK9_CLOBU Lactose phosphotransferase system repress...    35   3.0  
tr|B3RL91|B3RL91_TRIAD Putative uncharacterized protein OS=Trich...    34   5.2  
tr|B6JZL3|B6JZL3_SCHJP Palmitoyl-protein thioesterase OS=Schizos...    34   6.8  
tr|Q0RK81|Q0RK81_FRAAA Putative TetR-family transcriptional regu...    33   8.8  
tr|B3CVM3|B3CVM3_ORITI Putative uncharacterized protein OS=Orien...    33   8.8  
tr|A8AX90|A8AX90_STRGC Phosphotransferase system repressor OS=St...    33   8.8  

>tr|B5XKX8|B5XKX8_STRPZ Putative transcriptional repressor
           OS=Streptococcus pyogenes serotype M49 (strain NZ131)
           GN=fruR PE=4 SV=1
          Length = 237

 Score = 36.2 bits (82), Expect = 1.4
 Identities = 22/69 (31%), Positives = 35/69 (50%)
 Frame = +2

Query: 182 VDKFELREALIDRLQTLHLFSLEHRCHAVARLVQTAVGNFIQGGNVRNTPEMLKGMKALN 361
           +D     E L+  LQ  +L  + +  H  ARLV+ ++   I GG+V+ T E   G  AL 
Sbjct: 88  IDAGTTTEFLLPFLQAKNLTVVTNSIHHAARLVELSIETIIVGGDVKQTTEASIGNVALE 147

Query: 362 ISGRLHFSK 388
              +++F K
Sbjct: 148 QIRQMNFDK 156


>tr|A9L0E3|A9L0E3_SHEB9 Putative uncharacterized protein
           OS=Shewanella baltica (strain OS195) GN=Sbal195_2053
           PE=3 SV=1
          Length = 590

 Score = 36.2 bits (82), Expect = 1.4
 Identities = 34/125 (27%), Positives = 50/125 (40%), Gaps = 11/125 (8%)
 Frame = +2

Query: 110 RSQFGMDILTDLGWALKYITRPLPVDKFELREALIDRLQTLHLFSLEHRCHAVARLVQTA 289
           R Q  M  +TD  W  KY T P P D       LID+L T H+   +   + V + +   
Sbjct: 288 RVQGEMAKITDKLWP-KYFTTPKPADSKLAIRQLIDKLSTQHV-QRDEFVNEVRKQIPEL 345

Query: 290 VGNFIQGGN-----------VRNTPEMLKGMKALNISGRLHFSKGTAVKGQLTPRSAADD 436
           +  F+   N           VR TPE ++G    +IS    + K       +TP     D
Sbjct: 346 I-EFVNKKNLVTLDPKKPLVVRETPEYMRGYAGASISAPGPYDKSGNTYYNVTPLDGMSD 404

Query: 437 DSIQA 451
            S ++
Sbjct: 405 ASAES 409


>tr|A6WMV9|A6WMV9_SHEB8 Putative uncharacterized protein
           OS=Shewanella baltica (strain OS185) GN=Shew185_2005
           PE=3 SV=1
          Length = 590

 Score = 36.2 bits (82), Expect = 1.4
 Identities = 34/125 (27%), Positives = 50/125 (40%), Gaps = 11/125 (8%)
 Frame = +2

Query: 110 RSQFGMDILTDLGWALKYITRPLPVDKFELREALIDRLQTLHLFSLEHRCHAVARLVQTA 289
           R Q  M  +TD  W  KY T P P D       LID+L T H+   +   + V + +   
Sbjct: 288 RVQGEMAKITDKLWP-KYFTTPKPADSKLAIRQLIDKLSTQHV-QRDEFVNEVRKQIPEL 345

Query: 290 VGNFIQGGN-----------VRNTPEMLKGMKALNISGRLHFSKGTAVKGQLTPRSAADD 436
           +  F+   N           VR TPE ++G    +IS    + K       +TP     D
Sbjct: 346 I-EFVNKKNLVTLDPKKPLVVRETPEYMRGYAGASISAPGPYDKSGNTYYNVTPLDGMSD 404

Query: 437 DSIQA 451
            S ++
Sbjct: 405 ASAES 409


>tr|B8E5A9|B8E5A9_9GAMM Putative uncharacterized protein
           OS=Shewanella baltica OS223 GN=Sbal223_2334 PE=3 SV=1
          Length = 590

 Score = 36.2 bits (82), Expect = 1.4
 Identities = 34/125 (27%), Positives = 50/125 (40%), Gaps = 11/125 (8%)
 Frame = +2

Query: 110 RSQFGMDILTDLGWALKYITRPLPVDKFELREALIDRLQTLHLFSLEHRCHAVARLVQTA 289
           R Q  M  +TD  W  KY T P P D       LID+L T H+   +   + V + +   
Sbjct: 288 RVQGEMAKITDKLWP-KYFTTPKPADSKLAIRQLIDKLSTQHV-QRDEFVNEVRKQIPEL 345

Query: 290 VGNFIQGGN-----------VRNTPEMLKGMKALNISGRLHFSKGTAVKGQLTPRSAADD 436
           +  F+   N           VR TPE ++G    +IS    + K       +TP     D
Sbjct: 346 I-EFVNKKNLVTLDPKKPLVVRETPEYMRGYAGASISAPGPYDKSGNTYYNVTPLDGMSD 404

Query: 437 DSIQA 451
            S ++
Sbjct: 405 ASAES 409


>tr|B8P8C6|B8P8C6_9APHY Predicted protein OS=Postia placenta
           Mad-698-R GN=POSPLDRAFT_104651 PE=4 SV=1
          Length = 236

 Score = 35.8 bits (81), Expect = 1.8
 Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
 Frame = +2

Query: 308 GGNVRNTPEMLKGMKALNISGRLHFSKGTAVKGQLTPRSAADDDSIQAVDKPNKIKGLQG 487
           G +VRN+P  +  +  L+ +   H S    +     P   AD D+  + D  N+ KG Q 
Sbjct: 31  GSSVRNSPRQVPPLSGLSTTQMKHLSDDGPLP---LPNLPADIDNKNSGDSGNQNKGGQT 87

Query: 488 P---KCAQQQVHLTRRSELAE--GGHDSK 559
           P   + A+QQ+H    + L +   GHD +
Sbjct: 88  PDGRRAAEQQLHNPASASLDDYYSGHDKR 116


>tr|Q081R8|Q081R8_SHEFN Putative uncharacterized protein
           OS=Shewanella frigidimarina (strain NCIMB 400)
           GN=Sfri_2151 PE=3 SV=1
          Length = 599

 Score = 35.4 bits (80), Expect = 2.3
 Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 14/120 (11%)
 Frame = +2

Query: 134 LTDLGWALKYITRPLPVDKFELREALIDRLQTLHLFSLEHRCHAVARLVQTAVGNFIQGG 313
           +TD  W+ KYI  P P D+ +    LID L T H+     R + VA  V+  +   I+  
Sbjct: 305 ITDTIWS-KYIDTPKPDDERQAIRQLIDVLSTKHV----KRENFVAE-VRKQIPELIKFV 358

Query: 314 N--------------VRNTPEMLKGMKALNISGRLHFSKGTAVKGQLTPRSAADDDSIQA 451
           N              VR TPE ++G    +IS    + KG      ++P     D+S ++
Sbjct: 359 NDKQLVTLDPKKPLIVRETPEYMRGFAGASISAPGPYDKGGNTYYNVSPLDDMSDESAES 418


>tr|B1KEJ4|B1KEJ4_SHEWM Putative uncharacterized protein
           OS=Shewanella woodyi (strain ATCC 51908 / MS32)
           GN=Swoo_2293 PE=3 SV=1
          Length = 591

 Score = 35.4 bits (80), Expect = 2.3
 Identities = 32/126 (25%), Positives = 52/126 (41%), Gaps = 11/126 (8%)
 Frame = +2

Query: 107 LRSQFGMDILTDLGWALKYITRPLPVDKFELREALIDRLQTLHLFSLEHRCHAVARLVQT 286
           LR Q  M  +T   W+ KY   P P D+ +    LID+L   H+   +      A++ + 
Sbjct: 288 LRVQTEMAKITTQLWS-KYFDTPQPKDQNKATRQLIDKLSAKHVKREDFVDEVRAQIPEL 346

Query: 287 AVGNFIQGGN-----------VRNTPEMLKGMKALNISGRLHFSKGTAVKGQLTPRSAAD 433
               F+   N           VR TP  ++G    +IS    + K +     +TP  A D
Sbjct: 347 V--KFVNEKNLVTLNPEKPLVVRETPAYMRGFAGASISAPGPYEKSSNTYYNVTPLDAMD 404

Query: 434 DDSIQA 451
            +S ++
Sbjct: 405 AESAES 410


>tr|A8FVQ3|A8FVQ3_SHESH Putative uncharacterized protein
           OS=Shewanella sediminis (strain HAW-EB3) GN=Ssed_2317
           PE=3 SV=1
          Length = 592

 Score = 35.4 bits (80), Expect = 2.3
 Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 14/111 (12%)
 Frame = +2

Query: 161 YITRPLPVDKFELREALIDRLQTLHLFSLEHRCHAVARLVQTAVGNFIQGGN-------- 316
           Y   P P+D  +    LID+L + H+     +  A    V+  +   I+  N        
Sbjct: 306 YFDTPKPLDDNKATRQLIDKLSSKHV-----KREAFVDEVRAQIPALIKFVNDKQLVTLD 360

Query: 317 ------VRNTPEMLKGMKALNISGRLHFSKGTAVKGQLTPRSAADDDSIQA 451
                 VR TPE ++G    +IS    + K +     +TP  A DD+S ++
Sbjct: 361 PKKPLVVRETPEYMRGFAGASISAPGPYEKSSNTYYNVTPLDAMDDESAES 411


>tr|Q8DUN4|Q8DUN4_STRMU Putative transcriptional regulator of sugar
           metabolism OS=Streptococcus mutans GN=SMU_870 PE=4 SV=1
          Length = 265

 Score = 35.0 bits (79), Expect = 3.0
 Identities = 26/101 (25%), Positives = 42/101 (41%)
 Frame = +2

Query: 182 VDKFELREALIDRLQTLHLFSLEHRCHAVARLVQTAVGNFIQGGNVRNTPEMLKGMKALN 361
           VD       L+D+L    L  + +  H  A+LV+  +   I GG V+N+ +   G  A+ 
Sbjct: 116 VDAGTTTALLLDQLHAEGLTVVTNSIHHAAKLVEKNINTIIIGGYVKNSTDASIGQLAIM 175

Query: 362 ISGRLHFSKGTAVKGQLTPRSAADDDSIQAVDKPNKIKGLQ 484
              +L+F K       +        D+ +AV K   I   Q
Sbjct: 176 QLSQLNFDKAFVGMNGIDHHFLTTPDTEEAVIKKTVIDNAQ 216


>tr|Q12MY6|Q12MY6_SHEDO Putative uncharacterized protein
           OS=Shewanella denitrificans (strain OS217 / ATCC
           BAA-1090 / DSM 15013) GN=Sden_1907 PE=3 SV=1
          Length = 609

 Score = 35.0 bits (79), Expect = 3.0
 Identities = 32/123 (26%), Positives = 51/123 (41%), Gaps = 11/123 (8%)
 Frame = +2

Query: 116 QFGMDILTDLGWALKYITRPLPVDKFELREALIDRLQTLHLFSLEHRCHAVARLVQTAVG 295
           Q  M  +TD  WA K++  P PVD     +ALID L   H+   +      A++ +    
Sbjct: 309 QAEMAKITDKIWA-KHMKTPKPVDSQLAIKALIDTLSAKHVSRDKFVDEVRAQIPELI-- 365

Query: 296 NFIQGGN-----------VRNTPEMLKGMKALNISGRLHFSKGTAVKGQLTPRSAADDDS 442
            F+   N           VR TPE ++G    +IS    + +       +TP     D+S
Sbjct: 366 KFVNDKNLLTLDPNKPLVVRETPEYMRGFAGASISAPGPYEQAANTYYNVTPLDGMSDES 425

Query: 443 IQA 451
            ++
Sbjct: 426 AES 428